RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 GMPSP49915 693 aaPredicted RBP22.33■■□□□ 1.17
NUP50-208ENST00000430547 PLA2G12BQ9BX93 195 aa22.33■■□□□ 1.17
NUP50-208ENST00000430547 GPRC5DQ9NZD1 345 aa22.33■■□□□ 1.17
NUP50-208ENST00000430547 ECE2O60344 883 aa22.32■■□□□ 1.16
NUP50-208ENST00000430547 IGHMBP2P38935 993 aaKnown RBP22.32■■□□□ 1.16
NUP50-208ENST00000430547 BEND3Q5T5X7 828 aa22.32■■□□□ 1.16
NUP50-208ENST00000430547 SLC4A10Q6U841 1118 aa22.32■■□□□ 1.16
NUP50-208ENST00000430547 USP50Q70EL3 339 aaPredicted RBP22.32■■□□□ 1.16
NUP50-208ENST00000430547 GPR101Q96P66 508 aaPredicted RBP22.32■■□□□ 1.16
NUP50-208ENST00000430547 ADARB2Q9NS39 739 aaKnown RBP22.32■■□□□ 1.16
NUP50-208ENST00000430547 YDJCA8MPS7 323 aa22.31■■□□□ 1.16
NUP50-208ENST00000430547 SLFN5Q08AF3 891 aa22.31■■□□□ 1.16
NUP50-208ENST00000430547 MAP1SQ66K74 1059 aaPredicted RBP22.31■■□□□ 1.16
NUP50-208ENST00000430547 BSDC1Q9NW68 430 aaPredicted RBP22.31■■□□□ 1.16
NUP50-208ENST00000430547 CASP7P55210 303 aa22.3■■□□□ 1.16
NUP50-208ENST00000430547 DOK7Q18PE1 504 aa22.3■■□□□ 1.16
NUP50-208ENST00000430547 CNTROBQ8N137 903 aa22.3■■□□□ 1.16
NUP50-208ENST00000430547 CREBZFQ9NS37 354 aa22.3■■□□□ 1.16
NUP50-208ENST00000430547 PASKQ96RG2 1323 aa22.3■■□□□ 1.16
NUP50-208ENST00000430547 ITGA6P23229 1130 aa22.29■■□□□ 1.16
NUP50-208ENST00000430547 ATP2B4P23634 1241 aa22.29■■□□□ 1.16
NUP50-208ENST00000430547 FAM161AQ3B820 660 aa22.29■■□□□ 1.16
NUP50-208ENST00000430547 MPHOSPH8Q99549 860 aa22.29■■□□□ 1.16
NUP50-208ENST00000430547 C9orf78Q9NZ63 289 aaPredicted RBP22.29■■□□□ 1.16
NUP50-208ENST00000430547 PSME4Q14997 1843 aa22.29■■□□□ 1.16
NUP50-208ENST00000430547 SCN9AQ15858 1988 aa22.29■■□□□ 1.16
NUP50-208ENST00000430547 ITGBL1O95965 494 aaPredicted RBP22.28■■□□□ 1.16
NUP50-208ENST00000430547 SRCIN1Q9C0H9 1055 aa22.28■■□□□ 1.16
NUP50-208ENST00000430547 CHMP3Q9Y3E7 222 aa22.28■■□□□ 1.16
NUP50-208ENST00000430547 GRM8O00222 908 aa22.27■■□□□ 1.16
NUP50-208ENST00000430547 PSMD14O00487 310 aa22.27■■□□□ 1.16
NUP50-208ENST00000430547 ALDH1L1O75891 902 aa22.27■■□□□ 1.16
NUP50-208ENST00000430547 CSF1RP07333 972 aa22.27■■□□□ 1.16
NUP50-208ENST00000430547 TRPM7Q96QT4 1865 aa22.27■■□□□ 1.16
NUP50-208ENST00000430547 MINPP1Q9UNW1 487 aa22.27■■□□□ 1.16
NUP50-208ENST00000430547 ANKRD18BA2A2Z9 1011 aa22.26■■□□□ 1.15
NUP50-208ENST00000430547 H7C1D1 291 aa22.26■■□□□ 1.15
NUP50-208ENST00000430547 MRPL50Q8N5N7 158 aaKnown RBP22.26■■□□□ 1.15
NUP50-208ENST00000430547 CDCA7LQ96GN5 454 aa22.26■■□□□ 1.15
NUP50-208ENST00000430547 CNOT7Q9UIV1 285 aaKnown RBP22.26■■□□□ 1.15
NUP50-208ENST00000430547 PTPRCP08575 1304 aa22.26■■□□□ 1.15
NUP50-208ENST00000430547 TMEM88BA6NKF7 163 aa22.25■■□□□ 1.15
NUP50-208ENST00000430547 IFIT5Q13325 482 aaKnown RBP22.25■■□□□ 1.15
NUP50-208ENST00000430547 MICALL2Q8IY33 904 aa22.25■■□□□ 1.15
NUP50-208ENST00000430547 ZBTB12Q9Y330 459 aaPredicted RBP22.25■■□□□ 1.15
NUP50-208ENST00000430547 RPS12P25398 132 aaKnown RBP22.24■■□□□ 1.15
NUP50-208ENST00000430547 CCT4P50991 539 aaKnown RBP22.24■■□□□ 1.15
NUP50-208ENST00000430547 SSH1Q8WYL5 1049 aa22.24■■□□□ 1.15
NUP50-208ENST00000430547 DPF2Q92785 391 aa22.24■■□□□ 1.15
NUP50-208ENST00000430547 ANKRD2Q9GZV1 360 aa22.24■■□□□ 1.15
NUP50-208ENST00000430547 MED23Q9ULK4 1368 aa22.24■■□□□ 1.15
NUP50-208ENST00000430547 A0A1B0GUL6 1792 aa22.23■■□□□ 1.15
NUP50-208ENST00000430547 FOXO4P98177 505 aa22.23■■□□□ 1.15
NUP50-208ENST00000430547 DIEXFQ68CQ4 756 aaKnown RBP22.23■■□□□ 1.15
NUP50-208ENST00000430547 JMYQ8N9B5 988 aa22.23■■□□□ 1.15
NUP50-208ENST00000430547 KCNJ4P48050 445 aa22.22■■□□□ 1.15
NUP50-208ENST00000430547 ALDH1L2Q3SY69 923 aa22.22■■□□□ 1.15
NUP50-208ENST00000430547 TAF7LQ5H9L4 462 aa22.22■■□□□ 1.15
NUP50-208ENST00000430547 LMBR1LQ6UX01 489 aa22.22■■□□□ 1.15
NUP50-208ENST00000430547 KCNQ5Q9NR82 932 aa22.22■■□□□ 1.15
NUP50-208ENST00000430547 SMC4Q9NTJ3 1288 aa22.22■■□□□ 1.15
NUP50-208ENST00000430547 MKRN1Q9UHC7 482 aaKnown RBP22.22■■□□□ 1.15
NUP50-208ENST00000430547 LEMD3Q9Y2U8 911 aa22.22■■□□□ 1.15
NUP50-208ENST00000430547 CCDC57Q2TAC2 916 aa22.21■■□□□ 1.15
NUP50-208ENST00000430547 CT47B1P0C2W7 299 aaPredicted RBP22.2■■□□□ 1.14
NUP50-208ENST00000430547 PODNQ7Z5L7 613 aa22.2■■□□□ 1.14
NUP50-208ENST00000430547 TRPM4Q8TD43 1214 aa22.2■■□□□ 1.14
NUP50-208ENST00000430547 ZC3H15Q8WU90 426 aaKnown RBP22.2■■□□□ 1.14
NUP50-208ENST00000430547 SHTN1A0MZ66 631 aa22.19■■□□□ 1.14
NUP50-208ENST00000430547 VIL1P09327 827 aaKnown RBP22.19■■□□□ 1.14
NUP50-208ENST00000430547 CHRNDQ07001 517 aa22.19■■□□□ 1.14
NUP50-208ENST00000430547 TRMT2AQ8IZ69 625 aaKnown RBP22.19■■□□□ 1.14
NUP50-208ENST00000430547 ZNF804BA4D1E1 1349 aa22.19■■□□□ 1.14
NUP50-208ENST00000430547 CNTNAP1P78357 1384 aa22.18■■□□□ 1.14
NUP50-208ENST00000430547 EPHA10Q5JZY3 1008 aa22.18■■□□□ 1.14
NUP50-208ENST00000430547 SAMD7Q7Z3H4 446 aa22.18■■□□□ 1.14
NUP50-208ENST00000430547 ABT1Q9ULW3 272 aaKnown RBP22.18■■□□□ 1.14
NUP50-208ENST00000430547 POLR2AP24928 1970 aaKnown RBP22.18■■□□□ 1.14
NUP50-208ENST00000430547 USP17L3A6NCW0 530 aa22.17■■□□□ 1.14
NUP50-208ENST00000430547 USP17L4A6NCW7 530 aa22.17■■□□□ 1.14
NUP50-208ENST00000430547 WTIPA6NIX2 430 aaPredicted RBP22.17■■□□□ 1.14
NUP50-208ENST00000430547 HIRAP54198 1017 aaPredicted RBP22.17■■□□□ 1.14
NUP50-208ENST00000430547 TBC1D10BQ4KMP7 808 aaPredicted RBP22.17■■□□□ 1.14
NUP50-208ENST00000430547 RSBN1LQ6PCB5 846 aaPredicted RBP22.17■■□□□ 1.14
NUP50-208ENST00000430547 USP17L1Q7RTZ2 530 aa22.17■■□□□ 1.14
NUP50-208ENST00000430547 AGBL3Q8NEM8 1001 aa22.17■■□□□ 1.14
NUP50-208ENST00000430547 FBXW7Q969H0 707 aa22.17■■□□□ 1.14
NUP50-208ENST00000430547 COA1Q9GZY4 146 aa22.17■■□□□ 1.14
NUP50-208ENST00000430547 TRAF5O00463 557 aa22.16■■□□□ 1.14
NUP50-208ENST00000430547 NBPF7P0C2Y1 421 aaPredicted RBP22.16■■□□□ 1.14
NUP50-208ENST00000430547 RBM26Q5T8P6 1007 aaKnown RBP22.16■■□□□ 1.14
NUP50-208ENST00000430547 MIER1Q8N108 512 aa22.16■■□□□ 1.14
NUP50-208ENST00000430547 SUCLG2Q96I99 432 aa22.16■■□□□ 1.14
NUP50-208ENST00000430547 CNNM1Q9NRU3 951 aa22.16■■□□□ 1.14
NUP50-208ENST00000430547 PGAP2Q9UHJ9 254 aa22.16■■□□□ 1.14
NUP50-208ENST00000430547 ZNF609O15014 1411 aa22.15■■□□□ 1.14
NUP50-208ENST00000430547 UTYO14607 1347 aa22.15■■□□□ 1.14
NUP50-208ENST00000430547 KIF4BQ2VIQ3 1234 aa22.15■■□□□ 1.14
NUP50-208ENST00000430547 LDHAL6AQ6ZMR3 332 aa22.15■■□□□ 1.14
NUP50-208ENST00000430547 CDC37L1Q7L3B6 337 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms