RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 ANKRD18AQ8IVF6 992 aa15.41■□□□□ 0.06
TTC3-208ENST00000428693 MICALL2Q8IY33 904 aa15.41■□□□□ 0.06
TTC3-208ENST00000428693 FAM9BQ8IZU0 186 aa15.41■□□□□ 0.06
TTC3-208ENST00000428693 TBC1D16Q8TBP0 767 aa15.41■□□□□ 0.06
TTC3-208ENST00000428693 GLIS2Q9BZE0 524 aaPredicted RBP15.41■□□□□ 0.06
TTC3-208ENST00000428693 CWF19L2Q2TBE0 894 aaKnown RBP15.4■□□□□ 0.06
TTC3-208ENST00000428693 G2E3Q7L622 706 aa15.4■□□□□ 0.06
TTC3-208ENST00000428693 TRPM4Q8TD43 1214 aa15.4■□□□□ 0.06
TTC3-208ENST00000428693 KCNQ5Q9NR82 932 aa15.4■□□□□ 0.06
TTC3-208ENST00000428693 GGA1Q9UJY5 639 aa15.4■□□□□ 0.06
TTC3-208ENST00000428693 COL4A1P02462 1669 aa15.39■□□□□ 0.05
TTC3-208ENST00000428693 FOXN1O15353 648 aa15.39■□□□□ 0.05
TTC3-208ENST00000428693 CELF2O95319 508 aaKnown RBP15.39■□□□□ 0.05
TTC3-208ENST00000428693 FKBP5Q13451 457 aaPredicted RBP15.39■□□□□ 0.05
TTC3-208ENST00000428693 TBC1D10BQ4KMP7 808 aaPredicted RBP15.39■□□□□ 0.05
TTC3-208ENST00000428693 DUOX1Q9NRD9 1551 aa15.39■□□□□ 0.05
TTC3-208ENST00000428693 WDR33Q9C0J8 1336 aaKnown RBP15.39■□□□□ 0.05
TTC3-208ENST00000428693 LRRC37AA6NMS7 1700 aa15.38■□□□□ 0.05
TTC3-208ENST00000428693 RASSF10A6NK89 507 aa15.38■□□□□ 0.05
TTC3-208ENST00000428693 IGKV5-2P06315 115 aa15.38■□□□□ 0.05
TTC3-208ENST00000428693 HIRAP54198 1017 aaPredicted RBP15.38■□□□□ 0.05
TTC3-208ENST00000428693 CTSWP56202 376 aa15.38■□□□□ 0.05
TTC3-208ENST00000428693 SAMD7Q7Z3H4 446 aa15.38■□□□□ 0.05
TTC3-208ENST00000428693 CDC5LQ99459 802 aaKnown RBP15.38■□□□□ 0.05
TTC3-208ENST00000428693 IL16Q14005 1332 aa15.38■□□□□ 0.05
TTC3-208ENST00000428693 CDHR2Q9BYE9 1310 aa15.38■□□□□ 0.05
TTC3-208ENST00000428693 FANCIQ9NVI1 1328 aa15.38■□□□□ 0.05
TTC3-208ENST00000428693 FLIIQ13045 1269 aa15.37■□□□□ 0.05
TTC3-208ENST00000428693 CST9Q5W186 159 aa15.37■□□□□ 0.05
TTC3-208ENST00000428693 CYP4F22Q6NT55 531 aa15.37■□□□□ 0.05
TTC3-208ENST00000428693 UBE3BQ7Z3V4 1068 aa15.37■□□□□ 0.05
TTC3-208ENST00000428693 USP48Q86UV5 1035 aa15.37■□□□□ 0.05
TTC3-208ENST00000428693 CAPNS2Q96L46 248 aa15.37■□□□□ 0.05
TTC3-208ENST00000428693 NEURL1BA8MQ27 555 aa15.36■□□□□ 0.05
TTC3-208ENST00000428693 ECE1P42892 770 aa15.36■□□□□ 0.05
TTC3-208ENST00000428693 CTCFP49711 727 aaPredicted RBP15.36■□□□□ 0.05
TTC3-208ENST00000428693 EXOSC9Q06265 439 aaKnown RBP15.36■□□□□ 0.05
TTC3-208ENST00000428693 CDC37L1Q7L3B6 337 aa15.36■□□□□ 0.05
TTC3-208ENST00000428693 FBXW7Q969H0 707 aa15.36■□□□□ 0.05
TTC3-208ENST00000428693 BEGAINQ9BUH8 593 aa15.36■□□□□ 0.05
TTC3-208ENST00000428693 GREM2Q9H772 168 aa15.36■□□□□ 0.05
TTC3-208ENST00000428693 XDHP47989 1333 aa15.36■□□□□ 0.05
TTC3-208ENST00000428693 TRPM7Q96QT4 1865 aa15.35■□□□□ 0.05
TTC3-208ENST00000428693 MAP2K1Q02750 393 aaPredicted RBP15.35■□□□□ 0.05
TTC3-208ENST00000428693 WDR63Q8IWG1 891 aa15.35■□□□□ 0.05
TTC3-208ENST00000428693 TTLL11Q8NHH1 800 aa15.35■□□□□ 0.05
TTC3-208ENST00000428693 ZC3H15Q8WU90 426 aaKnown RBP15.35■□□□□ 0.05
TTC3-208ENST00000428693 DPF2Q92785 391 aa15.35■□□□□ 0.05
TTC3-208ENST00000428693 PODXL2Q9NZ53 605 aa15.35■□□□□ 0.05
TTC3-208ENST00000428693 ATP2B4P23634 1241 aa15.34■□□□□ 0.05
TTC3-208ENST00000428693 RPS12P25398 132 aaKnown RBP15.34■□□□□ 0.05
TTC3-208ENST00000428693 IGHMBP2P38935 993 aaKnown RBP15.34■□□□□ 0.05
TTC3-208ENST00000428693 LBX1P52954 281 aa15.34■□□□□ 0.05
TTC3-208ENST00000428693 DLK2Q6UY11 383 aa15.34■□□□□ 0.05
TTC3-208ENST00000428693 DNAAF4Q8WXU2 420 aa15.34■□□□□ 0.05
TTC3-208ENST00000428693 DCPSQ96C86 337 aaKnown RBP15.34■□□□□ 0.05
TTC3-208ENST00000428693 MYH16Q9H6N6 1097 aa15.34■□□□□ 0.05
TTC3-208ENST00000428693 WBP1LQ9NX94 342 aa15.34■□□□□ 0.05
TTC3-208ENST00000428693 TLL2Q9Y6L7 1015 aa15.34■□□□□ 0.05
TTC3-208ENST00000428693 RTL9Q8NET4 1388 aa15.34■□□□□ 0.05
TTC3-208ENST00000428693 EGFRP00533 1210 aa15.33■□□□□ 0.04
TTC3-208ENST00000428693 GCKRQ14397 625 aa15.33■□□□□ 0.04
TTC3-208ENST00000428693 KIF4BQ2VIQ3 1234 aa15.33■□□□□ 0.04
TTC3-208ENST00000428693 KRT26Q7Z3Y9 468 aa15.33■□□□□ 0.04
TTC3-208ENST00000428693 MPHOSPH8Q99549 860 aa15.33■□□□□ 0.04
TTC3-208ENST00000428693 CHMP3Q9Y3E7 222 aa15.33■□□□□ 0.04
TTC3-208ENST00000428693 SPEF2Q9C093 1822 aa15.33■□□□□ 0.04
TTC3-208ENST00000428693 H7C1W4 665 aa15.32■□□□□ 0.04
TTC3-208ENST00000428693 AOC2O75106 756 aa15.32■□□□□ 0.04
TTC3-208ENST00000428693 VAMP4O75379 141 aa15.32■□□□□ 0.04
TTC3-208ENST00000428693 VIL1P09327 827 aaKnown RBP15.32■□□□□ 0.04
TTC3-208ENST00000428693 PGAP2Q9UHJ9 254 aa15.32■□□□□ 0.04
TTC3-208ENST00000428693 MINPP1Q9UNW1 487 aa15.32■□□□□ 0.04
TTC3-208ENST00000428693 MYH3P11055 1940 aa15.31■□□□□ 0.04
TTC3-208ENST00000428693 WTIPA6NIX2 430 aaPredicted RBP15.31■□□□□ 0.04
TTC3-208ENST00000428693 ADM5C9JUS6 153 aa15.31■□□□□ 0.04
TTC3-208ENST00000428693 F6X3S4 739 aa15.31■□□□□ 0.04
TTC3-208ENST00000428693 ITGA6P23229 1130 aa15.31■□□□□ 0.04
TTC3-208ENST00000428693 KCNJ4P48050 445 aa15.31■□□□□ 0.04
TTC3-208ENST00000428693 FAM161AQ3B820 660 aa15.31■□□□□ 0.04
TTC3-208ENST00000428693 SAPCD2Q86UD0 394 aa15.31■□□□□ 0.04
TTC3-208ENST00000428693 LINS1Q8NG48 757 aa15.31■□□□□ 0.04
TTC3-208ENST00000428693 BSDC1Q9NW68 430 aaPredicted RBP15.31■□□□□ 0.04
TTC3-208ENST00000428693 CCT4P50991 539 aaKnown RBP15.3■□□□□ 0.04
TTC3-208ENST00000428693 HUNKP57058 714 aa15.3■□□□□ 0.04
TTC3-208ENST00000428693 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
TTC3-208ENST00000428693 RSBN1LQ6PCB5 846 aaPredicted RBP15.3■□□□□ 0.04
TTC3-208ENST00000428693 SULF1Q8IWU6 871 aa15.3■□□□□ 0.04
TTC3-208ENST00000428693 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
TTC3-208ENST00000428693 PRDM10Q9NQV6 1147 aa15.3■□□□□ 0.04
TTC3-208ENST00000428693 GGA3Q9NZ52 723 aa15.3■□□□□ 0.04
TTC3-208ENST00000428693 TSKSQ9UJT2 592 aa15.3■□□□□ 0.04
TTC3-208ENST00000428693 POLR2AP24928 1970 aaKnown RBP15.29■□□□□ 0.04
TTC3-208ENST00000428693 SCN9AQ15858 1988 aa15.29■□□□□ 0.04
TTC3-208ENST00000428693 USP17L3A6NCW0 530 aa15.29■□□□□ 0.04
TTC3-208ENST00000428693 USP17L4A6NCW7 530 aa15.29■□□□□ 0.04
TTC3-208ENST00000428693 SLC4A10Q6U841 1118 aa15.29■□□□□ 0.04
TTC3-208ENST00000428693 USP17L1Q7RTZ2 530 aa15.29■□□□□ 0.04
TTC3-208ENST00000428693 ASTN2O75129 1339 aaPredicted RBP15.28■□□□□ 0.04
TTC3-208ENST00000428693 ANKRD18BA2A2Z9 1011 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms