RNA–Protein interactions for RNA: ENST00000429017.2

HOXD8-202, Transcript of homeobox D8, humanhuman

TSL 2 BASIC

Gene HOXD8, Length 1,608 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-202ENST00000429017 NXF1Q9UBU9 619 aaKnown RBP8.97□□□□□ -0.97
HOXD8-202ENST00000429017 PARP3Q9Y6F1 533 aa8.97□□□□□ -0.97
HOXD8-202ENST00000429017 USP42Q9H9J4 1324 aaKnown RBP8.96□□□□□ -0.97
HOXD8-202ENST00000429017 SCN11AQ9UI33 1791 aa8.96□□□□□ -0.97
HOXD8-202ENST00000429017 MORC1Q86VD1 984 aa8.96□□□□□ -0.98
HOXD8-202ENST00000429017 NPAS3Q8IXF0 933 aa8.96□□□□□ -0.98
HOXD8-202ENST00000429017 DNAJC5GQ8N7S2 189 aa8.96□□□□□ -0.98
HOXD8-202ENST00000429017 LGR6Q9HBX8 967 aa8.96□□□□□ -0.98
HOXD8-202ENST00000429017 ARFGEF1Q9Y6D6 1849 aa8.96□□□□□ -0.98
HOXD8-202ENST00000429017 CLSPNQ9HAW4 1339 aa8.95□□□□□ -0.98
HOXD8-202ENST00000429017 POLRMTO00411 1230 aaKnown RBP8.95□□□□□ -0.98
HOXD8-202ENST00000429017 TM4SF1P30408 202 aa8.95□□□□□ -0.98
HOXD8-202ENST00000429017 CHRNA5P30532 468 aa8.95□□□□□ -0.98
HOXD8-202ENST00000429017 C1orf141Q5JVX7 400 aa8.95□□□□□ -0.98
HOXD8-202ENST00000429017 C9orf131Q5VYM1 1079 aa8.95□□□□□ -0.98
HOXD8-202ENST00000429017 SULF1Q8IWU6 871 aa8.95□□□□□ -0.98
HOXD8-202ENST00000429017 DNAJC10Q8IXB1 793 aa8.95□□□□□ -0.98
HOXD8-202ENST00000429017 TSHZ2Q9NRE2 1034 aa8.95□□□□□ -0.98
HOXD8-202ENST00000429017 TOMM70O94826 608 aa8.94□□□□□ -0.98
HOXD8-202ENST00000429017 SLC39A6Q13433 755 aa8.94□□□□□ -0.98
HOXD8-202ENST00000429017 ZSCAN1Q8NBB4 408 aa8.94□□□□□ -0.98
HOXD8-202ENST00000429017 KCPQ6ZWJ8 1503 aa8.94□□□□□ -0.98
HOXD8-202ENST00000429017 SOS1Q07889 1333 aaPredicted RBP8.94□□□□□ -0.98
HOXD8-202ENST00000429017 FAM181BA6NEQ2 426 aa8.94□□□□□ -0.98
HOXD8-202ENST00000429017 WNT7BP56706 349 aa8.94□□□□□ -0.98
HOXD8-202ENST00000429017 HTRA3P83110 453 aa8.94□□□□□ -0.98
HOXD8-202ENST00000429017 USPL1Q5W0Q7 1092 aa8.94□□□□□ -0.98
HOXD8-202ENST00000429017 SLC52A2Q9HAB3 445 aa8.94□□□□□ -0.98
HOXD8-202ENST00000429017 PIM2Q9P1W9 311 aa8.94□□□□□ -0.98
HOXD8-202ENST00000429017 MRC1P22897 1456 aa8.93□□□□□ -0.98
HOXD8-202ENST00000429017 RNMTO43148 476 aaKnown RBP8.93□□□□□ -0.98
HOXD8-202ENST00000429017 CYP19A1P11511 503 aaPredicted RBP8.93□□□□□ -0.98
HOXD8-202ENST00000429017 PRELPP51888 382 aa8.93□□□□□ -0.98
HOXD8-202ENST00000429017 AKAP4Q5JQC9 854 aa8.93□□□□□ -0.98
HOXD8-202ENST00000429017 TRIM46Q7Z4K8 759 aa8.93□□□□□ -0.98
HOXD8-202ENST00000429017 AFDNP55196 1824 aaKnown RBP8.92□□□□□ -0.98
HOXD8-202ENST00000429017 VIRMAQ69YN4 1812 aaKnown RBP8.92□□□□□ -0.98
HOXD8-202ENST00000429017 HMOX1P09601 288 aa8.92□□□□□ -0.98
HOXD8-202ENST00000429017 NFIXQ14938 502 aa8.92□□□□□ -0.98
HOXD8-202ENST00000429017 DALRD3Q5D0E6 543 aaKnown RBP8.92□□□□□ -0.98
HOXD8-202ENST00000429017 RBM26Q5T8P6 1007 aaKnown RBP8.92□□□□□ -0.98
HOXD8-202ENST00000429017 ZBTB1Q9Y2K1 713 aa8.92□□□□□ -0.98
HOXD8-202ENST00000429017 SBF1O95248 1867 aa8.92□□□□□ -0.98
HOXD8-202ENST00000429017 NRXN2Q9P2S2 1712 aa8.92□□□□□ -0.98
HOXD8-202ENST00000429017 WDR90Q96KV7 1748 aa8.91□□□□□ -0.98
HOXD8-202ENST00000429017 H3BM21 787 aa8.91□□□□□ -0.98
HOXD8-202ENST00000429017 SIAH2O43255 324 aa8.91□□□□□ -0.98
HOXD8-202ENST00000429017 RASSF7Q02833 373 aa8.91□□□□□ -0.98
HOXD8-202ENST00000429017 MTHFSDQ2M296 383 aaKnown RBP8.91□□□□□ -0.98
HOXD8-202ENST00000429017 Q3C1V9 767 aa8.91□□□□□ -0.98
HOXD8-202ENST00000429017 RNF181Q9P0P0 153 aa8.91□□□□□ -0.98
HOXD8-202ENST00000429017 KNSTRNQ9Y448 316 aa8.91□□□□□ -0.98
HOXD8-202ENST00000429017 ERBB4Q15303 1308 aa8.91□□□□□ -0.98
HOXD8-202ENST00000429017 USB1Q9BQ65 265 aaKnown RBP8.91□□□□□ -0.98
HOXD8-202ENST00000429017 RRAGCQ9HB90 399 aa8.91□□□□□ -0.98
HOXD8-202ENST00000429017 NARFQ9UHQ1 456 aa8.91□□□□□ -0.98
HOXD8-202ENST00000429017 CARMIL3Q8ND23 1372 aa8.91□□□□□ -0.98
HOXD8-202ENST00000429017 KIF7Q2M1P5 1343 aa8.9□□□□□ -0.98
HOXD8-202ENST00000429017 UBR2Q8IWV8 1755 aa8.9□□□□□ -0.98
HOXD8-202ENST00000429017 COL15A1P39059 1388 aa8.9□□□□□ -0.99
HOXD8-202ENST00000429017 TESPA1A2RU30 521 aaPredicted RBP8.9□□□□□ -0.99
HOXD8-202ENST00000429017 PER1O15534 1290 aaPredicted RBP8.9□□□□□ -0.99
HOXD8-202ENST00000429017 GRIPAP1Q4V328 841 aa8.9□□□□□ -0.99
HOXD8-202ENST00000429017 IRF7Q92985 503 aa8.9□□□□□ -0.99
HOXD8-202ENST00000429017 SERPINB2P05120 415 aa8.89□□□□□ -0.99
HOXD8-202ENST00000429017 DLEC1Q9Y238 1755 aa8.89□□□□□ -0.99
HOXD8-202ENST00000429017 COL3A1P02461 1466 aaPredicted RBP8.88□□□□□ -0.99
HOXD8-202ENST00000429017 CD46P15529 392 aa8.88□□□□□ -0.99
HOXD8-202ENST00000429017 CANXP27824 592 aaKnown RBP8.88□□□□□ -0.99
HOXD8-202ENST00000429017 TNRC6CQ9HCJ0 1690 aaKnown RBP8.88□□□□□ -0.99
HOXD8-202ENST00000429017 NFKBIEO00221 500 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 BMP1P13497 986 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 EIF5P55010 431 aaKnown RBP8.87□□□□□ -0.99
HOXD8-202ENST00000429017 FSTL1Q12841 308 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 CC2D1BQ5T0F9 858 aaKnown RBP8.87□□□□□ -0.99
HOXD8-202ENST00000429017 VSIG10Q8N0Z9 540 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 IL17REQ8NFR9 667 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 KLRG1Q96E93 195 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 ANKRD31Q8N7Z5 1873 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 KDM2BQ8NHM5 1336 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 DIAPH1O60610 1272 aaKnown RBP8.87□□□□□ -0.99
HOXD8-202ENST00000429017 TBC1D9BQ66K14 1250 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 BICDL1Q6ZP65 573 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 C2CD5Q86YS7 1000 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 C16orf71Q8IYS4 520 aaPredicted RBP8.87□□□□□ -0.99
HOXD8-202ENST00000429017 CCDC24Q8N4L8 307 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 JMYQ8N9B5 988 aa8.87□□□□□ -0.99
HOXD8-202ENST00000429017 ZNF496Q96IT1 587 aaPredicted RBP8.87□□□□□ -0.99
HOXD8-202ENST00000429017 SIPA1L3O60292 1781 aaPredicted RBP8.86□□□□□ -0.99
HOXD8-202ENST00000429017 ALDH1A1P00352 501 aa8.86□□□□□ -0.99
HOXD8-202ENST00000429017 TTLL6Q8N841 843 aa8.86□□□□□ -0.99
HOXD8-202ENST00000429017 CCDC88AQ3V6T2 1871 aa8.86□□□□□ -0.99
HOXD8-202ENST00000429017 COL11A2P13942 1736 aaPredicted RBP8.86□□□□□ -0.99
HOXD8-202ENST00000429017 SCN7AQ01118 1682 aa8.85□□□□□ -0.99
HOXD8-202ENST00000429017 GLTPD2A6NH11 291 aa8.85□□□□□ -0.99
HOXD8-202ENST00000429017 KCNQ3O43525 872 aa8.85□□□□□ -0.99
HOXD8-202ENST00000429017 LMNB1P20700 586 aa8.85□□□□□ -0.99
HOXD8-202ENST00000429017 VEGFBP49765 207 aa8.85□□□□□ -0.99
HOXD8-202ENST00000429017 COL13A1Q5TAT6 717 aaPredicted RBP8.85□□□□□ -0.99
HOXD8-202ENST00000429017 CCER1Q8TC90 406 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms