RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 UTP14AQ9BVJ6 771 aaKnown RBP16.41■□□□□ 0.22
SGCE-203ENST00000425444 RTFDC1Q9BY42 306 aaPredicted RBP16.41■□□□□ 0.22
SGCE-203ENST00000425444 HYPKQ9NX55 129 aa16.41■□□□□ 0.22
SGCE-203ENST00000425444 TBC1D10BQ4KMP7 808 aaPredicted RBP16.4■□□□□ 0.22
SGCE-203ENST00000425444 WWC1Q8IX03 1113 aa16.4■□□□□ 0.22
SGCE-203ENST00000425444 REM2Q8IYK8 340 aaPredicted RBP16.4■□□□□ 0.22
SGCE-203ENST00000425444 FAM9BQ8IZU0 186 aa16.4■□□□□ 0.22
SGCE-203ENST00000425444 ZNF296Q8WUU4 475 aaPredicted RBP16.4■□□□□ 0.22
SGCE-203ENST00000425444 TSR2Q969E8 191 aaKnown RBP16.4■□□□□ 0.22
SGCE-203ENST00000425444 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
SGCE-203ENST00000425444 SALL2Q9Y467 1007 aaPredicted RBP16.4■□□□□ 0.22
SGCE-203ENST00000425444 ANKRD36CQ5JPF3 1778 aa16.39■□□□□ 0.21
SGCE-203ENST00000425444 RBM26Q5T8P6 1007 aaKnown RBP16.39■□□□□ 0.21
SGCE-203ENST00000425444 MPNDQ8N594 471 aa16.39■□□□□ 0.21
SGCE-203ENST00000425444 YDJCA8MPS7 323 aa16.38■□□□□ 0.21
SGCE-203ENST00000425444 TBC1D8O95759 1140 aa16.38■□□□□ 0.21
SGCE-203ENST00000425444 FXR1P51114 621 aaKnown RBP eCLIP16.38■□□□□ 0.21
SGCE-203ENST00000425444 GOLGA2Q08379 1002 aa16.38■□□□□ 0.21
SGCE-203ENST00000425444 TCIRG1Q13488 830 aa16.38■□□□□ 0.21
SGCE-203ENST00000425444 ANKRD13DQ6ZTN6 518 aa16.38■□□□□ 0.21
SGCE-203ENST00000425444 NLRP10Q86W26 655 aa16.38■□□□□ 0.21
SGCE-203ENST00000425444 C8orf58Q8NAV2 365 aa16.38■□□□□ 0.21
SGCE-203ENST00000425444 PLBD2Q8NHP8 589 aa16.38■□□□□ 0.21
SGCE-203ENST00000425444 DPF2Q92785 391 aa16.38■□□□□ 0.21
SGCE-203ENST00000425444 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
SGCE-203ENST00000425444 CHMP4AQ9BY43 222 aa16.38■□□□□ 0.21
SGCE-203ENST00000425444 RANBP2P49792 3224 aaKnown RBP16.37■□□□□ 0.21
SGCE-203ENST00000425444 EGFRP00533 1210 aa16.37■□□□□ 0.21
SGCE-203ENST00000425444 FBXO46Q6PJ61 603 aaPredicted RBP16.37■□□□□ 0.21
SGCE-203ENST00000425444 RASAL3Q86YV0 1011 aa16.37■□□□□ 0.21
SGCE-203ENST00000425444 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
SGCE-203ENST00000425444 ABCC4O15439 1325 aa16.37■□□□□ 0.21
SGCE-203ENST00000425444 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
SGCE-203ENST00000425444 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
SGCE-203ENST00000425444 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
SGCE-203ENST00000425444 SULF1Q8IWU6 871 aa16.36■□□□□ 0.21
SGCE-203ENST00000425444 ZNF428Q96B54 188 aa16.36■□□□□ 0.21
SGCE-203ENST00000425444 IL16Q14005 1332 aa16.36■□□□□ 0.21
SGCE-203ENST00000425444 SH3TC1Q8TE82 1336 aa16.36■□□□□ 0.21
SGCE-203ENST00000425444 PSMD14O00487 310 aa16.35■□□□□ 0.21
SGCE-203ENST00000425444 BBOX1O75936 387 aa16.35■□□□□ 0.21
SGCE-203ENST00000425444 SP8Q8IXZ3 490 aa16.35■□□□□ 0.21
SGCE-203ENST00000425444 TSPYL6Q8N831 410 aa16.35■□□□□ 0.21
SGCE-203ENST00000425444 PHAXQ9H814 394 aaKnown RBP16.35■□□□□ 0.21
SGCE-203ENST00000425444 ATP5J2-PTCD1G3V325 749 aa16.34■□□□□ 0.21
SGCE-203ENST00000425444 HCLS1P14317 486 aaPredicted RBP16.34■□□□□ 0.21
SGCE-203ENST00000425444 CDCA5Q96FF9 252 aa16.34■□□□□ 0.21
SGCE-203ENST00000425444 STK31Q9BXU1 1019 aa16.34■□□□□ 0.21
SGCE-203ENST00000425444 DDX58O95786 925 aaKnown RBP16.33■□□□□ 0.2
SGCE-203ENST00000425444 TWISTNBQ3B726 338 aaPredicted RBP16.33■□□□□ 0.2
SGCE-203ENST00000425444 SLC10A5Q5PT55 438 aa16.33■□□□□ 0.2
SGCE-203ENST00000425444 GGA3Q9NZ52 723 aa16.33■□□□□ 0.2
SGCE-203ENST00000425444 GPR25O00155 361 aa16.32■□□□□ 0.2
SGCE-203ENST00000425444 WDR63Q8IWG1 891 aa16.32■□□□□ 0.2
SGCE-203ENST00000425444 ISCA1Q9BUE6 129 aa16.32■□□□□ 0.2
SGCE-203ENST00000425444 FANCIQ9NVI1 1328 aa16.32■□□□□ 0.2
SGCE-203ENST00000425444 COL6A3P12111 3177 aa16.31■□□□□ 0.2
SGCE-203ENST00000425444 RPS12P25398 132 aaKnown RBP16.31■□□□□ 0.2
SGCE-203ENST00000425444 KIF4BQ2VIQ3 1234 aa16.31■□□□□ 0.2
SGCE-203ENST00000425444 MYD88Q99836 296 aa16.31■□□□□ 0.2
SGCE-203ENST00000425444 DBNDD1Q9H9R9 158 aa16.31■□□□□ 0.2
SGCE-203ENST00000425444 ASTN2O75129 1339 aaPredicted RBP16.3■□□□□ 0.2
SGCE-203ENST00000425444 POTEFA5A3E0 1075 aa16.3■□□□□ 0.2
SGCE-203ENST00000425444 RTL5Q5HYW3 569 aaPredicted RBP16.3■□□□□ 0.2
SGCE-203ENST00000425444 DDX46Q7L014 1031 aaKnown RBP16.3■□□□□ 0.2
SGCE-203ENST00000425444 FAM89AQ96GI7 184 aa16.3■□□□□ 0.2
SGCE-203ENST00000425444 FKTNO75072 461 aa16.29■□□□□ 0.2
SGCE-203ENST00000425444 FKBP1BP68106 108 aa16.29■□□□□ 0.2
SGCE-203ENST00000425444 WASHC4Q2M389 1173 aa16.29■□□□□ 0.2
SGCE-203ENST00000425444 NOM1Q5C9Z4 860 aaKnown RBP16.29■□□□□ 0.2
SGCE-203ENST00000425444 LAMB2P55268 1798 aa16.28■□□□□ 0.2
SGCE-203ENST00000425444 DLL1O00548 723 aa16.28■□□□□ 0.2
SGCE-203ENST00000425444 RIMBP2O15034 1052 aa16.28■□□□□ 0.2
SGCE-203ENST00000425444 TRIM28Q13263 835 aaKnown RBP16.28■□□□□ 0.2
SGCE-203ENST00000425444 KCNQ5Q9NR82 932 aa16.28■□□□□ 0.2
SGCE-203ENST00000425444 IRS4O14654 1257 aaPredicted RBP16.27■□□□□ 0.2
SGCE-203ENST00000425444 GRAPQ13588 217 aa16.27■□□□□ 0.2
SGCE-203ENST00000425444 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
SGCE-203ENST00000425444 MOB2Q70IA6 237 aa16.27■□□□□ 0.2
SGCE-203ENST00000425444 GRAPLQ8TC17 118 aaPredicted RBP16.27■□□□□ 0.2
SGCE-203ENST00000425444 METTL22Q9BUU2 404 aaPredicted RBP16.27■□□□□ 0.2
SGCE-203ENST00000425444 MYH16Q9H6N6 1097 aa16.27■□□□□ 0.2
SGCE-203ENST00000425444 COLQQ9Y215 455 aaPredicted RBP16.27■□□□□ 0.2
SGCE-203ENST00000425444 MAP3K2Q9Y2U5 619 aa16.27■□□□□ 0.2
SGCE-203ENST00000425444 DDX60Q8IY21 1712 aaKnown RBP16.27■□□□□ 0.19
SGCE-203ENST00000425444 PAPPA2Q9BXP8 1791 aa16.26■□□□□ 0.19
SGCE-203ENST00000425444 PI4KAP2A4QPH2 592 aa16.26■□□□□ 0.19
SGCE-203ENST00000425444 UBE2Q2LH0YL09 131 aa16.26■□□□□ 0.19
SGCE-203ENST00000425444 ECE2O60344 883 aa16.26■□□□□ 0.19
SGCE-203ENST00000425444 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
SGCE-203ENST00000425444 HSP90B1P14625 803 aaKnown RBP16.26■□□□□ 0.19
SGCE-203ENST00000425444 TM4SF4P48230 202 aa16.26■□□□□ 0.19
SGCE-203ENST00000425444 EXOSC9Q06265 439 aaKnown RBP16.26■□□□□ 0.19
SGCE-203ENST00000425444 MKRN3Q13064 507 aaKnown RBP16.26■□□□□ 0.19
SGCE-203ENST00000425444 DOK7Q18PE1 504 aa16.26■□□□□ 0.19
SGCE-203ENST00000425444 ANGEL2Q5VTE6 544 aaKnown RBP16.26■□□□□ 0.19
SGCE-203ENST00000425444 KSR2Q6VAB6 950 aa16.26■□□□□ 0.19
SGCE-203ENST00000425444 PI4KAP1Q8N8J0 262 aa16.26■□□□□ 0.19
SGCE-203ENST00000425444 ZBTB38Q8NAP3 1195 aaPredicted RBP16.26■□□□□ 0.19
SGCE-203ENST00000425444 CCDC191Q8NCU4 936 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms