RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 SCAND2PQ9GZW5 306 aaPredicted RBP16.98■□□□□ 0.31
ERCC3-202ENST00000426778 BCL2L12Q9HB09 334 aa16.98■□□□□ 0.31
ERCC3-202ENST00000426778 SPTLC3Q9NUV7 552 aa16.98■□□□□ 0.31
ERCC3-202ENST00000426778 TTLL5Q6EMB2 1281 aa16.97■□□□□ 0.31
ERCC3-202ENST00000426778 SPDYE4A6NLX3 237 aa16.97■□□□□ 0.31
ERCC3-202ENST00000426778 KDM6AO15550 1401 aaPredicted RBP16.97■□□□□ 0.31
ERCC3-202ENST00000426778 OTUD7BQ6GQQ9 843 aa16.97■□□□□ 0.31
ERCC3-202ENST00000426778 SNRKQ9NRH2 765 aa16.97■□□□□ 0.31
ERCC3-202ENST00000426778 KIF3AQ9Y496 699 aa16.97■□□□□ 0.31
ERCC3-202ENST00000426778 PHKG2P15735 406 aa16.97■□□□□ 0.31
ERCC3-202ENST00000426778 ATP5JP18859 108 aa16.97■□□□□ 0.31
ERCC3-202ENST00000426778 RESTQ13127 1097 aa16.97■□□□□ 0.31
ERCC3-202ENST00000426778 NAA30Q147X3 362 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-202ENST00000426778 CCDC144BQ3MJ40 725 aa16.96■□□□□ 0.31
ERCC3-202ENST00000426778 C11orf57Q6ZUT1 292 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-202ENST00000426778 CCDC144CPQ8IYA2 1237 aa16.96■□□□□ 0.31
ERCC3-202ENST00000426778 CLSTN2Q9H4D0 955 aa16.96■□□□□ 0.31
ERCC3-202ENST00000426778 CYP27B1O15528 508 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 HAND2P61296 217 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 MCMDC2Q4G0Z9 681 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 C5P01031 1676 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 ELP1O95163 1332 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 LRRC24Q50LG9 513 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 TTLL7Q6ZT98 887 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 PRIMPOLQ96LW4 560 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 GOLPH3LQ9H4A5 285 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 ZBTB3Q9H5J0 574 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 GJB4Q9NTQ9 266 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 HMG20BQ9P0W2 317 aa16.95■□□□□ 0.3
ERCC3-202ENST00000426778 TATP17735 454 aaPredicted RBP16.94■□□□□ 0.3
ERCC3-202ENST00000426778 PPP4R3BQ5MIZ7 849 aa16.94■□□□□ 0.3
ERCC3-202ENST00000426778 ZNF592Q92610 1267 aa16.94■□□□□ 0.3
ERCC3-202ENST00000426778 GOLGA6L6A8MZA4 724 aa16.94■□□□□ 0.3
ERCC3-202ENST00000426778 CTDNEP1O95476 244 aa16.94■□□□□ 0.3
ERCC3-202ENST00000426778 ZNF75DP51815 510 aa16.94■□□□□ 0.3
ERCC3-202ENST00000426778 LRP10Q7Z4F1 713 aa16.94■□□□□ 0.3
ERCC3-202ENST00000426778 MAP7D2Q96T17 732 aa16.94■□□□□ 0.3
ERCC3-202ENST00000426778 ADGRL3Q9HAR2 1447 aa16.94■□□□□ 0.3
ERCC3-202ENST00000426778 PTPDC1A2A3K4 754 aa16.93■□□□□ 0.3
ERCC3-202ENST00000426778 PROSER2Q86WR7 435 aaPredicted RBP16.93■□□□□ 0.3
ERCC3-202ENST00000426778 USP28Q96RU2 1077 aa16.93■□□□□ 0.3
ERCC3-202ENST00000426778 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
ERCC3-202ENST00000426778 HMGN5P82970 282 aaKnown RBP16.93■□□□□ 0.3
ERCC3-202ENST00000426778 USPL1Q5W0Q7 1092 aa16.93■□□□□ 0.3
ERCC3-202ENST00000426778 CCAR1Q8IX12 1150 aaKnown RBP16.93■□□□□ 0.3
ERCC3-202ENST00000426778 CACTINQ8WUQ7 758 aaKnown RBP16.93■□□□□ 0.3
ERCC3-202ENST00000426778 PUS3Q9BZE2 481 aaKnown RBP16.93■□□□□ 0.3
ERCC3-202ENST00000426778 DDX19AQ9NUU7 478 aaKnown RBP16.93■□□□□ 0.3
ERCC3-202ENST00000426778 CLIP2Q9UDT6 1046 aa16.93■□□□□ 0.3
ERCC3-202ENST00000426778 ATP2B3Q16720 1220 aa16.93■□□□□ 0.3
ERCC3-202ENST00000426778 NCAPD2Q15021 1401 aa16.92■□□□□ 0.3
ERCC3-202ENST00000426778 USP54Q70EL1 1684 aa16.92■□□□□ 0.3
ERCC3-202ENST00000426778 NSUN7Q8NE18 718 aaKnown RBP16.92■□□□□ 0.3
ERCC3-202ENST00000426778 MEGF6O75095 1541 aa16.92■□□□□ 0.3
ERCC3-202ENST00000426778 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
ERCC3-202ENST00000426778 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
ERCC3-202ENST00000426778 FILIP1Q7Z7B0 1213 aa16.92■□□□□ 0.3
ERCC3-202ENST00000426778 HAUS7Q99871 368 aa16.92■□□□□ 0.3
ERCC3-202ENST00000426778 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
ERCC3-202ENST00000426778 CHD2O14647 1828 aaKnown RBP16.92■□□□□ 0.3
ERCC3-202ENST00000426778 A1BGP04217 495 aa16.91■□□□□ 0.3
ERCC3-202ENST00000426778 CABP4P57796 275 aa16.91■□□□□ 0.3
ERCC3-202ENST00000426778 KRT32Q14532 448 aa16.91■□□□□ 0.3
ERCC3-202ENST00000426778 PAG1Q9NWQ8 432 aa16.91■□□□□ 0.3
ERCC3-202ENST00000426778 CHAF1AQ13111 956 aaPredicted RBP16.91■□□□□ 0.3
ERCC3-202ENST00000426778 KBTBD3Q8NAB2 608 aa16.91■□□□□ 0.3
ERCC3-202ENST00000426778 NBPF26B4DH59 902 aa16.9■□□□□ 0.3
ERCC3-202ENST00000426778 IGSF3O75054 1194 aa16.9■□□□□ 0.3
ERCC3-202ENST00000426778 POLR3DP05423 398 aaPredicted RBP16.9■□□□□ 0.3
ERCC3-202ENST00000426778 ADD1P35611 737 aaKnown RBP16.9■□□□□ 0.3
ERCC3-202ENST00000426778 ME1P48163 572 aa16.9■□□□□ 0.3
ERCC3-202ENST00000426778 NBPF14Q5TI25 921 aa16.9■□□□□ 0.3
ERCC3-202ENST00000426778 NBPF10Q6P3W6 841 aaKnown RBP16.9■□□□□ 0.3
ERCC3-202ENST00000426778 IFNL2Q8IZJ0 200 aa16.9■□□□□ 0.3
ERCC3-202ENST00000426778 NBPF15Q8N660 670 aa16.9■□□□□ 0.3
ERCC3-202ENST00000426778 USP27XA6NNY8 438 aa16.9■□□□□ 0.3
ERCC3-202ENST00000426778 U2AF2P26368 475 aaKnown RBP eCLIP16.9■□□□□ 0.31e-7■□□□□ 8.7
ERCC3-202ENST00000426778 TSGA10IPQ3SY00 556 aa16.9■□□□□ 0.3
ERCC3-202ENST00000426778 SYTL4Q96C24 671 aaPredicted RBP16.9■□□□□ 0.3
ERCC3-202ENST00000426778 CCDC94Q9BW85 323 aaPredicted RBP16.9■□□□□ 0.3
ERCC3-202ENST00000426778 PI16Q6UXB8 463 aa16.9■□□□□ 0.3
ERCC3-202ENST00000426778 ATG9AQ7Z3C6 839 aa16.9■□□□□ 0.3
ERCC3-202ENST00000426778 PLA2G4DQ86XP0 818 aa16.9■□□□□ 0.3
ERCC3-202ENST00000426778 FMNL2Q96PY5 1086 aa16.9■□□□□ 0.3
ERCC3-202ENST00000426778 E7EWF7 191 aa16.89■□□□□ 0.29
ERCC3-202ENST00000426778 ZHX1Q9UKY1 873 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-202ENST00000426778 JCADQ9P266 1359 aa16.89■□□□□ 0.29
ERCC3-202ENST00000426778 A0A1B0GVL5 298 aa16.89■□□□□ 0.29
ERCC3-202ENST00000426778 GOLGA6L19H0YKK7 550 aa16.89■□□□□ 0.29
ERCC3-202ENST00000426778 M0R2C6 588 aa16.89■□□□□ 0.29
ERCC3-202ENST00000426778 HSPD1P10809 573 aaKnown RBP16.89■□□□□ 0.29
ERCC3-202ENST00000426778 ISM2Q6H9L7 571 aa16.89■□□□□ 0.29
ERCC3-202ENST00000426778 DHX32Q7L7V1 743 aaKnown RBP16.89■□□□□ 0.29
ERCC3-202ENST00000426778 TRMT1Q9NXH9 659 aaKnown RBP16.89■□□□□ 0.29
ERCC3-202ENST00000426778 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.89■□□□□ 0.29
ERCC3-202ENST00000426778 V9GYY5 206 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-202ENST00000426778 FOXO4P98177 505 aa16.88■□□□□ 0.29
ERCC3-202ENST00000426778 TNNT1P13805 278 aa16.88■□□□□ 0.29
ERCC3-202ENST00000426778 TPD52L1Q16890 204 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms