RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 FAM43BQ6ZT52 329 aaPredicted RBP9.65□□□□□ -0.87
VTI1A-202ENST00000432306 STRN4Q9NRL3 753 aa9.65□□□□□ -0.87
VTI1A-202ENST00000432306 MBIPQ9NS73 344 aa9.65□□□□□ -0.87
VTI1A-202ENST00000432306 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.65□□□□□ -0.87
VTI1A-202ENST00000432306 SALL3Q9BXA9 1300 aa9.64□□□□□ -0.87
VTI1A-202ENST00000432306 PRKAR2BP31323 418 aa9.64□□□□□ -0.87
VTI1A-202ENST00000432306 TWISTNBQ3B726 338 aaPredicted RBP9.64□□□□□ -0.87
VTI1A-202ENST00000432306 CEP85Q6P2H3 762 aa9.64□□□□□ -0.87
VTI1A-202ENST00000432306 TSPYL6Q8N831 410 aa9.64□□□□□ -0.87
VTI1A-202ENST00000432306 ZNF784Q8NCA9 323 aaPredicted RBP9.64□□□□□ -0.87
VTI1A-202ENST00000432306 TMX3Q96JJ7 454 aa9.64□□□□□ -0.87
VTI1A-202ENST00000432306 KLHL42Q9P2K6 505 aa9.64□□□□□ -0.87
VTI1A-202ENST00000432306 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.64□□□□□ -0.87
VTI1A-202ENST00000432306 NSFL1CQ9UNZ2 370 aaKnown RBP9.64□□□□□ -0.87
VTI1A-202ENST00000432306 PTPRCP08575 1304 aa9.64□□□□□ -0.87
VTI1A-202ENST00000432306 CASZ1Q86V15 1759 aa9.64□□□□□ -0.87
VTI1A-202ENST00000432306 SBF2Q86WG5 1849 aa9.64□□□□□ -0.87
VTI1A-202ENST00000432306 PARP4Q9UKK3 1724 aaKnown RBP9.63□□□□□ -0.87
VTI1A-202ENST00000432306 TPM3P06753 285 aa9.63□□□□□ -0.87
VTI1A-202ENST00000432306 POTEJP0CG39 1038 aa9.63□□□□□ -0.87
VTI1A-202ENST00000432306 OS9Q13438 667 aaPredicted RBP9.63□□□□□ -0.87
VTI1A-202ENST00000432306 ZNF710Q8N1W2 664 aa9.63□□□□□ -0.87
VTI1A-202ENST00000432306 NGDNQ8NEJ9 315 aaKnown RBP9.63□□□□□ -0.87
VTI1A-202ENST00000432306 GIPC2Q8TF65 315 aa9.63□□□□□ -0.87
VTI1A-202ENST00000432306 POLKQ9UBT6 870 aa9.63□□□□□ -0.87
VTI1A-202ENST00000432306 NRKQ7Z2Y5 1582 aa9.63□□□□□ -0.87
VTI1A-202ENST00000432306 EVA1CP58658 441 aa9.62□□□□□ -0.87
VTI1A-202ENST00000432306 IGBP1P78318 339 aa9.62□□□□□ -0.87
VTI1A-202ENST00000432306 NOLC1Q14978 699 aaKnown RBP eCLIP9.62□□□□□ -0.87
VTI1A-202ENST00000432306 SYCP1Q15431 976 aa9.62□□□□□ -0.87
VTI1A-202ENST00000432306 IFFO2Q5TF58 517 aa9.62□□□□□ -0.87
VTI1A-202ENST00000432306 HDGFL2Q7Z4V5 671 aaPredicted RBP9.62□□□□□ -0.87
VTI1A-202ENST00000432306 BANK1Q8NDB2 785 aa9.62□□□□□ -0.87
VTI1A-202ENST00000432306 GPATCH3Q96I76 525 aa9.62□□□□□ -0.87
VTI1A-202ENST00000432306 IL13P35225 146 aa9.62□□□□□ -0.87
VTI1A-202ENST00000432306 LARGE2Q8N3Y3 721 aa9.62□□□□□ -0.87
VTI1A-202ENST00000432306 RPAP1Q9BWH6 1393 aaPredicted RBP9.62□□□□□ -0.87
VTI1A-202ENST00000432306 CCDC194A0A1B0GVG4 234 aa9.61□□□□□ -0.87
VTI1A-202ENST00000432306 CTIFO43310 598 aaKnown RBP9.61□□□□□ -0.87
VTI1A-202ENST00000432306 CREB3O43889 395 aa9.61□□□□□ -0.87
VTI1A-202ENST00000432306 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
VTI1A-202ENST00000432306 ANKRD7Q92527 254 aa9.61□□□□□ -0.87
VTI1A-202ENST00000432306 USP25Q9UHP3 1055 aa9.61□□□□□ -0.87
VTI1A-202ENST00000432306 THRAP3Q9Y2W1 955 aaKnown RBP9.61□□□□□ -0.87
VTI1A-202ENST00000432306 KIF3AQ9Y496 699 aa9.61□□□□□ -0.87
VTI1A-202ENST00000432306 AOX1Q06278 1338 aa9.6□□□□□ -0.87
VTI1A-202ENST00000432306 WDR33Q9C0J8 1336 aaKnown RBP9.6□□□□□ -0.87
VTI1A-202ENST00000432306 hCG_2014768A0A024R1R8 64 aa9.6□□□□□ -0.87
VTI1A-202ENST00000432306 PPFIA4O75335 1185 aa9.6□□□□□ -0.87
VTI1A-202ENST00000432306 RFX1P22670 979 aa9.6□□□□□ -0.87
VTI1A-202ENST00000432306 C1QTNF8P60827 252 aa9.6□□□□□ -0.87
VTI1A-202ENST00000432306 CCDC183Q5T5S1 534 aa9.6□□□□□ -0.87
VTI1A-202ENST00000432306 C8orf58Q8NAV2 365 aa9.6□□□□□ -0.87
VTI1A-202ENST00000432306 PHACTR3Q96KR7 559 aa9.6□□□□□ -0.87
VTI1A-202ENST00000432306 FUCA2Q9BTY2 467 aa9.6□□□□□ -0.87
VTI1A-202ENST00000432306 TUBGCP6Q96RT7 1819 aa9.6□□□□□ -0.87
VTI1A-202ENST00000432306 EDC4Q6P2E9 1401 aaKnown RBP9.6□□□□□ -0.87
VTI1A-202ENST00000432306 PRR36Q9H6K5 1346 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 TLDC2A0PJX2 215 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 TMEM88BA6NKF7 163 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 POTEB2H3BUK9 544 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 PLSCR1O15162 318 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 HMMRO75330 724 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 PARNO95453 639 aaKnown RBP9.59□□□□□ -0.87
VTI1A-202ENST00000432306 PDE1AP54750 535 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 GIGYF2Q6Y7W6 1299 aaKnown RBP9.59□□□□□ -0.87
VTI1A-202ENST00000432306 FEZ1Q99689 392 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 DIAPH3Q9NSV4 1193 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 OVOS2A0A0G2JMS6 1433 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 OVOS2A0A0J9YW53 1432 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 OVOS2Q6IE36 1432 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 WASLO00401 505 aaPredicted RBP9.59□□□□□ -0.87
VTI1A-202ENST00000432306 MX1P20591 662 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 HSP90AB2PQ58FF8 381 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 C16orf71Q8IYS4 520 aaPredicted RBP9.59□□□□□ -0.87
VTI1A-202ENST00000432306 KIAA1524Q8TCG1 905 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 ESYT1Q9BSJ8 1104 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 SNRKQ9NRH2 765 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 STAP2Q9UGK3 403 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 PCDHGA4Q9Y5G9 962 aa9.59□□□□□ -0.87
VTI1A-202ENST00000432306 PEAK1Q9H792 1746 aa9.58□□□□□ -0.88
VTI1A-202ENST00000432306 LMO7Q8WWI1 1683 aa9.58□□□□□ -0.88
VTI1A-202ENST00000432306 POM121CA8CG34 1229 aa9.58□□□□□ -0.88
VTI1A-202ENST00000432306 NEK4P51957 841 aa9.58□□□□□ -0.88
VTI1A-202ENST00000432306 PTPROQ16827 1216 aa9.58□□□□□ -0.88
VTI1A-202ENST00000432306 TAF3Q5VWG9 929 aa9.58□□□□□ -0.88
VTI1A-202ENST00000432306 OTUD7AQ8TE49 926 aaPredicted RBP9.58□□□□□ -0.88
VTI1A-202ENST00000432306 KCNB2Q92953 911 aa9.58□□□□□ -0.88
VTI1A-202ENST00000432306 AKAP12Q02952 1782 aa9.57□□□□□ -0.88
VTI1A-202ENST00000432306 CHL1O00533 1208 aa9.57□□□□□ -0.88
VTI1A-202ENST00000432306 FECHP22830 423 aa9.57□□□□□ -0.88
VTI1A-202ENST00000432306 ARID4AP29374 1257 aaPredicted RBP9.57□□□□□ -0.88
VTI1A-202ENST00000432306 UBE2HP62256 183 aa9.57□□□□□ -0.88
VTI1A-202ENST00000432306 EGFLAMQ63HQ2 1017 aa9.57□□□□□ -0.88
VTI1A-202ENST00000432306 LARP1Q6PKG0 1096 aaKnown RBP9.57□□□□□ -0.88
VTI1A-202ENST00000432306 SRCIN1Q9C0H9 1055 aa9.57□□□□□ -0.88
VTI1A-202ENST00000432306 CUEDC1Q9NWM3 386 aaPredicted RBP9.57□□□□□ -0.88
VTI1A-202ENST00000432306 ADCY5O95622 1261 aa9.56□□□□□ -0.88
VTI1A-202ENST00000432306 NOM1Q5C9Z4 860 aaKnown RBP9.56□□□□□ -0.88
VTI1A-202ENST00000432306 USP48Q86UV5 1035 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms