RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 TPCN1Q9ULQ1 816 aa17.4■□□□□ 0.38
DDX56-205ENST00000433257 MEGF6O75095 1541 aa17.4■□□□□ 0.38
DDX56-205ENST00000433257 MED23Q9ULK4 1368 aa17.4■□□□□ 0.38
DDX56-205ENST00000433257 PARP4Q9UKK3 1724 aaKnown RBP17.4■□□□□ 0.38
DDX56-205ENST00000433257 BTBD11A6QL63 1104 aa17.39■□□□□ 0.37
DDX56-205ENST00000433257 KIF2AO00139 706 aaPredicted RBP17.39■□□□□ 0.37
DDX56-205ENST00000433257 ZNF75DP51815 510 aa17.39■□□□□ 0.37
DDX56-205ENST00000433257 PPP4R3BQ5MIZ7 849 aa17.39■□□□□ 0.37
DDX56-205ENST00000433257 MARCH10Q8NA82 808 aaPredicted RBP17.39■□□□□ 0.37
DDX56-205ENST00000433257 CGNQ9P2M7 1197 aaKnown RBP17.39■□□□□ 0.37
DDX56-205ENST00000433257 RIOK3O14730 519 aaKnown RBP17.39■□□□□ 0.37
DDX56-205ENST00000433257 HMGB1P09429 215 aaKnown RBP17.39■□□□□ 0.37
DDX56-205ENST00000433257 DRC7Q8IY82 874 aa17.39■□□□□ 0.37
DDX56-205ENST00000433257 PYCARDQ9ULZ3 195 aa17.39■□□□□ 0.37
DDX56-205ENST00000433257 BRWD3Q6RI45 1802 aa17.38■□□□□ 0.37
DDX56-205ENST00000433257 PCDH11XQ9BZA7 1347 aa17.38■□□□□ 0.37
DDX56-205ENST00000433257 PCDH11YQ9BZA8 1340 aa17.38■□□□□ 0.37
DDX56-205ENST00000433257 TNS2Q63HR2 1409 aa17.38■□□□□ 0.37
DDX56-205ENST00000433257 USPL1Q5W0Q7 1092 aa17.38■□□□□ 0.37
DDX56-205ENST00000433257 LEO1Q8WVC0 666 aaPredicted RBP17.38■□□□□ 0.37
DDX56-205ENST00000433257 TRIM5Q9C035 493 aa17.38■□□□□ 0.37
DDX56-205ENST00000433257 CBX8Q9HC52 389 aa17.38■□□□□ 0.37
DDX56-205ENST00000433257 U3KPZ7 1027 aaPredicted RBP17.38■□□□□ 0.37
DDX56-205ENST00000433257 HEG1Q9ULI3 1381 aa17.38■□□□□ 0.37
DDX56-205ENST00000433257 WNK3Q9BYP7 1800 aa17.37■□□□□ 0.37
DDX56-205ENST00000433257 GOLGA6L19H0YKK7 550 aa17.37■□□□□ 0.37
DDX56-205ENST00000433257 TUBB4AP04350 444 aa17.37■□□□□ 0.37
DDX56-205ENST00000433257 ST3GAL1Q11201 340 aa17.37■□□□□ 0.37
DDX56-205ENST00000433257 NMIQ13287 307 aaPredicted RBP17.37■□□□□ 0.37
DDX56-205ENST00000433257 ANO6Q4KMQ2 910 aa17.37■□□□□ 0.37
DDX56-205ENST00000433257 TAF3Q5VWG9 929 aa17.37■□□□□ 0.37
DDX56-205ENST00000433257 MRFAP1L1Q96HT8 127 aa17.37■□□□□ 0.37
DDX56-205ENST00000433257 FSD1Q9BTV5 496 aa17.37■□□□□ 0.37
DDX56-205ENST00000433257 DACT1Q9NYF0 836 aa17.37■□□□□ 0.37
DDX56-205ENST00000433257 OGFRQ9NZT2 677 aa17.37■□□□□ 0.37
DDX56-205ENST00000433257 PLEKHG2Q9H7P9 1386 aa17.36■□□□□ 0.37
DDX56-205ENST00000433257 GRM8O00222 908 aa17.36■□□□□ 0.37
DDX56-205ENST00000433257 FAM193AP78312 1265 aa17.36■□□□□ 0.37
DDX56-205ENST00000433257 C1orf141Q5JVX7 400 aa17.36■□□□□ 0.37
DDX56-205ENST00000433257 CDC37L1Q7L3B6 337 aa17.36■□□□□ 0.37
DDX56-205ENST00000433257 MAP3K2Q9Y2U5 619 aa17.36■□□□□ 0.37
DDX56-205ENST00000433257 ZNF165P49910 485 aa17.36■□□□□ 0.37
DDX56-205ENST00000433257 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
DDX56-205ENST00000433257 SPC24Q8NBT2 197 aa17.36■□□□□ 0.37
DDX56-205ENST00000433257 BICD2Q8TD16 824 aa17.36■□□□□ 0.37
DDX56-205ENST00000433257 COL15A1P39059 1388 aa17.35■□□□□ 0.37
DDX56-205ENST00000433257 AP5Z1O43299 807 aa17.35■□□□□ 0.37
DDX56-205ENST00000433257 ZSCAN20P17040 1043 aaPredicted RBP17.35■□□□□ 0.37
DDX56-205ENST00000433257 LIG1P18858 919 aa17.35■□□□□ 0.37
DDX56-205ENST00000433257 PTGS1P23219 599 aa17.35■□□□□ 0.37
DDX56-205ENST00000433257 STX1AQ16623 288 aa17.35■□□□□ 0.37
DDX56-205ENST00000433257 NAA16Q6N069 864 aaPredicted RBP17.35■□□□□ 0.37
DDX56-205ENST00000433257 CCDC186Q7Z3E2 898 aa17.35■□□□□ 0.37
DDX56-205ENST00000433257 CCDC112Q8NEF3 446 aa17.35■□□□□ 0.37
DDX56-205ENST00000433257 GTF3C6Q969F1 213 aa17.35■□□□□ 0.37
DDX56-205ENST00000433257 KCND1Q9NSA2 647 aa17.35■□□□□ 0.37
DDX56-205ENST00000433257 CPA1P15085 419 aa17.34■□□□□ 0.37
DDX56-205ENST00000433257 GABPB1Q06547 395 aaPredicted RBP17.34■□□□□ 0.37
DDX56-205ENST00000433257 NEXNQ0ZGT2 675 aa17.34■□□□□ 0.37
DDX56-205ENST00000433257 SF3B2Q13435 895 aaKnown RBP17.34■□□□□ 0.37
DDX56-205ENST00000433257 ZSCAN25Q6NSZ9 544 aa17.34■□□□□ 0.37
DDX56-205ENST00000433257 CCDC125Q86Z20 511 aa17.34■□□□□ 0.37
DDX56-205ENST00000433257 ZNF396Q96N95 335 aaPredicted RBP17.34■□□□□ 0.37
DDX56-205ENST00000433257 NAT10Q9H0A0 1025 aaKnown RBP17.34■□□□□ 0.37
DDX56-205ENST00000433257 CLIP2Q9UDT6 1046 aa17.34■□□□□ 0.37
DDX56-205ENST00000433257 MYH15Q9Y2K3 1946 aa17.34■□□□□ 0.37
DDX56-205ENST00000433257 ADAMTS7Q9UKP4 1686 aa17.34■□□□□ 0.37
DDX56-205ENST00000433257 SIPA1L3O60292 1781 aaPredicted RBP17.33■□□□□ 0.37
DDX56-205ENST00000433257 H3BQV1 296 aa17.33■□□□□ 0.37
DDX56-205ENST00000433257 CYP27B1O15528 508 aa17.33■□□□□ 0.37
DDX56-205ENST00000433257 IFFO2Q5TF58 517 aa17.33■□□□□ 0.37
DDX56-205ENST00000433257 ZNF530Q6P9A1 599 aaPredicted RBP17.33■□□□□ 0.37
DDX56-205ENST00000433257 LUZP1Q86V48 1076 aa17.33■□□□□ 0.37
DDX56-205ENST00000433257 NECAB1Q8N987 351 aa17.33■□□□□ 0.37
DDX56-205ENST00000433257 RNMTO43148 476 aaKnown RBP17.32■□□□□ 0.36
DDX56-205ENST00000433257 TNNT1P13805 278 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 GSDMDP57764 484 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 TOB2Q14106 344 aaPredicted RBP17.32■□□□□ 0.36
DDX56-205ENST00000433257 CREBRFQ8IUR6 639 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 RGS22Q8NE09 1264 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 DDX21Q9NR30 783 aaKnown RBP eCLIP17.32■□□□□ 0.36
DDX56-205ENST00000433257 SOCS7O14512 581 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 NRDCO43847 1150 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 TRIM37O94972 964 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 PHKG2P15735 406 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 ATP5JP18859 108 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 RESTQ13127 1097 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 C17orf53Q8N3J3 647 aaPredicted RBP17.32■□□□□ 0.36
DDX56-205ENST00000433257 NEK1Q96PY6 1258 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 LARP6Q9BRS8 491 aaKnown RBP17.32■□□□□ 0.36
DDX56-205ENST00000433257 ANO10Q9NW15 660 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 EP400Q96L91 3159 aa17.32■□□□□ 0.36
DDX56-205ENST00000433257 CCDC73Q6ZRK6 1079 aa17.31■□□□□ 0.36
DDX56-205ENST00000433257 UPF1Q92900 1129 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDX56-205ENST00000433257 ACSBG1Q96GR2 724 aa17.31■□□□□ 0.36
DDX56-205ENST00000433257 SASH1O94885 1247 aa17.3■□□□□ 0.36
DDX56-205ENST00000433257 TPD52L1Q16890 204 aaPredicted RBP17.3■□□□□ 0.36
DDX56-205ENST00000433257 MPNDQ8N594 471 aa17.3■□□□□ 0.36
DDX56-205ENST00000433257 EAF2Q96CJ1 260 aaPredicted RBP17.3■□□□□ 0.36
DDX56-205ENST00000433257 FAM227BQ96M60 508 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms