RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 NIP7Q9Y221 180 aaKnown RBP eCLIP26.15■■□□□ 1.78
CNEP1R1-202ENST00000427478 CPA1P15085 419 aa26.15■■□□□ 1.78
CNEP1R1-202ENST00000427478 PARP10Q53GL7 1025 aa26.15■■□□□ 1.78
CNEP1R1-202ENST00000427478 TTC39AQ5SRH9 613 aa26.15■■□□□ 1.78
CNEP1R1-202ENST00000427478 DDX11L8A8MPP1 907 aa26.14■■□□□ 1.78
CNEP1R1-202ENST00000427478 ZKSCAN1P17029 563 aaPredicted RBP26.14■■□□□ 1.78
CNEP1R1-202ENST00000427478 NUCB2P80303 420 aa26.14■■□□□ 1.78
CNEP1R1-202ENST00000427478 CCDC158Q5M9N0 1113 aa26.14■■□□□ 1.78
CNEP1R1-202ENST00000427478 SEC62Q99442 399 aaKnown RBP26.14■■□□□ 1.78
CNEP1R1-202ENST00000427478 SLC27A2O14975 620 aa26.14■■□□□ 1.77
CNEP1R1-202ENST00000427478 TAF5LO75529 589 aa26.14■■□□□ 1.77
CNEP1R1-202ENST00000427478 HSPA1LP34931 641 aa26.14■■□□□ 1.77
CNEP1R1-202ENST00000427478 CCDC129Q6ZRS4 1044 aa26.14■■□□□ 1.77
CNEP1R1-202ENST00000427478 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.14■■□□□ 1.77
CNEP1R1-202ENST00000427478 AK7Q96M32 723 aa26.14■■□□□ 1.77
CNEP1R1-202ENST00000427478 AK2P54819 239 aa26.13■■□□□ 1.77
CNEP1R1-202ENST00000427478 PKP1Q13835 747 aa26.13■■□□□ 1.77
CNEP1R1-202ENST00000427478 ATP2B3Q16720 1220 aa26.13■■□□□ 1.77
CNEP1R1-202ENST00000427478 MCMDC2Q4G0Z9 681 aa26.12■■□□□ 1.77
CNEP1R1-202ENST00000427478 ZNF652Q9Y2D9 606 aa26.12■■□□□ 1.77
CNEP1R1-202ENST00000427478 NTSR2O95665 410 aa26.11■■□□□ 1.77
CNEP1R1-202ENST00000427478 TM6SF1Q9BZW5 370 aa26.11■■□□□ 1.77
CNEP1R1-202ENST00000427478 AFF2P51816 1311 aa26.11■■□□□ 1.77
CNEP1R1-202ENST00000427478 CYP2E1P05181 493 aaPredicted RBP26.11■■□□□ 1.77
CNEP1R1-202ENST00000427478 FKBP4Q02790 459 aaKnown RBP eCLIP26.11■■□□□ 1.77
CNEP1R1-202ENST00000427478 SLFNL1Q499Z3 407 aa26.11■■□□□ 1.77
CNEP1R1-202ENST00000427478 GJD4Q96KN9 370 aaPredicted RBP26.11■■□□□ 1.77
CNEP1R1-202ENST00000427478 ZSWIM6Q9HCJ5 1215 aa26.11■■□□□ 1.77
CNEP1R1-202ENST00000427478 SCN7AQ01118 1682 aa26.11■■□□□ 1.77
CNEP1R1-202ENST00000427478 CNTNAP4Q9C0A0 1308 aa26.1■■□□□ 1.77
CNEP1R1-202ENST00000427478 RNF20Q5VTR2 975 aa26.1■■□□□ 1.77
CNEP1R1-202ENST00000427478 VGLL2Q8N8G2 317 aa26.1■■□□□ 1.77
CNEP1R1-202ENST00000427478 CYP46A1Q9Y6A2 500 aa26.1■■□□□ 1.77
CNEP1R1-202ENST00000427478 INTS4Q96HW7 963 aaKnown RBP26.09■■□□□ 1.77
CNEP1R1-202ENST00000427478 LARP6Q9BRS8 491 aaKnown RBP26.09■■□□□ 1.77
CNEP1R1-202ENST00000427478 SBF2Q86WG5 1849 aa26.09■■□□□ 1.77
CNEP1R1-202ENST00000427478 RUFY3Q7L099 469 aa26.09■■□□□ 1.77
CNEP1R1-202ENST00000427478 PDRG1Q9NUG6 133 aa26.09■■□□□ 1.77
CNEP1R1-202ENST00000427478 RPAP1Q9BWH6 1393 aaPredicted RBP26.09■■□□□ 1.77
CNEP1R1-202ENST00000427478 SCARF1Q14162 830 aa26.08■■□□□ 1.77
CNEP1R1-202ENST00000427478 CASZ1Q86V15 1759 aa26.08■■□□□ 1.77
CNEP1R1-202ENST00000427478 TAF6LQ9Y6J9 622 aa26.08■■□□□ 1.76
CNEP1R1-202ENST00000427478 ARAP2Q8WZ64 1704 aa26.07■■□□□ 1.76
CNEP1R1-202ENST00000427478 PDE8BO95263 885 aa26.07■■□□□ 1.76
CNEP1R1-202ENST00000427478 VPS53Q5VIR6 699 aa26.07■■□□□ 1.76
CNEP1R1-202ENST00000427478 SMIM5Q71RC9 77 aa26.07■■□□□ 1.76
CNEP1R1-202ENST00000427478 HELLSQ9NRZ9 838 aa26.07■■□□□ 1.76
CNEP1R1-202ENST00000427478 LIMCH1Q9UPQ0 1083 aa26.07■■□□□ 1.76
CNEP1R1-202ENST00000427478 MYH7P12883 1935 aa26.07■■□□□ 1.76
CNEP1R1-202ENST00000427478 ABCC12Q96J65 1359 aa26.07■■□□□ 1.76
CNEP1R1-202ENST00000427478 AKAP11Q9UKA4 1901 aa26.07■■□□□ 1.76
CNEP1R1-202ENST00000427478 USPL1Q5W0Q7 1092 aa26.06■■□□□ 1.76
CNEP1R1-202ENST00000427478 LY75O60449 1722 aa26.06■■□□□ 1.76
CNEP1R1-202ENST00000427478 TRAK2O60296 914 aa26.06■■□□□ 1.76
CNEP1R1-202ENST00000427478 ZMYM1Q5SVZ6 1142 aa26.06■■□□□ 1.76
CNEP1R1-202ENST00000427478 CLEC4GQ6UXB4 293 aa26.06■■□□□ 1.76
CNEP1R1-202ENST00000427478 SEC31BQ9NQW1 1179 aa26.06■■□□□ 1.76
CNEP1R1-202ENST00000427478 HMG20BQ9P0W2 317 aa26.06■■□□□ 1.76
CNEP1R1-202ENST00000427478 RNF113AO15541 343 aaKnown RBP26.05■■□□□ 1.76
CNEP1R1-202ENST00000427478 BAG4O95429 457 aaKnown RBP26.05■■□□□ 1.76
CNEP1R1-202ENST00000427478 CLEC17AQ6ZS10 378 aa26.05■■□□□ 1.76
CNEP1R1-202ENST00000427478 TICAM2Q86XR7 235 aa26.05■■□□□ 1.76
CNEP1R1-202ENST00000427478 TAF1LQ8IZX4 1826 aa26.05■■□□□ 1.76
CNEP1R1-202ENST00000427478 PSMA5P28066 241 aa26.05■■□□□ 1.76
CNEP1R1-202ENST00000427478 ZAP70P43403 619 aa26.05■■□□□ 1.76
CNEP1R1-202ENST00000427478 CCDC152Q4G0S7 254 aa26.05■■□□□ 1.76
CNEP1R1-202ENST00000427478 ZDHHC9Q9Y397 364 aa26.05■■□□□ 1.76
CNEP1R1-202ENST00000427478 MROH5Q6ZUA9 1318 aa26.04■■□□□ 1.76
CNEP1R1-202ENST00000427478 PI16Q6UXB8 463 aa26.04■■□□□ 1.76
CNEP1R1-202ENST00000427478 HELBQ8NG08 1087 aaPredicted RBP26.04■■□□□ 1.76
CNEP1R1-202ENST00000427478 U3KPZ7 1027 aaPredicted RBP26.04■■□□□ 1.76
CNEP1R1-202ENST00000427478 ATRNO75882 1429 aa26.04■■□□□ 1.76
CNEP1R1-202ENST00000427478 HSP90B1P14625 803 aaKnown RBP26.03■■□□□ 1.76
CNEP1R1-202ENST00000427478 COL9A3Q14050 684 aaPredicted RBP26.03■■□□□ 1.76
CNEP1R1-202ENST00000427478 MPHOSPH8Q99549 860 aa26.03■■□□□ 1.76
CNEP1R1-202ENST00000427478 CCNL1Q9UK58 526 aaPredicted RBP26.03■■□□□ 1.76
CNEP1R1-202ENST00000427478 MAST3O60307 1309 aa26.03■■□□□ 1.76
CNEP1R1-202ENST00000427478 LARGE1O95461 756 aa26.02■■□□□ 1.76
CNEP1R1-202ENST00000427478 BLOC1S2Q6QNY1 142 aa26.02■■□□□ 1.76
CNEP1R1-202ENST00000427478 AEBP2Q6ZN18 517 aaPredicted RBP26.02■■□□□ 1.76
CNEP1R1-202ENST00000427478 MCAMP43121 646 aa26.02■■□□□ 1.76
CNEP1R1-202ENST00000427478 PUM3Q15397 648 aaKnown RBP26.02■■□□□ 1.76
CNEP1R1-202ENST00000427478 RC3H1Q5TC82 1133 aaKnown RBP26.02■■□□□ 1.76
CNEP1R1-202ENST00000427478 GNPATO15228 680 aa26.01■■□□□ 1.75
CNEP1R1-202ENST00000427478 TSGA10IPQ3SY00 556 aa26.01■■□□□ 1.75
CNEP1R1-202ENST00000427478 BICDL1Q6ZP65 573 aa26.01■■□□□ 1.75
CNEP1R1-202ENST00000427478 RTL9Q8NET4 1388 aa26.01■■□□□ 1.75
CNEP1R1-202ENST00000427478 M0R2C6 588 aa26■■□□□ 1.75
CNEP1R1-202ENST00000427478 TRPC5Q9UL62 973 aaPredicted RBP26■■□□□ 1.75
CNEP1R1-202ENST00000427478 COL4A1P02462 1669 aa26■■□□□ 1.75
CNEP1R1-202ENST00000427478 RPS6KA4O75676 772 aa26■■□□□ 1.75
CNEP1R1-202ENST00000427478 LRRFIP1Q32MZ4 808 aaKnown RBP26■■□□□ 1.75
CNEP1R1-202ENST00000427478 ERFEQ4G0M1 354 aa26■■□□□ 1.75
CNEP1R1-202ENST00000427478 FOXD4L5Q5VV16 416 aaPredicted RBP26■■□□□ 1.75
CNEP1R1-202ENST00000427478 FOXD4L4Q8WXT5 416 aaPredicted RBP26■■□□□ 1.75
CNEP1R1-202ENST00000427478 LPIN2Q92539 896 aa26■■□□□ 1.75
CNEP1R1-202ENST00000427478 MYO5AQ9Y4I1 1855 aaKnown RBP26■■□□□ 1.75
CNEP1R1-202ENST00000427478 LAMA4Q16363 1823 aa25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 GOLGA6L22H0YM25 854 aa25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 RPS6KB1P23443 525 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms