RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 GOLIM4O00461 696 aa29.49■■■□□ 2.31
LMBR1-209ENST00000434453 NEUROD6Q96NK8 337 aa29.49■■■□□ 2.31
LMBR1-209ENST00000434453 GPR108Q9NPR9 543 aa29.49■■■□□ 2.31
LMBR1-209ENST00000434453 LRRC24Q50LG9 513 aa29.48■■■□□ 2.31
LMBR1-209ENST00000434453 PAG1Q9NWQ8 432 aa29.48■■■□□ 2.31
LMBR1-209ENST00000434453 ERVV-2B6SEH9 535 aa29.48■■■□□ 2.31
LMBR1-209ENST00000434453 LRRC2Q9BYS8 371 aa29.48■■■□□ 2.31
LMBR1-209ENST00000434453 LEO1Q8WVC0 666 aaPredicted RBP29.47■■■□□ 2.31
LMBR1-209ENST00000434453 ZNF594Q96JF6 807 aaPredicted RBP29.47■■■□□ 2.31
LMBR1-209ENST00000434453 ZNF830Q96NB3 372 aaPredicted RBP29.47■■■□□ 2.31
LMBR1-209ENST00000434453 SCAND2PQ9GZW5 306 aaPredicted RBP29.47■■■□□ 2.31
LMBR1-209ENST00000434453 ZBTB3Q9H5J0 574 aa29.47■■■□□ 2.31
LMBR1-209ENST00000434453 IL15P40933 162 aaPredicted RBP29.46■■■□□ 2.31
LMBR1-209ENST00000434453 NKX1-1Q15270 411 aaPredicted RBP29.45■■■□□ 2.31
LMBR1-209ENST00000434453 CCDC191Q8NCU4 936 aa29.45■■■□□ 2.31
LMBR1-209ENST00000434453 BRF1Q92994 677 aa29.45■■■□□ 2.31
LMBR1-209ENST00000434453 SPATA32Q96LK8 384 aa29.45■■■□□ 2.31
LMBR1-209ENST00000434453 EYA2O00167 538 aa29.45■■■□□ 2.3
LMBR1-209ENST00000434453 SCRN1Q12765 414 aa29.45■■■□□ 2.3
LMBR1-209ENST00000434453 RESTQ13127 1097 aa29.45■■■□□ 2.3
LMBR1-209ENST00000434453 ZMYM1Q5SVZ6 1142 aa29.45■■■□□ 2.3
LMBR1-209ENST00000434453 TOM1L2Q6ZVM7 507 aa29.45■■■□□ 2.3
LMBR1-209ENST00000434453 BRINP3Q76B58 766 aa29.45■■■□□ 2.3
LMBR1-209ENST00000434453 HELLSQ9NRZ9 838 aa29.45■■■□□ 2.3
LMBR1-209ENST00000434453 COL5A2P05997 1499 aaPredicted RBP29.45■■■□□ 2.3
LMBR1-209ENST00000434453 A0A0G2JLW4 131 aa29.44■■■□□ 2.3
LMBR1-209ENST00000434453 CCDC192P0DO97 292 aa29.44■■■□□ 2.3
LMBR1-209ENST00000434453 PRDM11Q9NQV5 511 aa29.44■■■□□ 2.3
LMBR1-209ENST00000434453 MYH15Q9Y2K3 1946 aa29.44■■■□□ 2.3
LMBR1-209ENST00000434453 KIAA2012Q0VF49 1180 aa29.44■■■□□ 2.3
LMBR1-209ENST00000434453 NUP62CLQ9H1M0 184 aa29.44■■■□□ 2.3
LMBR1-209ENST00000434453 TNS2Q63HR2 1409 aa29.43■■■□□ 2.3
LMBR1-209ENST00000434453 CAMK4Q16566 473 aa29.43■■■□□ 2.3
LMBR1-209ENST00000434453 DSCC1Q9BVC3 393 aa29.43■■■□□ 2.3
LMBR1-209ENST00000434453 SMARCC2Q8TAQ2 1214 aa29.43■■■□□ 2.3
LMBR1-209ENST00000434453 PGBD1Q96JS3 809 aa29.43■■■□□ 2.3
LMBR1-209ENST00000434453 PUS3Q9BZE2 481 aaKnown RBP29.43■■■□□ 2.3
LMBR1-209ENST00000434453 DACT1Q9NYF0 836 aa29.43■■■□□ 2.3
LMBR1-209ENST00000434453 SPEF2Q9C093 1822 aa29.42■■■□□ 2.3
LMBR1-209ENST00000434453 RRP9O43818 475 aaKnown RBP29.42■■■□□ 2.3
LMBR1-209ENST00000434453 HSP90B1P14625 803 aaKnown RBP29.42■■■□□ 2.3
LMBR1-209ENST00000434453 MAP3K11Q16584 847 aa29.42■■■□□ 2.3
LMBR1-209ENST00000434453 DDX11Q96FC9 970 aa29.42■■■□□ 2.3
LMBR1-209ENST00000434453 TTC12Q9H892 705 aaPredicted RBP29.42■■■□□ 2.3
LMBR1-209ENST00000434453 DHX32Q7L7V1 743 aaKnown RBP29.41■■■□□ 2.3
LMBR1-209ENST00000434453 MRVI1Q9Y6F6 885 aa29.41■■■□□ 2.3
LMBR1-209ENST00000434453 A0A1B0GUL7 405 aa29.41■■■□□ 2.3
LMBR1-209ENST00000434453 PFKFB2O60825 505 aa29.41■■■□□ 2.3
LMBR1-209ENST00000434453 CIAO1O76071 339 aa29.4■■■□□ 2.3
LMBR1-209ENST00000434453 EXOSC10Q01780 885 aaKnown RBP29.4■■■□□ 2.3
LMBR1-209ENST00000434453 AGXT2Q9BYV1 514 aa29.4■■■□□ 2.3
LMBR1-209ENST00000434453 MAST3O60307 1309 aa29.4■■■□□ 2.3
LMBR1-209ENST00000434453 CTDNEP1O95476 244 aa29.4■■■□□ 2.3
LMBR1-209ENST00000434453 HSPD1P10809 573 aaKnown RBP29.4■■■□□ 2.3
LMBR1-209ENST00000434453 HSP90AA2PQ14568 343 aaPredicted RBP29.4■■■□□ 2.3
LMBR1-209ENST00000434453 ATG3Q9NT62 314 aa29.4■■■□□ 2.3
LMBR1-209ENST00000434453 HMGB1P09429 215 aaKnown RBP29.39■■■□□ 2.3
LMBR1-209ENST00000434453 RBM43Q6ZSC3 357 aaKnown RBP29.39■■■□□ 2.3
LMBR1-209ENST00000434453 TICAM2Q86XR7 235 aa29.39■■■□□ 2.3
LMBR1-209ENST00000434453 NSUN7Q8NE18 718 aaKnown RBP29.39■■■□□ 2.3
LMBR1-209ENST00000434453 TOGARAM1Q9Y4F4 1720 aa29.39■■■□□ 2.3
LMBR1-209ENST00000434453 TYRO3Q06418 890 aa29.39■■■□□ 2.29
LMBR1-209ENST00000434453 IFIT1P09914 478 aaKnown RBP29.38■■■□□ 2.29
LMBR1-209ENST00000434453 PIBF1Q8WXW3 757 aa29.38■■■□□ 2.29
LMBR1-209ENST00000434453 ISCA1Q9BUE6 129 aa29.38■■■□□ 2.29
LMBR1-209ENST00000434453 CKAP2LQ8IYA6 745 aa29.37■■■□□ 2.29
LMBR1-209ENST00000434453 LLPHQ9BRT6 129 aaKnown RBP29.37■■■□□ 2.29
LMBR1-209ENST00000434453 PLCB2Q00722 1185 aa29.37■■■□□ 2.29
LMBR1-209ENST00000434453 APOBRQ0VD83 1088 aa29.37■■■□□ 2.29
LMBR1-209ENST00000434453 FAM200AQ8TCP9 573 aa29.37■■■□□ 2.29
LMBR1-209ENST00000434453 TNMDQ9H2S6 317 aa29.37■■■□□ 2.29
LMBR1-209ENST00000434453 RNF113AO15541 343 aaKnown RBP29.36■■■□□ 2.29
LMBR1-209ENST00000434453 NR1I2O75469 434 aa29.36■■■□□ 2.29
LMBR1-209ENST00000434453 IL2RBP14784 551 aa29.36■■■□□ 2.29
LMBR1-209ENST00000434453 CLSTN2Q9H4D0 955 aa29.36■■■□□ 2.29
LMBR1-209ENST00000434453 GOLGA6L4A6NEF3 574 aa29.36■■■□□ 2.29
LMBR1-209ENST00000434453 E7EWF7 191 aa29.36■■■□□ 2.29
LMBR1-209ENST00000434453 ADD1P35611 737 aaKnown RBP29.36■■■□□ 2.29
LMBR1-209ENST00000434453 DDX19AQ9NUU7 478 aaKnown RBP29.36■■■□□ 2.29
LMBR1-209ENST00000434453 ABCA3Q99758 1704 aa29.36■■■□□ 2.29
LMBR1-209ENST00000434453 NWD2Q9ULI1 1742 aa29.36■■■□□ 2.29
LMBR1-209ENST00000434453 M0R2C6 588 aa29.35■■■□□ 2.29
LMBR1-209ENST00000434453 FGD1P98174 961 aa29.35■■■□□ 2.29
LMBR1-209ENST00000434453 H3BQV1 296 aa29.35■■■□□ 2.29
LMBR1-209ENST00000434453 IFFO2Q5TF58 517 aa29.35■■■□□ 2.29
LMBR1-209ENST00000434453 CARD10Q9BWT7 1032 aa29.35■■■□□ 2.29
LMBR1-209ENST00000434453 ZSCAN16Q9H4T2 348 aaPredicted RBP29.35■■■□□ 2.29
LMBR1-209ENST00000434453 UQCRHLA0A096LP55 91 aa29.34■■■□□ 2.29
LMBR1-209ENST00000434453 UQCRHP07919 91 aa29.34■■■□□ 2.29
LMBR1-209ENST00000434453 C17orf53Q8N3J3 647 aaPredicted RBP29.34■■■□□ 2.29
LMBR1-209ENST00000434453 OSBP2Q969R2 916 aa29.34■■■□□ 2.29
LMBR1-209ENST00000434453 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.33■■■□□ 2.29
LMBR1-209ENST00000434453 SOS2Q07890 1332 aaPredicted RBP29.33■■■□□ 2.29
LMBR1-209ENST00000434453 SALL1Q9NSC2 1324 aa29.33■■■□□ 2.29
LMBR1-209ENST00000434453 TCIRG1Q13488 830 aa29.33■■■□□ 2.29
LMBR1-209ENST00000434453 TTLL5Q6EMB2 1281 aa29.33■■■□□ 2.29
LMBR1-209ENST00000434453 LUZP1Q86V48 1076 aa29.33■■■□□ 2.29
LMBR1-209ENST00000434453 PTPDC1A2A3K4 754 aa29.32■■■□□ 2.28
LMBR1-209ENST00000434453 FOXP2O15409 715 aa29.32■■■□□ 2.28
LMBR1-209ENST00000434453 ADORA1P30542 326 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 377.6 ms