RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 USP50Q70EL3 339 aaPredicted RBP27.46■■□□□ 1.99
CDCP1-202ENST00000425231 CDC5LQ99459 802 aaKnown RBP27.46■■□□□ 1.99
CDCP1-202ENST00000425231 DBNDD1Q9H9R9 158 aa27.46■■□□□ 1.99
CDCP1-202ENST00000425231 ANKIB1Q9P2G1 1089 aa27.46■■□□□ 1.99
CDCP1-202ENST00000425231 BEND3Q5T5X7 828 aa27.45■■□□□ 1.98
CDCP1-202ENST00000425231 ADARB2Q9NS39 739 aaKnown RBP27.44■■□□□ 1.98
CDCP1-202ENST00000425231 UFL1O94874 794 aa27.43■■□□□ 1.98
CDCP1-202ENST00000425231 DOK7Q18PE1 504 aa27.43■■□□□ 1.98
CDCP1-202ENST00000425231 ZC3H12CQ9C0D7 883 aaKnown RBP27.43■■□□□ 1.98
CDCP1-202ENST00000425231 BSDC1Q9NW68 430 aaPredicted RBP27.43■■□□□ 1.98
CDCP1-202ENST00000425231 GGA1Q9UJY5 639 aa27.43■■□□□ 1.98
CDCP1-202ENST00000425231 ECE2O60344 883 aa27.42■■□□□ 1.98
CDCP1-202ENST00000425231 CSF1RP07333 972 aa27.42■■□□□ 1.98
CDCP1-202ENST00000425231 KCNQ5Q9NR82 932 aa27.42■■□□□ 1.98
CDCP1-202ENST00000425231 CCER2I3L3R5 266 aa27.41■■□□□ 1.98
CDCP1-202ENST00000425231 BCL2L13Q9BXK5 485 aa27.41■■□□□ 1.98
CDCP1-202ENST00000425231 XDHP47989 1333 aa27.41■■□□□ 1.98
CDCP1-202ENST00000425231 E9PSI1 815 aa27.41■■□□□ 1.98
CDCP1-202ENST00000425231 PSMD14O00487 310 aa27.41■■□□□ 1.98
CDCP1-202ENST00000425231 MINPP1Q9UNW1 487 aa27.41■■□□□ 1.98
CDCP1-202ENST00000425231 SLFN5Q08AF3 891 aa27.4■■□□□ 1.98
CDCP1-202ENST00000425231 ZBTB12Q9Y330 459 aaPredicted RBP27.4■■□□□ 1.98
CDCP1-202ENST00000425231 SPEF2Q9C093 1822 aa27.39■■□□□ 1.98
CDCP1-202ENST00000425231 TMEM88BA6NKF7 163 aa27.39■■□□□ 1.97
CDCP1-202ENST00000425231 CNOT7Q9UIV1 285 aaKnown RBP27.39■■□□□ 1.97
CDCP1-202ENST00000425231 SHTN1A0MZ66 631 aa27.38■■□□□ 1.97
CDCP1-202ENST00000425231 WTIPA6NIX2 430 aaPredicted RBP27.38■■□□□ 1.97
CDCP1-202ENST00000425231 ITGA6P23229 1130 aa27.38■■□□□ 1.97
CDCP1-202ENST00000425231 ATP2B4P23634 1241 aa27.38■■□□□ 1.97
CDCP1-202ENST00000425231 FAM161AQ3B820 660 aa27.38■■□□□ 1.97
CDCP1-202ENST00000425231 DPF2Q92785 391 aa27.38■■□□□ 1.97
CDCP1-202ENST00000425231 SCN9AQ15858 1988 aa27.37■■□□□ 1.97
CDCP1-202ENST00000425231 HIRAP54198 1017 aaPredicted RBP27.37■■□□□ 1.97
CDCP1-202ENST00000425231 FOXO4P98177 505 aa27.36■■□□□ 1.97
CDCP1-202ENST00000425231 CDCA7LQ96GN5 454 aa27.36■■□□□ 1.97
CDCP1-202ENST00000425231 MKRN1Q9UHC7 482 aaKnown RBP27.36■■□□□ 1.97
CDCP1-202ENST00000425231 PGAP2Q9UHJ9 254 aa27.36■■□□□ 1.97
CDCP1-202ENST00000425231 IGHMBP2P38935 993 aaKnown RBP27.35■■□□□ 1.97
CDCP1-202ENST00000425231 FMR1Q06787 632 aaKnown RBP eCLIP27.35■■□□□ 1.97
CDCP1-202ENST00000425231 MICALL2Q8IY33 904 aa27.35■■□□□ 1.97
CDCP1-202ENST00000425231 MRPL50Q8N5N7 158 aaKnown RBP27.35■■□□□ 1.97
CDCP1-202ENST00000425231 VIL1P09327 827 aaKnown RBP27.34■■□□□ 1.97
CDCP1-202ENST00000425231 TRPM4Q8TD43 1214 aa27.34■■□□□ 1.97
CDCP1-202ENST00000425231 G3V3G9 751 aa27.33■■□□□ 1.97
CDCP1-202ENST00000425231 H7C1D1 291 aa27.33■■□□□ 1.97
CDCP1-202ENST00000425231 GRM8O00222 908 aa27.33■■□□□ 1.97
CDCP1-202ENST00000425231 ALDH1L1O75891 902 aa27.33■■□□□ 1.97
CDCP1-202ENST00000425231 RPS12P25398 132 aaKnown RBP27.33■■□□□ 1.97
CDCP1-202ENST00000425231 DCAF8Q5TAQ9 597 aa27.33■■□□□ 1.97
CDCP1-202ENST00000425231 SLC4A10Q6U841 1118 aa27.33■■□□□ 1.97
CDCP1-202ENST00000425231 TRMT2AQ8IZ69 625 aaKnown RBP27.33■■□□□ 1.97
CDCP1-202ENST00000425231 CNTNAP1P78357 1384 aa27.33■■□□□ 1.97
CDCP1-202ENST00000425231 CCT4P50991 539 aaKnown RBP27.33■■□□□ 1.96
CDCP1-202ENST00000425231 ZC3H15Q8WU90 426 aaKnown RBP27.33■■□□□ 1.96
CDCP1-202ENST00000425231 TRAF5O00463 557 aa27.32■■□□□ 1.96
CDCP1-202ENST00000425231 EPHA10Q5JZY3 1008 aa27.32■■□□□ 1.96
CDCP1-202ENST00000425231 SRCIN1Q9C0H9 1055 aa27.32■■□□□ 1.96
CDCP1-202ENST00000425231 SAMD7Q7Z3H4 446 aa27.31■■□□□ 1.96
CDCP1-202ENST00000425231 SSH1Q8WYL5 1049 aa27.31■■□□□ 1.96
CDCP1-202ENST00000425231 MPHOSPH8Q99549 860 aa27.31■■□□□ 1.96
CDCP1-202ENST00000425231 MED23Q9ULK4 1368 aa27.3■■□□□ 1.96
CDCP1-202ENST00000425231 ANKRD18BA2A2Z9 1011 aa27.3■■□□□ 1.96
CDCP1-202ENST00000425231 PODNQ7Z5L7 613 aa27.3■■□□□ 1.96
CDCP1-202ENST00000425231 C9orf78Q9NZ63 289 aaPredicted RBP27.3■■□□□ 1.96
CDCP1-202ENST00000425231 LEMD3Q9Y2U8 911 aa27.3■■□□□ 1.96
CDCP1-202ENST00000425231 PSME4Q14997 1843 aa27.29■■□□□ 1.96
CDCP1-202ENST00000425231 EGFRP00533 1210 aa27.29■■□□□ 1.96
CDCP1-202ENST00000425231 CST9Q5W186 159 aa27.29■■□□□ 1.96
CDCP1-202ENST00000425231 LMBR1LQ6UX01 489 aa27.29■■□□□ 1.96
CDCP1-202ENST00000425231 IFIT5Q13325 482 aaKnown RBP27.28■■□□□ 1.96
CDCP1-202ENST00000425231 ANKRD2Q9GZV1 360 aa27.28■■□□□ 1.96
CDCP1-202ENST00000425231 PTPRCP08575 1304 aa27.28■■□□□ 1.96
CDCP1-202ENST00000425231 TRPM7Q96QT4 1865 aa27.28■■□□□ 1.96
CDCP1-202ENST00000425231 RASSF10A6NK89 507 aa27.27■■□□□ 1.96
CDCP1-202ENST00000425231 TXNRD3Q86VQ6 643 aa27.27■■□□□ 1.96
CDCP1-202ENST00000425231 GLIS2Q9BZE0 524 aaPredicted RBP27.27■■□□□ 1.96
CDCP1-202ENST00000425231 VEGFBP49765 207 aa27.26■■□□□ 1.95
CDCP1-202ENST00000425231 CHRNDQ07001 517 aa27.26■■□□□ 1.95
CDCP1-202ENST00000425231 TBC1D10BQ4KMP7 808 aaPredicted RBP27.26■■□□□ 1.95
CDCP1-202ENST00000425231 RSBN1LQ6PCB5 846 aaPredicted RBP27.26■■□□□ 1.95
CDCP1-202ENST00000425231 CHMP3Q9Y3E7 222 aa27.26■■□□□ 1.95
CDCP1-202ENST00000425231 ZNF609O15014 1411 aa27.26■■□□□ 1.95
CDCP1-202ENST00000425231 ZNF804BA4D1E1 1349 aa27.26■■□□□ 1.95
CDCP1-202ENST00000425231 DEFB115Q30KQ5 88 aa27.25■■□□□ 1.95
CDCP1-202ENST00000425231 AGBL3Q8NEM8 1001 aa27.25■■□□□ 1.95
CDCP1-202ENST00000425231 KAZALD1Q96I82 304 aa27.25■■□□□ 1.95
CDCP1-202ENST00000425231 GMLQ99445 158 aa27.25■■□□□ 1.95
CDCP1-202ENST00000425231 UTYO14607 1347 aa27.25■■□□□ 1.95
CDCP1-202ENST00000425231 USP17L3A6NCW0 530 aa27.24■■□□□ 1.95
CDCP1-202ENST00000425231 USP17L4A6NCW7 530 aa27.24■■□□□ 1.95
CDCP1-202ENST00000425231 NBPF7P0C2Y1 421 aaPredicted RBP27.24■■□□□ 1.95
CDCP1-202ENST00000425231 ALDH1L2Q3SY69 923 aa27.24■■□□□ 1.95
CDCP1-202ENST00000425231 CDC37L1Q7L3B6 337 aa27.24■■□□□ 1.95
CDCP1-202ENST00000425231 USP17L1Q7RTZ2 530 aa27.24■■□□□ 1.95
CDCP1-202ENST00000425231 HSPA1AP0DMV8 641 aaKnown RBP27.24■■□□□ 1.95
CDCP1-202ENST00000425231 HSPA1BP0DMV9 641 aaKnown RBP27.24■■□□□ 1.95
CDCP1-202ENST00000425231 KLRK1P26718 216 aa27.24■■□□□ 1.95
CDCP1-202ENST00000425231 RBM26Q5T8P6 1007 aaKnown RBP27.24■■□□□ 1.95
CDCP1-202ENST00000425231 SUCLG2Q96I99 432 aa27.24■■□□□ 1.95
CDCP1-202ENST00000425231 COA1Q9GZY4 146 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms