RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 ANKRD18BA2A2Z9 1011 aa28.16■■■□□ 2.1
PTCHD3P2-201ENST00000424937 POTECB2RU33 542 aa28.16■■■□□ 2.1
PTCHD3P2-201ENST00000424937 GGA1Q9UJY5 639 aa28.16■■■□□ 2.1
PTCHD3P2-201ENST00000424937 GJA3Q9Y6H8 435 aa28.16■■■□□ 2.1
PTCHD3P2-201ENST00000424937 RIMBP2O15034 1052 aa28.15■■■□□ 2.1
PTCHD3P2-201ENST00000424937 CCT4P50991 539 aaKnown RBP28.15■■■□□ 2.1
PTCHD3P2-201ENST00000424937 IFIT5Q13325 482 aaKnown RBP28.15■■■□□ 2.1
PTCHD3P2-201ENST00000424937 GPC2Q8N158 579 aa28.15■■■□□ 2.1
PTCHD3P2-201ENST00000424937 L3MBTL3Q96JM7 780 aaPredicted RBP28.15■■■□□ 2.1
PTCHD3P2-201ENST00000424937 EYA3Q99504 573 aa28.15■■■□□ 2.1
PTCHD3P2-201ENST00000424937 ZNRF3Q9ULT6 936 aa28.15■■■□□ 2.1
PTCHD3P2-201ENST00000424937 BCAR3O75815 825 aa28.14■■■□□ 2.1
PTCHD3P2-201ENST00000424937 MPHOSPH8Q99549 860 aa28.14■■■□□ 2.1
PTCHD3P2-201ENST00000424937 MINPP1Q9UNW1 487 aa28.14■■■□□ 2.1
PTCHD3P2-201ENST00000424937 SCN9AQ15858 1988 aa28.12■■■□□ 2.09
PTCHD3P2-201ENST00000424937 IQCA1LA6NCM1 817 aa28.12■■■□□ 2.09
PTCHD3P2-201ENST00000424937 RBM46Q8TBY0 533 aaKnown RBP28.12■■■□□ 2.09
PTCHD3P2-201ENST00000424937 FRAT1Q92837 279 aaPredicted RBP28.12■■■□□ 2.09
PTCHD3P2-201ENST00000424937 KAZALD1Q96I82 304 aa28.12■■■□□ 2.09
PTCHD3P2-201ENST00000424937 USP44Q9H0E7 712 aa28.12■■■□□ 2.09
PTCHD3P2-201ENST00000424937 PSME4Q14997 1843 aa28.11■■■□□ 2.09
PTCHD3P2-201ENST00000424937 CCDC57Q2TAC2 916 aa28.11■■■□□ 2.09
PTCHD3P2-201ENST00000424937 ARHGAP45Q92619 1136 aa28.11■■■□□ 2.09
PTCHD3P2-201ENST00000424937 BICC1Q9H694 974 aaKnown RBP28.11■■■□□ 2.09
PTCHD3P2-201ENST00000424937 DBNDD1Q9H9R9 158 aa28.11■■■□□ 2.09
PTCHD3P2-201ENST00000424937 ATP2B4P23634 1241 aa28.1■■■□□ 2.09
PTCHD3P2-201ENST00000424937 TAF7LQ5H9L4 462 aa28.1■■■□□ 2.09
PTCHD3P2-201ENST00000424937 ZC3H12CQ9C0D7 883 aaKnown RBP28.1■■■□□ 2.09
PTCHD3P2-201ENST00000424937 IPO8O15397 1037 aaKnown RBP28.09■■■□□ 2.09
PTCHD3P2-201ENST00000424937 CXCL9Q07325 125 aa28.09■■■□□ 2.09
PTCHD3P2-201ENST00000424937 HACL1Q9UJ83 578 aa28.09■■■□□ 2.09
PTCHD3P2-201ENST00000424937 YDJCA8MPS7 323 aa28.08■■■□□ 2.09
PTCHD3P2-201ENST00000424937 ECE2O60344 883 aa28.08■■■□□ 2.09
PTCHD3P2-201ENST00000424937 RAD17O75943 681 aa28.08■■■□□ 2.09
PTCHD3P2-201ENST00000424937 DOK7Q18PE1 504 aa28.08■■■□□ 2.09
PTCHD3P2-201ENST00000424937 ZNF594Q96JF6 807 aaPredicted RBP28.08■■■□□ 2.09
PTCHD3P2-201ENST00000424937 TRIM27P14373 513 aa28.07■■■□□ 2.08
PTCHD3P2-201ENST00000424937 CIAPIN1Q6FI81 312 aa28.07■■■□□ 2.08
PTCHD3P2-201ENST00000424937 ANKRD44Q8N8A2 993 aa28.07■■■□□ 2.08
PTCHD3P2-201ENST00000424937 G3V3G9 751 aa28.06■■■□□ 2.08
PTCHD3P2-201ENST00000424937 CHRNDQ07001 517 aa28.06■■■□□ 2.08
PTCHD3P2-201ENST00000424937 RABL6Q3YEC7 729 aaPredicted RBP28.06■■■□□ 2.08
PTCHD3P2-201ENST00000424937 DCAF8Q5TAQ9 597 aa28.06■■■□□ 2.08
PTCHD3P2-201ENST00000424937 ATF7IPQ6VMQ6 1270 aa28.06■■■□□ 2.08
PTCHD3P2-201ENST00000424937 ANKRD2Q9GZV1 360 aa28.06■■■□□ 2.08
PTCHD3P2-201ENST00000424937 TAF1DQ9H5J8 278 aaPredicted RBP28.06■■■□□ 2.08
PTCHD3P2-201ENST00000424937 TNNQ9UQP3 1299 aa28.06■■■□□ 2.08
PTCHD3P2-201ENST00000424937 UBTFL1P0CB47 393 aaPredicted RBP28.05■■■□□ 2.08
PTCHD3P2-201ENST00000424937 LMOD1P29536 600 aaPredicted RBP28.05■■■□□ 2.08
PTCHD3P2-201ENST00000424937 SMC1BQ8NDV3 1235 aa28.05■■■□□ 2.08
PTCHD3P2-201ENST00000424937 MED23Q9ULK4 1368 aa28.05■■■□□ 2.08
PTCHD3P2-201ENST00000424937 ADAMTSL1Q8N6G6 1762 aa28.04■■■□□ 2.08
PTCHD3P2-201ENST00000424937 WTIPA6NIX2 430 aaPredicted RBP28.04■■■□□ 2.08
PTCHD3P2-201ENST00000424937 EPHX2P34913 555 aa28.04■■■□□ 2.08
PTCHD3P2-201ENST00000424937 SCNN1DP51172 638 aa28.04■■■□□ 2.08
PTCHD3P2-201ENST00000424937 FSTL1Q12841 308 aa28.03■■■□□ 2.08
PTCHD3P2-201ENST00000424937 TNIP1Q15025 636 aa28.03■■■□□ 2.08
PTCHD3P2-201ENST00000424937 ZKSCAN2Q63HK3 967 aa28.03■■■□□ 2.08
PTCHD3P2-201ENST00000424937 INTS3Q68E01 1043 aaKnown RBP28.03■■■□□ 2.08
PTCHD3P2-201ENST00000424937 LDHAL6AQ6ZMR3 332 aa28.03■■■□□ 2.08
PTCHD3P2-201ENST00000424937 CLUAP1Q96AJ1 413 aa28.03■■■□□ 2.08
PTCHD3P2-201ENST00000424937 CNNM1Q9NRU3 951 aa28.03■■■□□ 2.08
PTCHD3P2-201ENST00000424937 LEMD3Q9Y2U8 911 aa28.03■■■□□ 2.08
PTCHD3P2-201ENST00000424937 ZNF804BA4D1E1 1349 aa28.02■■■□□ 2.08
PTCHD3P2-201ENST00000424937 POTEIP0CG38 1075 aa28.02■■■□□ 2.08
PTCHD3P2-201ENST00000424937 POTEJP0CG39 1038 aa28.02■■■□□ 2.08
PTCHD3P2-201ENST00000424937 KCNJ4P48050 445 aa28.02■■■□□ 2.08
PTCHD3P2-201ENST00000424937 EAPPQ56P03 285 aaPredicted RBP28.02■■■□□ 2.08
PTCHD3P2-201ENST00000424937 GMPSP49915 693 aaPredicted RBP28.01■■■□□ 2.07
PTCHD3P2-201ENST00000424937 HELBQ8NG08 1087 aaPredicted RBP28.01■■■□□ 2.07
PTCHD3P2-201ENST00000424937 MEIS3Q99687 375 aa28.01■■■□□ 2.07
PTCHD3P2-201ENST00000424937 ZNF646O15015 1829 aaPredicted RBP28.01■■■□□ 2.07
PTCHD3P2-201ENST00000424937 PSMD14O00487 310 aa28■■■□□ 2.07
PTCHD3P2-201ENST00000424937 TAF5LO75529 589 aa28■■■□□ 2.07
PTCHD3P2-201ENST00000424937 HSPA6P17066 643 aa28■■■□□ 2.07
PTCHD3P2-201ENST00000424937 KCNQ5Q9NR82 932 aa28■■■□□ 2.07
PTCHD3P2-201ENST00000424937 EPS15P42566 896 aa27.99■■■□□ 2.07
PTCHD3P2-201ENST00000424937 KLRK1P26718 216 aa27.98■■■□□ 2.07
PTCHD3P2-201ENST00000424937 LDHDQ86WU2 507 aa27.98■■■□□ 2.07
PTCHD3P2-201ENST00000424937 PUS3Q9BZE2 481 aaKnown RBP27.98■■■□□ 2.07
PTCHD3P2-201ENST00000424937 GPRC5DQ9NZD1 345 aa27.98■■■□□ 2.07
PTCHD3P2-201ENST00000424937 LRRFIP2Q9Y608 721 aaKnown RBP27.98■■■□□ 2.07
PTCHD3P2-201ENST00000424937 PLIN1O60240 522 aa27.97■■■□□ 2.07
PTCHD3P2-201ENST00000424937 CHADLQ6NUI6 762 aa27.97■■■□□ 2.07
PTCHD3P2-201ENST00000424937 PNMA8AQ86V59 439 aaPredicted RBP27.97■■■□□ 2.07
PTCHD3P2-201ENST00000424937 TXNRD3Q86VQ6 643 aa27.97■■■□□ 2.07
PTCHD3P2-201ENST00000424937 SNAP23O00161 211 aa27.96■■■□□ 2.07
PTCHD3P2-201ENST00000424937 HDAC5Q9UQL6 1122 aa27.96■■■□□ 2.07
PTCHD3P2-201ENST00000424937 ZBTB12Q9Y330 459 aaPredicted RBP27.96■■■□□ 2.07
PTCHD3P2-201ENST00000424937 FTSJ3Q8IY81 847 aaKnown RBP27.95■■■□□ 2.06
PTCHD3P2-201ENST00000424937 TMEM57Q8N5G2 664 aa27.95■■■□□ 2.06
PTCHD3P2-201ENST00000424937 KLHDC4Q8TBB5 520 aa27.95■■■□□ 2.06
PTCHD3P2-201ENST00000424937 CLEC11AQ9Y240 323 aa27.95■■■□□ 2.06
PTCHD3P2-201ENST00000424937 GNAI3P08754 354 aa27.94■■■□□ 2.06
PTCHD3P2-201ENST00000424937 ADARB2Q9NS39 739 aaKnown RBP27.94■■■□□ 2.06
PTCHD3P2-201ENST00000424937 LRRC24Q50LG9 513 aa27.93■■■□□ 2.06
PTCHD3P2-201ENST00000424937 PODNQ7Z5L7 613 aa27.93■■■□□ 2.06
PTCHD3P2-201ENST00000424937 COA1Q9GZY4 146 aa27.93■■■□□ 2.06
PTCHD3P2-201ENST00000424937 RIPOR2Q9Y4F9 1068 aa27.92■■■□□ 2.06
PTCHD3P2-201ENST00000424937 MROH5Q6ZUA9 1318 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms