RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 MTMR6Q9Y217 621 aa17.52■□□□□ 0.4
RFTN1-203ENST00000432519 FKBP4Q02790 459 aaKnown RBP eCLIP17.52■□□□□ 0.39
RFTN1-203ENST00000432519 TTLL11Q8NHH1 800 aa17.52■□□□□ 0.39
RFTN1-203ENST00000432519 XAGE2Q96GT9 111 aa17.52■□□□□ 0.39
RFTN1-203ENST00000432519 RBSNQ9H1K0 784 aa17.52■□□□□ 0.39
RFTN1-203ENST00000432519 PSMA5P28066 241 aa17.51■□□□□ 0.39
RFTN1-203ENST00000432519 TSGA10IPQ3SY00 556 aa17.51■□□□□ 0.39
RFTN1-203ENST00000432519 UBN2Q6ZU65 1347 aa17.51■□□□□ 0.39
RFTN1-203ENST00000432519 PALLDQ8WX93 1383 aa17.51■□□□□ 0.39
RFTN1-203ENST00000432519 LRP6O75581 1613 aa17.51■□□□□ 0.39
RFTN1-203ENST00000432519 F13A1P00488 732 aa17.51■□□□□ 0.39
RFTN1-203ENST00000432519 HSP90AB3PQ58FF7 597 aa17.51■□□□□ 0.39
RFTN1-203ENST00000432519 SH2B1Q9NRF2 756 aaPredicted RBP17.51■□□□□ 0.39
RFTN1-203ENST00000432519 SLIT2O94813 1529 aa17.5■□□□□ 0.39
RFTN1-203ENST00000432519 IFIT5Q13325 482 aaKnown RBP17.5■□□□□ 0.39
RFTN1-203ENST00000432519 ZSCAN31Q96LW9 406 aaPredicted RBP17.5■□□□□ 0.39
RFTN1-203ENST00000432519 PLA2G12BQ9BX93 195 aa17.5■□□□□ 0.39
RFTN1-203ENST00000432519 MAST3O60307 1309 aa17.5■□□□□ 0.39
RFTN1-203ENST00000432519 SH3TC1Q8TE82 1336 aa17.5■□□□□ 0.39
RFTN1-203ENST00000432519 NUTM2BA6NNL0 878 aaPredicted RBP17.5■□□□□ 0.39
RFTN1-203ENST00000432519 NUTM2EB1AL46 878 aaPredicted RBP17.5■□□□□ 0.39
RFTN1-203ENST00000432519 ITGA6P23229 1130 aa17.5■□□□□ 0.39
RFTN1-203ENST00000432519 NUTM2AQ8IVF1 878 aaPredicted RBP17.5■□□□□ 0.39
RFTN1-203ENST00000432519 DOT1LQ8TEK3 1739 aa17.5■□□□□ 0.39
RFTN1-203ENST00000432519 RIC1Q4ADV7 1423 aa17.49■□□□□ 0.39
RFTN1-203ENST00000432519 RFX7Q2KHR2 1363 aa17.49■□□□□ 0.39
RFTN1-203ENST00000432519 M0R2C6 588 aa17.49■□□□□ 0.39
RFTN1-203ENST00000432519 ZMYM1Q5SVZ6 1142 aa17.49■□□□□ 0.39
RFTN1-203ENST00000432519 FAM173BQ6P4H8 233 aa17.49■□□□□ 0.39
RFTN1-203ENST00000432519 OSBP2Q969R2 916 aa17.49■□□□□ 0.39
RFTN1-203ENST00000432519 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
RFTN1-203ENST00000432519 AHDC1Q5TGY3 1603 aaPredicted RBP17.49■□□□□ 0.39
RFTN1-203ENST00000432519 VPS37CA5D8V6 355 aaPredicted RBP17.49■□□□□ 0.39
RFTN1-203ENST00000432519 NASPP49321 788 aaPredicted RBP17.49■□□□□ 0.39
RFTN1-203ENST00000432519 TAF7LQ5H9L4 462 aa17.49■□□□□ 0.39
RFTN1-203ENST00000432519 TTLL5Q6EMB2 1281 aa17.49■□□□□ 0.39
RFTN1-203ENST00000432519 DZIP3Q86Y13 1208 aaKnown RBP17.49■□□□□ 0.39
RFTN1-203ENST00000432519 MARCH10Q8NA82 808 aaPredicted RBP17.49■□□□□ 0.39
RFTN1-203ENST00000432519 NEK1Q96PY6 1258 aa17.49■□□□□ 0.39
RFTN1-203ENST00000432519 TRMT112Q9UI30 125 aaKnown RBP17.49■□□□□ 0.39
RFTN1-203ENST00000432519 NUP98P52948 1817 aa17.49■□□□□ 0.39
RFTN1-203ENST00000432519 COL22A1Q8NFW1 1626 aaPredicted RBP17.48■□□□□ 0.39
RFTN1-203ENST00000432519 FAM177BA6PVY3 158 aa17.48■□□□□ 0.39
RFTN1-203ENST00000432519 DNM1Q05193 864 aaKnown RBP17.48■□□□□ 0.39
RFTN1-203ENST00000432519 RIPOR2Q9Y4F9 1068 aa17.48■□□□□ 0.39
RFTN1-203ENST00000432519 SPATA31A1Q5TZJ5 1347 aa17.48■□□□□ 0.39
RFTN1-203ENST00000432519 IRS4O14654 1257 aaPredicted RBP17.48■□□□□ 0.39
RFTN1-203ENST00000432519 FIBPO43427 364 aa17.48■□□□□ 0.39
RFTN1-203ENST00000432519 FERMT3Q86UX7 667 aa17.48■□□□□ 0.39
RFTN1-203ENST00000432519 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
RFTN1-203ENST00000432519 FOXP2O15409 715 aa17.47■□□□□ 0.39
RFTN1-203ENST00000432519 HSPD1P10809 573 aaKnown RBP17.47■□□□□ 0.39
RFTN1-203ENST00000432519 ZAP70P43403 619 aa17.47■□□□□ 0.39
RFTN1-203ENST00000432519 LDHAL6AQ6ZMR3 332 aa17.47■□□□□ 0.39
RFTN1-203ENST00000432519 Q6ZUG5 572 aa17.47■□□□□ 0.39
RFTN1-203ENST00000432519 CDC37L1Q7L3B6 337 aa17.47■□□□□ 0.39
RFTN1-203ENST00000432519 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
RFTN1-203ENST00000432519 SNAP23O00161 211 aa17.47■□□□□ 0.39
RFTN1-203ENST00000432519 JAK2O60674 1132 aa17.47■□□□□ 0.39
RFTN1-203ENST00000432519 CTSWP56202 376 aa17.47■□□□□ 0.39
RFTN1-203ENST00000432519 GORABQ5T7V8 394 aa17.47■□□□□ 0.39
RFTN1-203ENST00000432519 RNF113AO15541 343 aaKnown RBP17.46■□□□□ 0.39
RFTN1-203ENST00000432519 DDB1Q16531 1140 aa17.46■□□□□ 0.39
RFTN1-203ENST00000432519 INTS5Q6P9B9 1019 aaKnown RBP17.46■□□□□ 0.39
RFTN1-203ENST00000432519 FAM43AQ8N2R8 423 aa17.46■□□□□ 0.39
RFTN1-203ENST00000432519 TTC39AQ5SRH9 613 aa17.46■□□□□ 0.39
RFTN1-203ENST00000432519 CHST3Q7LGC8 479 aa17.46■□□□□ 0.39
RFTN1-203ENST00000432519 HELLSQ9NRZ9 838 aa17.46■□□□□ 0.39
RFTN1-203ENST00000432519 WNK3Q9BYP7 1800 aa17.46■□□□□ 0.39
RFTN1-203ENST00000432519 CDHR2Q9BYE9 1310 aa17.46■□□□□ 0.39
RFTN1-203ENST00000432519 LAMA4Q16363 1823 aa17.46■□□□□ 0.38
RFTN1-203ENST00000432519 MBD3O95983 291 aa17.45■□□□□ 0.38
RFTN1-203ENST00000432519 ITPK1Q13572 414 aa17.45■□□□□ 0.38
RFTN1-203ENST00000432519 METTL24Q5JXM2 366 aa17.45■□□□□ 0.38
RFTN1-203ENST00000432519 LARP1BQ659C4 914 aaKnown RBP17.45■□□□□ 0.38
RFTN1-203ENST00000432519 HELBQ8NG08 1087 aaPredicted RBP17.45■□□□□ 0.38
RFTN1-203ENST00000432519 KCNQ2O43526 872 aa17.45■□□□□ 0.38
RFTN1-203ENST00000432519 PPFIA3O75145 1194 aa17.45■□□□□ 0.38
RFTN1-203ENST00000432519 HCLS1P14317 486 aaPredicted RBP17.45■□□□□ 0.38
RFTN1-203ENST00000432519 BRF1Q92994 677 aa17.45■□□□□ 0.38
RFTN1-203ENST00000432519 ALDH8A1Q9H2A2 487 aaPredicted RBP17.45■□□□□ 0.38
RFTN1-203ENST00000432519 IL6STP40189 918 aaPredicted RBP17.44■□□□□ 0.38
RFTN1-203ENST00000432519 MCAMP43121 646 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 ATP2B3Q16720 1220 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 CCDC158Q5M9N0 1113 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 LRSAM1Q6UWE0 723 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 EIF5P55010 431 aaKnown RBP17.44■□□□□ 0.38
RFTN1-203ENST00000432519 PIP4K2BP78356 416 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 ZNF34Q8IZ26 560 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 VGLL2Q8N8G2 317 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 TMEM87AQ8NBN3 555 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 PUS7LQ9H0K6 701 aaKnown RBP17.44■□□□□ 0.38
RFTN1-203ENST00000432519 ANKRD36CQ5JPF3 1778 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 ATP6V1AP38606 617 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 SUSD4Q5VX71 490 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 RNF214Q8ND24 703 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 CNNM1Q9NRU3 951 aa17.44■□□□□ 0.38
RFTN1-203ENST00000432519 LTBP4Q8N2S1 1624 aa17.43■□□□□ 0.38
RFTN1-203ENST00000432519 MYH14Q7Z406 1995 aaKnown RBP17.43■□□□□ 0.38
RFTN1-203ENST00000432519 CRKLP46109 303 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms