RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 PELP1Q8IZL8 1130 aaKnown RBP29.89■■■□□ 2.38
APOE-202ENST00000425718 A0A1B0GUL6 1792 aa29.88■■■□□ 2.37
APOE-202ENST00000425718 IL15P40933 162 aaPredicted RBP29.88■■■□□ 2.37
APOE-202ENST00000425718 G3BP1Q13283 466 aaKnown RBP eCLIP29.88■■■□□ 2.376e-37■□□□□ 10
APOE-202ENST00000425718 ERICH6BQ5W0A0 696 aa29.88■■■□□ 2.37
APOE-202ENST00000425718 SUPT20HQ8NEM7 779 aa29.88■■■□□ 2.37
APOE-202ENST00000425718 ZNF594Q96JF6 807 aaPredicted RBP29.88■■■□□ 2.37
APOE-202ENST00000425718 MPNDQ8N594 471 aa29.87■■■□□ 2.37
APOE-202ENST00000425718 MINPP1Q9UNW1 487 aa29.87■■■□□ 2.37
APOE-202ENST00000425718 XDHP47989 1333 aa29.87■■■□□ 2.37
APOE-202ENST00000425718 ERC1Q8IUD2 1116 aa29.86■■■□□ 2.37
APOE-202ENST00000425718 PODXL2Q9NZ53 605 aa29.86■■■□□ 2.37
APOE-202ENST00000425718 ANKIB1Q9P2G1 1089 aa29.86■■■□□ 2.37
APOE-202ENST00000425718 NOP58Q9Y2X3 529 aaKnown RBP29.86■■■□□ 2.37
APOE-202ENST00000425718 DPP8Q6V1X1 898 aaPredicted RBP29.85■■■□□ 2.37
APOE-202ENST00000425718 ZNF219Q9P2Y4 722 aaPredicted RBP29.85■■■□□ 2.37
APOE-202ENST00000425718 RIPOR2Q9Y4F9 1068 aa29.85■■■□□ 2.37
APOE-202ENST00000425718 COL4A1P02462 1669 aa29.85■■■□□ 2.37
APOE-202ENST00000425718 OS9Q13438 667 aaPredicted RBP29.84■■■□□ 2.37
APOE-202ENST00000425718 PSMD1Q99460 953 aa29.84■■■□□ 2.37
APOE-202ENST00000425718 WWC3Q9ULE0 1092 aa29.84■■■□□ 2.37
APOE-202ENST00000425718 LEMD3Q9Y2U8 911 aa29.84■■■□□ 2.37
APOE-202ENST00000425718 LTBP3Q9NS15 1303 aa29.84■■■□□ 2.37
APOE-202ENST00000425718 SURF6O75683 361 aaKnown RBP29.83■■■□□ 2.37
APOE-202ENST00000425718 ATP2B4P23634 1241 aa29.83■■■□□ 2.37
APOE-202ENST00000425718 CHRNDQ07001 517 aa29.83■■■□□ 2.37
APOE-202ENST00000425718 METTL24Q5JXM2 366 aa29.83■■■□□ 2.37
APOE-202ENST00000425718 KLHDC4Q8TBB5 520 aa29.83■■■□□ 2.37
APOE-202ENST00000425718 SIL1Q9H173 461 aa29.83■■■□□ 2.37
APOE-202ENST00000425718 VPS33BQ9H267 617 aa29.83■■■□□ 2.37
APOE-202ENST00000425718 RWDD1Q9H446 243 aaPredicted RBP29.83■■■□□ 2.37
APOE-202ENST00000425718 NSFL1CQ9UNZ2 370 aaKnown RBP29.83■■■□□ 2.37
APOE-202ENST00000425718 PCDHB15Q9Y5E8 787 aa29.83■■■□□ 2.37
APOE-202ENST00000425718 LTBP1Q14766 1721 aa29.82■■■□□ 2.36
APOE-202ENST00000425718 HDAC1Q13547 482 aaPredicted RBP29.82■■■□□ 2.36
APOE-202ENST00000425718 SIRT2Q8IXJ6 389 aa29.82■■■□□ 2.36
APOE-202ENST00000425718 EYA3Q99504 573 aa29.82■■■□□ 2.36
APOE-202ENST00000425718 CEP126Q9P2H0 1117 aa29.82■■■□□ 2.36
APOE-202ENST00000425718 GGA1Q9UJY5 639 aa29.82■■■□□ 2.36
APOE-202ENST00000425718 PA2G4Q9UQ80 394 aaKnown RBP29.82■■■□□ 2.36
APOE-202ENST00000425718 CCDC88AQ3V6T2 1871 aa29.81■■■□□ 2.36
APOE-202ENST00000425718 RAB11FIP3O75154 756 aa29.81■■■□□ 2.36
APOE-202ENST00000425718 YBX3P16989 372 aaKnown RBP eCLIP29.81■■■□□ 2.36
APOE-202ENST00000425718 FKBP4Q02790 459 aaKnown RBP eCLIP29.81■■■□□ 2.36
APOE-202ENST00000425718 TAOK3Q9H2K8 898 aa29.81■■■□□ 2.36
APOE-202ENST00000425718 KCNJ4P48050 445 aa29.8■■■□□ 2.36
APOE-202ENST00000425718 LRRC24Q50LG9 513 aa29.8■■■□□ 2.36
APOE-202ENST00000425718 RTFDC1Q9BY42 306 aaPredicted RBP29.8■■■□□ 2.36
APOE-202ENST00000425718 PUS3Q9BZE2 481 aaKnown RBP29.8■■■□□ 2.36
APOE-202ENST00000425718 SNED1Q8TER0 1413 aa29.79■■■□□ 2.36
APOE-202ENST00000425718 ARHGAP27Q6ZUM4 889 aa29.79■■■□□ 2.36
APOE-202ENST00000425718 ATG9AQ7Z3C6 839 aa29.79■■■□□ 2.36
APOE-202ENST00000425718 AKAP2Q9Y2D5 859 aa29.79■■■□□ 2.36
APOE-202ENST00000425718 DICER1Q9UPY3 1922 aaKnown RBP29.79■■■□□ 2.36
APOE-202ENST00000425718 SBF1O95248 1867 aa29.78■■■□□ 2.36
APOE-202ENST00000425718 GPSM2P81274 684 aa29.78■■■□□ 2.36
APOE-202ENST00000425718 UBE4AQ14139 1066 aa29.78■■■□□ 2.36
APOE-202ENST00000425718 PDE8BO95263 885 aa29.77■■■□□ 2.36
APOE-202ENST00000425718 CHD4Q14839 1912 aa29.77■■■□□ 2.36
APOE-202ENST00000425718 UFL1O94874 794 aa29.76■■■□□ 2.35
APOE-202ENST00000425718 GCC1Q96CN9 775 aa29.76■■■□□ 2.35
APOE-202ENST00000425718 DCTPP1Q9H773 170 aa29.76■■■□□ 2.35
APOE-202ENST00000425718 ZNF804BA4D1E1 1349 aa29.75■■■□□ 2.35
APOE-202ENST00000425718 C6orf229H3BNL8 230 aa29.75■■■□□ 2.35
APOE-202ENST00000425718 PUM3Q15397 648 aaKnown RBP29.75■■■□□ 2.35
APOE-202ENST00000425718 TBC1D16Q8TBP0 767 aa29.75■■■□□ 2.35
APOE-202ENST00000425718 KIF1BPQ96EK5 621 aa29.75■■■□□ 2.35
APOE-202ENST00000425718 OLFM4Q6UX06 510 aa29.74■■■□□ 2.35
APOE-202ENST00000425718 VGLL2Q8N8G2 317 aa29.74■■■□□ 2.35
APOE-202ENST00000425718 GPR108Q9NPR9 543 aa29.74■■■□□ 2.35
APOE-202ENST00000425718 GOLGB1Q14789 3259 aaKnown RBP29.73■■■□□ 2.35
APOE-202ENST00000425718 IFIT1P09914 478 aaKnown RBP29.73■■■□□ 2.35
APOE-202ENST00000425718 ZBTB47Q9UFB7 747 aaPredicted RBP29.73■■■□□ 2.35
APOE-202ENST00000425718 EXOC6BQ9Y2D4 811 aa29.73■■■□□ 2.35
APOE-202ENST00000425718 MED23Q9ULK4 1368 aa29.73■■■□□ 2.35
APOE-202ENST00000425718 DUOX1Q9NRD9 1551 aa29.73■■■□□ 2.35
APOE-202ENST00000425718 NFKBIEO00221 500 aa29.72■■■□□ 2.35
APOE-202ENST00000425718 SLC5A1P13866 664 aa29.72■■■□□ 2.35
APOE-202ENST00000425718 LPIN2Q92539 896 aa29.72■■■□□ 2.35
APOE-202ENST00000425718 ZC3H12CQ9C0D7 883 aaKnown RBP29.72■■■□□ 2.35
APOE-202ENST00000425718 TAF5LO75529 589 aa29.71■■■□□ 2.35
APOE-202ENST00000425718 LMNB1P20700 586 aa29.71■■■□□ 2.35
APOE-202ENST00000425718 WASHC4Q2M389 1173 aa29.71■■■□□ 2.35
APOE-202ENST00000425718 C15orf52Q6ZUT6 534 aaKnown RBP29.71■■■□□ 2.35
APOE-202ENST00000425718 HELBQ8NG08 1087 aaPredicted RBP29.71■■■□□ 2.35
APOE-202ENST00000425718 POLLQ9UGP5 575 aa29.71■■■□□ 2.35
APOE-202ENST00000425718 ARAP2Q8WZ64 1704 aa29.7■■■□□ 2.34
APOE-202ENST00000425718 IARSP41252 1262 aaKnown RBP29.69■■■□□ 2.34
APOE-202ENST00000425718 KIAA2012Q0VF49 1180 aa29.69■■■□□ 2.34
APOE-202ENST00000425718 TFCP2Q12800 502 aa29.69■■■□□ 2.34
APOE-202ENST00000425718 ATP2B3Q16720 1220 aa29.69■■■□□ 2.34
APOE-202ENST00000425718 LRRCC1Q9C099 1032 aa29.69■■■□□ 2.34
APOE-202ENST00000425718 PPIP5K2O43314 1243 aa29.68■■■□□ 2.34
APOE-202ENST00000425718 SASH1O94885 1247 aa29.68■■■□□ 2.34
APOE-202ENST00000425718 CLASRPQ8N2M8 674 aaKnown RBP29.68■■■□□ 2.34
APOE-202ENST00000425718 RHPN1Q8TCX5 695 aa29.68■■■□□ 2.34
APOE-202ENST00000425718 G3V3G9 751 aa29.67■■■□□ 2.34
APOE-202ENST00000425718 FGFR2P21802 821 aa29.67■■■□□ 2.34
APOE-202ENST00000425718 DCAF8Q5TAQ9 597 aa29.67■■■□□ 2.34
APOE-202ENST00000425718 JDP2Q8WYK2 163 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms