RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 BTAF1O14981 1849 aa6.94□□□□□ -1.3
PTPN4-206ENST00000441089 TUBGCP6Q96RT7 1819 aa6.94□□□□□ -1.3
PTPN4-206ENST00000441089 COL5A2P05997 1499 aaPredicted RBP6.94□□□□□ -1.3
PTPN4-206ENST00000441089 HSPA1AP0DMV8 641 aaKnown RBP6.94□□□□□ -1.3
PTPN4-206ENST00000441089 HSPA1BP0DMV9 641 aaKnown RBP6.94□□□□□ -1.3
PTPN4-206ENST00000441089 TMEM132EQ6IEE7 984 aa6.94□□□□□ -1.3
PTPN4-206ENST00000441089 MARCH10Q8NA82 808 aaPredicted RBP6.94□□□□□ -1.3
PTPN4-206ENST00000441089 ARMC2Q8NEN0 867 aa6.94□□□□□ -1.3
PTPN4-206ENST00000441089 SCARF2Q96GP6 870 aaPredicted RBP6.94□□□□□ -1.3
PTPN4-206ENST00000441089 POLMQ9NP87 494 aaPredicted RBP6.94□□□□□ -1.3
PTPN4-206ENST00000441089 PGPEP1Q9NXJ5 209 aa6.94□□□□□ -1.3
PTPN4-206ENST00000441089 CD2APQ9Y5K6 639 aa6.94□□□□□ -1.3
PTPN4-206ENST00000441089 TNRC18O15417 2968 aaPredicted RBP6.93□□□□□ -1.3
PTPN4-206ENST00000441089 TNS2Q63HR2 1409 aa6.93□□□□□ -1.3
PTPN4-206ENST00000441089 ADD1P35611 737 aaKnown RBP6.93□□□□□ -1.3
PTPN4-206ENST00000441089 FOXK2Q01167 660 aa6.93□□□□□ -1.3
PTPN4-206ENST00000441089 SRSF11Q05519 484 aaKnown RBP6.93□□□□□ -1.3
PTPN4-206ENST00000441089 ZNF827Q17R98 1081 aa6.93□□□□□ -1.3
PTPN4-206ENST00000441089 ADGRF5Q8IZF2 1346 aa6.93□□□□□ -1.3
PTPN4-206ENST00000441089 GPR25O00155 361 aa6.92□□□□□ -1.3
PTPN4-206ENST00000441089 HTRA3P83110 453 aa6.92□□□□□ -1.3
PTPN4-206ENST00000441089 CTDSPL2Q05D32 466 aa6.92□□□□□ -1.3
PTPN4-206ENST00000441089 PNPLA7Q6ZV29 1317 aa6.92□□□□□ -1.3
PTPN4-206ENST00000441089 KIAA1210Q9ULL0 1709 aa6.91□□□□□ -1.3
PTPN4-206ENST00000441089 LILRA1O75019 489 aa6.91□□□□□ -1.3
PTPN4-206ENST00000441089 SAFB2Q14151 953 aaKnown RBP eCLIP6.91□□□□□ -1.3
PTPN4-206ENST00000441089 SLC27A3Q5K4L6 730 aa6.91□□□□□ -1.3
PTPN4-206ENST00000441089 TOM1L2Q6ZVM7 507 aa6.91□□□□□ -1.3
PTPN4-206ENST00000441089 LRRN4Q8WUT4 740 aa6.91□□□□□ -1.3
PTPN4-206ENST00000441089 PRAM1Q96QH2 718 aa6.91□□□□□ -1.3
PTPN4-206ENST00000441089 TFCP2L1Q9NZI6 479 aa6.91□□□□□ -1.3
PTPN4-206ENST00000441089 POGKQ9P215 609 aa6.91□□□□□ -1.3
PTPN4-206ENST00000441089 PIK3C2GO75747 1445 aa6.91□□□□□ -1.3
PTPN4-206ENST00000441089 TRPM1Q7Z4N2 1603 aa6.9□□□□□ -1.3
PTPN4-206ENST00000441089 PIK3C2AO00443 1686 aa6.9□□□□□ -1.3
PTPN4-206ENST00000441089 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.9□□□□□ -1.3
PTPN4-206ENST00000441089 EXOC5O00471 708 aa6.9□□□□□ -1.3
PTPN4-206ENST00000441089 MSTNO14793 375 aa6.9□□□□□ -1.3
PTPN4-206ENST00000441089 RHOQP17081 205 aa6.9□□□□□ -1.3
PTPN4-206ENST00000441089 MLLT1Q03111 559 aaPredicted RBP6.9□□□□□ -1.3
PTPN4-206ENST00000441089 TUSC1Q2TAM9 212 aa6.9□□□□□ -1.3
PTPN4-206ENST00000441089 ZNF837Q96EG3 531 aaPredicted RBP6.9□□□□□ -1.3
PTPN4-206ENST00000441089 ARHGAP9Q9BRR9 750 aa6.9□□□□□ -1.3
PTPN4-206ENST00000441089 CICQ96RK0 1608 aaPredicted RBP6.9□□□□□ -1.31
PTPN4-206ENST00000441089 NUTM2GQ5VZR2 741 aa6.89□□□□□ -1.31
PTPN4-206ENST00000441089 PDXDC2PQ6P474 469 aa6.89□□□□□ -1.31
PTPN4-206ENST00000441089 NLRP13Q86W25 1043 aa6.89□□□□□ -1.31
PTPN4-206ENST00000441089 CCER1Q8TC90 406 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-206ENST00000441089 SLC10A4Q96EP9 437 aa6.89□□□□□ -1.31
PTPN4-206ENST00000441089 HIRIP3Q9BW71 556 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-206ENST00000441089 NMRK2Q9NPI5 230 aa6.89□□□□□ -1.31
PTPN4-206ENST00000441089 PRDM10Q9NQV6 1147 aa6.89□□□□□ -1.31
PTPN4-206ENST00000441089 LRRC4BQ9NT99 713 aa6.89□□□□□ -1.31
PTPN4-206ENST00000441089 USP19O94966 1318 aa6.89□□□□□ -1.31
PTPN4-206ENST00000441089 PRR36Q9H6K5 1346 aa6.89□□□□□ -1.31
PTPN4-206ENST00000441089 USP6P35125 1406 aa6.89□□□□□ -1.31
PTPN4-206ENST00000441089 CUL9Q8IWT3 2517 aa6.88□□□□□ -1.31
PTPN4-206ENST00000441089 WDR17Q8IZU2 1322 aa6.88□□□□□ -1.31
PTPN4-206ENST00000441089 GCP02774 474 aa6.88□□□□□ -1.31
PTPN4-206ENST00000441089 ABTB2Q8N961 1025 aa6.88□□□□□ -1.31
PTPN4-206ENST00000441089 GPKOWQ92917 476 aaPredicted RBP eCLIP6.88□□□□□ -1.31
PTPN4-206ENST00000441089 ACDQ96AP0 544 aa6.88□□□□□ -1.31
PTPN4-206ENST00000441089 TNRC6CQ9HCJ0 1690 aaKnown RBP6.87□□□□□ -1.31
PTPN4-206ENST00000441089 C10orf71Q711Q0 1435 aa6.87□□□□□ -1.31
PTPN4-206ENST00000441089 PLEKHG2Q9H7P9 1386 aa6.87□□□□□ -1.31
PTPN4-206ENST00000441089 IGSF1Q8N6C5 1336 aa6.87□□□□□ -1.31
PTPN4-206ENST00000441089 WASLO00401 505 aaPredicted RBP6.87□□□□□ -1.31
PTPN4-206ENST00000441089 ADH1AP07327 375 aa6.87□□□□□ -1.31
PTPN4-206ENST00000441089 RAB15P59190 212 aa6.87□□□□□ -1.31
PTPN4-206ENST00000441089 MAP3K10Q02779 954 aa6.87□□□□□ -1.31
PTPN4-206ENST00000441089 NR6A1Q15406 480 aa6.87□□□□□ -1.31
PTPN4-206ENST00000441089 DBN1Q16643 649 aa6.87□□□□□ -1.31
PTPN4-206ENST00000441089 SMC1BQ8NDV3 1235 aa6.87□□□□□ -1.31
PTPN4-206ENST00000441089 HELBQ8NG08 1087 aaPredicted RBP6.87□□□□□ -1.31
PTPN4-206ENST00000441089 MPHOSPH9Q99550 1183 aa6.87□□□□□ -1.31
PTPN4-206ENST00000441089 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
PTPN4-206ENST00000441089 C14orf93Q9H972 538 aaKnown RBP6.87□□□□□ -1.31
PTPN4-206ENST00000441089 FKBPLQ9UIM3 349 aa6.87□□□□□ -1.31
PTPN4-206ENST00000441089 KDM2BQ8NHM5 1336 aa6.86□□□□□ -1.31
PTPN4-206ENST00000441089 HMGB2P26583 209 aaKnown RBP6.86□□□□□ -1.31
PTPN4-206ENST00000441089 PRICKLE2Q7Z3G6 844 aa6.86□□□□□ -1.31
PTPN4-206ENST00000441089 EPS8L1Q8TE68 723 aa6.86□□□□□ -1.31
PTPN4-206ENST00000441089 ACSBG1Q96GR2 724 aa6.86□□□□□ -1.31
PTPN4-206ENST00000441089 CARD10Q9BWT7 1032 aa6.86□□□□□ -1.31
PTPN4-206ENST00000441089 COL18A1P39060 1754 aa6.86□□□□□ -1.31
PTPN4-206ENST00000441089 RGPD5Q99666 1765 aa6.86□□□□□ -1.31
PTPN4-206ENST00000441089 ABCC6O95255 1503 aa6.86□□□□□ -1.31
PTPN4-206ENST00000441089 CCDC7Q96M83 1385 aa6.85□□□□□ -1.31
PTPN4-206ENST00000441089 LY75O60449 1722 aa6.85□□□□□ -1.31
PTPN4-206ENST00000441089 ZBTB7CA1YPR0 619 aa6.85□□□□□ -1.31
PTPN4-206ENST00000441089 ERVH48-1M5A8F1 160 aa6.85□□□□□ -1.31
PTPN4-206ENST00000441089 PTGIRP43119 386 aa6.85□□□□□ -1.31
PTPN4-206ENST00000441089 CLK2P49760 499 aaKnown RBP6.85□□□□□ -1.31
PTPN4-206ENST00000441089 RGS19P49795 217 aa6.85□□□□□ -1.31
PTPN4-206ENST00000441089 DHX9Q08211 1270 aaKnown RBP6.85□□□□□ -1.31
PTPN4-206ENST00000441089 RGL3Q3MIN7 710 aa6.85□□□□□ -1.31
PTPN4-206ENST00000441089 FLAD1Q8NFF5 587 aa6.85□□□□□ -1.31
PTPN4-206ENST00000441089 ADAM32Q8TC27 787 aa6.85□□□□□ -1.31
PTPN4-206ENST00000441089 MBIPQ9NS73 344 aa6.85□□□□□ -1.31
PTPN4-206ENST00000441089 POLR3EQ9NVU0 708 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms