RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 DDX46Q7L014 1031 aaKnown RBP7.34□□□□□ -1.23
HMGB3P24-201ENST00000433260 ZNF784Q8NCA9 323 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P24-201ENST00000433260 DNAAF4Q8WXU2 420 aa7.34□□□□□ -1.23
HMGB3P24-201ENST00000433260 RNF181Q9P0P0 153 aa7.34□□□□□ -1.23
HMGB3P24-201ENST00000433260 DDX60Q8IY21 1712 aaKnown RBP7.34□□□□□ -1.23
HMGB3P24-201ENST00000433260 NEURL1BA8MQ27 555 aa7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 PPEF1O14829 653 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 PCCAP05165 728 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 GCKRQ14397 625 aa7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 CRY2Q49AN0 593 aa7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 UBE3BQ7Z3V4 1068 aa7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 C7orf43Q8WVR3 580 aa7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 CELF1Q92879 486 aaKnown RBP7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 CRAMP1Q96RY5 1269 aa7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 TMX4Q9H1E5 349 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 SEC31BQ9NQW1 1179 aa7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 SMC4Q9NTJ3 1288 aa7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 NOB1Q9ULX3 412 aaKnown RBP7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 IBTKQ9P2D0 1353 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P24-201ENST00000433260 FER1L6Q2WGJ9 1857 aa7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 ABCC4O15439 1325 aa7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 H7C1W4 665 aa7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 NFKBIEO00221 500 aa7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 PDE8AO60658 829 aa7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 BBOX1O75936 387 aa7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 LMNB1P20700 586 aa7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 SF3B3Q15393 1217 aaKnown RBP7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 CCDC93Q567U6 631 aa7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 PPP1R15BQ5SWA1 713 aa7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 BEND3Q5T5X7 828 aa7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 LINS1Q8NG48 757 aa7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 TAOK3Q9H2K8 898 aa7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 ZNF277Q9NRM2 450 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P24-201ENST00000433260 RNF123Q5XPI4 1314 aa7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 BCAR3O75815 825 aa7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 RPS8P62241 208 aaKnown RBP7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 ALDH1L2Q3SY69 923 aa7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 SOGA3Q5TF21 947 aa7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 SP8Q8IXZ3 490 aa7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 RTKN2Q8IZC4 609 aa7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 TTLL11Q8NHH1 800 aa7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 FRAT1Q92837 279 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 YTHDC1Q96MU7 727 aaKnown RBP7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 SRCIN1Q9C0H9 1055 aa7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 RRAGCQ9HB90 399 aa7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 GPBP1L1Q9HC44 474 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 C9orf78Q9NZ63 289 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 NSFL1CQ9UNZ2 370 aaKnown RBP7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 CHMP3Q9Y3E7 222 aa7.31□□□□□ -1.24
HMGB3P24-201ENST00000433260 NBPF7P0C2Y1 421 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P24-201ENST00000433260 HSP90B1P14625 803 aaKnown RBP7.3□□□□□ -1.24
HMGB3P24-201ENST00000433260 RARSP54136 660 aaKnown RBP7.3□□□□□ -1.24
HMGB3P24-201ENST00000433260 FKBP4Q02790 459 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMGB3P24-201ENST00000433260 GRAPQ13588 217 aa7.3□□□□□ -1.24
HMGB3P24-201ENST00000433260 CCDC152Q4G0S7 254 aa7.3□□□□□ -1.24
HMGB3P24-201ENST00000433260 MPNDQ8N594 471 aa7.3□□□□□ -1.24
HMGB3P24-201ENST00000433260 GRAPLQ8TC17 118 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P24-201ENST00000433260 KCNV2Q8TDN2 545 aa7.3□□□□□ -1.24
HMGB3P24-201ENST00000433260 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.3□□□□□ -1.24
HMGB3P24-201ENST00000433260 ATP6V0A2Q9Y487 856 aa7.3□□□□□ -1.24
HMGB3P24-201ENST00000433260 CDHR2Q9BYE9 1310 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 SPEF2Q9C093 1822 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 MYH3P11055 1940 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 DICER1Q9UPY3 1922 aaKnown RBP7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 COL4A1P02462 1669 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 RIC1Q4ADV7 1423 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 POTEFA5A3E0 1075 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 C6orf229H3BNL8 230 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 TULP1O00294 542 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 RIMBP2O15034 1052 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 ALDH1L1O75891 902 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 IARSP41252 1262 aaKnown RBP7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 CASP7P55210 303 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 CTSWP56202 376 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 GPSM2P81274 684 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 FOXO4P98177 505 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 EPHA10Q5JZY3 1008 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 CC2D2BQ6DHV5 1058 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 DPP8Q6V1X1 898 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 GREM2Q9H772 168 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 NMRK2Q9NPI5 230 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 TNNQ9UQP3 1299 aa7.29□□□□□ -1.24
HMGB3P24-201ENST00000433260 PTPRCP08575 1304 aa7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 ZBED9Q6R2W3 1325 aa7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 WTIPA6NIX2 430 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 GRM8O00222 908 aa7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 DDNO94850 711 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 CT47B1P0C2W7 299 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 ITGA6P23229 1130 aa7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 FOXK1P85037 733 aa7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 AOC3Q16853 763 aa7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 LMBR1LQ6UX01 489 aa7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 ANKRD18AQ8IVF6 992 aa7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 LARGE2Q8N3Y3 721 aa7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 JDP2Q8WYK2 163 aa7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 CLUAP1Q96AJ1 413 aa7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 ZNF594Q96JF6 807 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 GPR101Q96P66 508 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 ANKIB1Q9P2G1 1089 aa7.28□□□□□ -1.24
HMGB3P24-201ENST00000433260 TIAM2Q8IVF5 1701 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms