RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CIAPIN1Q6FI81 312 aa8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 IQSEC3Q9UPP2 1182 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 ABCC6O95255 1503 aa8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 SRGAP3O43295 1099 aa8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 WDHD1O75717 1129 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 ITGA6P23229 1130 aa8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 STYK1Q6J9G0 422 aa8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 TMC4Q7Z404 712 aa8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 DBNDD1Q9H9R9 158 aa8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 TBC1D9Q6ZT07 1266 aa8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 PLEKHM2Q8IWE5 1019 aa8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 DCTPP1Q9H773 170 aa8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 VEZTQ9HBM0 779 aa8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 CHMP5Q9NZZ3 219 aa8.97□□□□□ -0.97
CDC42BPA-208ENST00000442054 GNAI2P04899 355 aa8.96□□□□□ -0.97
CDC42BPA-208ENST00000442054 GRAPQ13588 217 aa8.96□□□□□ -0.97
CDC42BPA-208ENST00000442054 GRAPLQ8TC17 118 aaPredicted RBP8.96□□□□□ -0.97
CDC42BPA-208ENST00000442054 JAG2Q9Y219 1238 aa8.96□□□□□ -0.97
CDC42BPA-208ENST00000442054 LMO7Q8WWI1 1683 aa8.96□□□□□ -0.97
CDC42BPA-208ENST00000442054 ZNF804AQ7Z570 1209 aa8.96□□□□□ -0.98
CDC42BPA-208ENST00000442054 LTN1O94822 1766 aa8.96□□□□□ -0.98
CDC42BPA-208ENST00000442054 PCCAP05165 728 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPA-208ENST00000442054 IARSP41252 1262 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-208ENST00000442054 AMIGO3Q86WK7 504 aa8.96□□□□□ -0.98
CDC42BPA-208ENST00000442054 SULF1Q8IWU6 871 aa8.96□□□□□ -0.98
CDC42BPA-208ENST00000442054 DCPSQ96C86 337 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-208ENST00000442054 ALDH1L1O75891 902 aa8.95□□□□□ -0.98
CDC42BPA-208ENST00000442054 SRGNP10124 158 aa8.95□□□□□ -0.98
CDC42BPA-208ENST00000442054 AOC3Q16853 763 aa8.95□□□□□ -0.98
CDC42BPA-208ENST00000442054 CEMIPQ8WUJ3 1361 aa8.95□□□□□ -0.98
CDC42BPA-208ENST00000442054 SLC5A1P13866 664 aa8.95□□□□□ -0.98
CDC42BPA-208ENST00000442054 TM4SF1P30408 202 aa8.95□□□□□ -0.98
CDC42BPA-208ENST00000442054 GRIPAP1Q4V328 841 aa8.95□□□□□ -0.98
CDC42BPA-208ENST00000442054 SEC31BQ9NQW1 1179 aa8.95□□□□□ -0.98
CDC42BPA-208ENST00000442054 GCKRQ14397 625 aa8.95□□□□□ -0.98
CDC42BPA-208ENST00000442054 LNPKQ9C0E8 428 aa8.95□□□□□ -0.98
CDC42BPA-208ENST00000442054 CIZ1Q9ULV3 898 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-208ENST00000442054 RGPD2P0DJD1 1756 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 IBTKQ9P2D0 1353 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 DDNO94850 711 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 IFIT2P09913 472 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 ATP2B4P23634 1241 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 MFAP1P55081 439 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 CTSWP56202 376 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 PRKG1Q13976 671 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 GAS2L3Q86XJ1 694 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 PTPRCP08575 1304 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 TNPO1Q92973 898 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 AIDAQ96BJ3 306 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 GPATCH3Q96I76 525 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 PANK2Q9BZ23 570 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 HACL1Q9UJ83 578 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 PLEKHG2Q9H7P9 1386 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 TAF5LO75529 589 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 YBX3P16989 372 aaKnown RBP eCLIP8.94□□□□□ -0.984e-6■■□□□ 13.6
CDC42BPA-208ENST00000442054 CCDC158Q5M9N0 1113 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 CRAMP1Q96RY5 1269 aa8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 CWC22Q9HCG8 908 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-208ENST00000442054 NEURL1BA8MQ27 555 aa8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 PLCB2Q00722 1185 aa8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 FKBP4Q02790 459 aaKnown RBP eCLIP8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 GTF2IP78347 998 aa8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 HSP90AB4PQ58FF6 505 aa8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 ANKRD44Q8N8A2 993 aa8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 ZNF784Q8NCA9 323 aaPredicted RBP8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 C1orf115Q9H7X2 142 aa8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 RAI14Q9P0K7 980 aa8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 PXDNLA1KZ92 1463 aa8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 TTC39AQ5SRH9 613 aa8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 ZNF34Q8IZ26 560 aa8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 CELF1Q92879 486 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 BCL2L12Q9HB09 334 aa8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 LRP2BPQ9P2M1 347 aa8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 LRRFIP2Q9Y608 721 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-208ENST00000442054 RAD21O60216 631 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 TRAK2O60296 914 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 OLFM4Q6UX06 510 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 DZIP1Q86YF9 867 aaKnown RBP8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 KIAA0825Q8IV33 1275 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 OSBPL3Q9H4L5 887 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 NMRK2Q9NPI5 230 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 TTLL5Q6EMB2 1281 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 CEP85Q6P2H3 762 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 CCAR1Q8IX12 1150 aaKnown RBP8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 ZNF594Q96JF6 807 aaPredicted RBP8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 GPR101Q96P66 508 aaPredicted RBP8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 USP26Q9BXU7 913 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 GREM2Q9H772 168 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 AKAP2Q9Y2D5 859 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 XDHP47989 1333 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 DLGAP5Q15398 846 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 TTC22Q5TAA0 569 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 SAMD1Q6SPF0 538 aaPredicted RBP8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 SP8Q8IXZ3 490 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 CLASRPQ8N2M8 674 aaKnown RBP8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 ZNRF3Q9ULT6 936 aa8.92□□□□□ -0.98
CDC42BPA-208ENST00000442054 EIF5BO60841 1220 aaKnown RBP8.91□□□□□ -0.98
CDC42BPA-208ENST00000442054 TBC1D10BQ4KMP7 808 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-208ENST00000442054 PNMA8AQ86V59 439 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-208ENST00000442054 AMOTL1Q8IY63 956 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms