RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
HDLBP-209ENST00000422933 ATP6V0A2Q9Y487 856 aa12.36□□□□□ -0.43
HDLBP-209ENST00000422933 COL11A2P13942 1736 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-209ENST00000422933 MROH5Q6ZUA9 1318 aa12.36□□□□□ -0.43
HDLBP-209ENST00000422933 SURF6O75683 361 aaKnown RBP12.35□□□□□ -0.43
HDLBP-209ENST00000422933 KCNA3P22001 575 aa12.35□□□□□ -0.43
HDLBP-209ENST00000422933 IL15P40933 162 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-209ENST00000422933 SSH3Q8TE77 659 aa12.35□□□□□ -0.43
HDLBP-209ENST00000422933 COPRSQ9NQ92 184 aa12.35□□□□□ -0.43
HDLBP-209ENST00000422933 SPEF2Q9C093 1822 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 TAF1P21675 1872 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 PNMA6EA0A0J9YXQ4 647 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 G3V3G9 751 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 EYA2O00167 538 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 C21orf2O43822 256 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 CIAO1O76071 339 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 METTL24Q5JXM2 366 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 DPP8Q6V1X1 898 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-209ENST00000422933 MPNDQ8N594 471 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 ZNF594Q96JF6 807 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-209ENST00000422933 EYA3Q99504 573 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 SIL1Q9H173 461 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 CEP126Q9P2H0 1117 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 NSFL1CQ9UNZ2 370 aaKnown RBP12.34□□□□□ -0.43
HDLBP-209ENST00000422933 SLX4Q8IY92 1834 aa12.34□□□□□ -0.43
HDLBP-209ENST00000422933 ARFGEF1Q9Y6D6 1849 aa12.33□□□□□ -0.44
HDLBP-209ENST00000422933 RAB11FIP3O75154 756 aa12.33□□□□□ -0.44
HDLBP-209ENST00000422933 PTPN12Q05209 780 aaKnown RBP12.33□□□□□ -0.44
HDLBP-209ENST00000422933 POLA2Q14181 598 aa12.33□□□□□ -0.44
HDLBP-209ENST00000422933 AKAP2Q9Y2D5 859 aa12.33□□□□□ -0.44
HDLBP-209ENST00000422933 XDHP47989 1333 aa12.33□□□□□ -0.44
HDLBP-209ENST00000422933 C6orf229H3BNL8 230 aa12.32□□□□□ -0.44
HDLBP-209ENST00000422933 ATP2B4P23634 1241 aa12.32□□□□□ -0.44
HDLBP-209ENST00000422933 ARHGAP27Q6ZUM4 889 aa12.32□□□□□ -0.44
HDLBP-209ENST00000422933 ZNF526Q8TF50 670 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-209ENST00000422933 GGA1Q9UJY5 639 aa12.32□□□□□ -0.44
HDLBP-209ENST00000422933 MINPP1Q9UNW1 487 aa12.32□□□□□ -0.44
HDLBP-209ENST00000422933 LEMD3Q9Y2U8 911 aa12.32□□□□□ -0.44
HDLBP-209ENST00000422933 RFX5P48382 616 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-209ENST00000422933 CHRNDQ07001 517 aa12.31□□□□□ -0.44
HDLBP-209ENST00000422933 HDAC1Q13547 482 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-209ENST00000422933 KLHDC4Q8TBB5 520 aa12.31□□□□□ -0.44
HDLBP-209ENST00000422933 GCC1Q96CN9 775 aa12.31□□□□□ -0.44
HDLBP-209ENST00000422933 PA2G4Q9UQ80 394 aaKnown RBP12.31□□□□□ -0.44
HDLBP-209ENST00000422933 PCDHB15Q9Y5E8 787 aa12.31□□□□□ -0.44
HDLBP-209ENST00000422933 UFL1O94874 794 aa12.3□□□□□ -0.44
HDLBP-209ENST00000422933 IFIT1P09914 478 aaKnown RBP12.3□□□□□ -0.44
HDLBP-209ENST00000422933 KIF1BPQ96EK5 621 aa12.3□□□□□ -0.44
HDLBP-209ENST00000422933 CCDC136Q96JN2 1154 aa12.3□□□□□ -0.44
HDLBP-209ENST00000422933 ZC3H12CQ9C0D7 883 aaKnown RBP12.3□□□□□ -0.44
HDLBP-209ENST00000422933 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
HDLBP-209ENST00000422933 TAOK3Q9H2K8 898 aa12.3□□□□□ -0.44
HDLBP-209ENST00000422933 PODXL2Q9NZ53 605 aa12.3□□□□□ -0.44
HDLBP-209ENST00000422933 NOP58Q9Y2X3 529 aaKnown RBP12.3□□□□□ -0.44
HDLBP-209ENST00000422933 RIPOR2Q9Y4F9 1068 aa12.3□□□□□ -0.44
HDLBP-209ENST00000422933 KIF3CO14782 793 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 PDE8BO95263 885 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 SLC5A1P13866 664 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 GPSM2P81274 684 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 FKBP4Q02790 459 aaKnown RBP eCLIP12.29□□□□□ -0.44
HDLBP-209ENST00000422933 UBE4AQ14139 1066 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 PUM3Q15397 648 aaKnown RBP12.29□□□□□ -0.44
HDLBP-209ENST00000422933 LRRC24Q50LG9 513 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 CAVIN4Q5BKX8 364 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 GORABQ5T7V8 394 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 VPS37DQ86XT2 251 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 CLASRPQ8N2M8 674 aaKnown RBP12.29□□□□□ -0.44
HDLBP-209ENST00000422933 C7orf43Q8WVR3 580 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 PSMD1Q99460 953 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 PUS3Q9BZE2 481 aaKnown RBP12.29□□□□□ -0.44
HDLBP-209ENST00000422933 LRRCC1Q9C099 1032 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 DCTPP1Q9H773 170 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 GPBP1L1Q9HC44 474 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-209ENST00000422933 EXOC6BQ9Y2D4 811 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 ZNF804BA4D1E1 1349 aa12.29□□□□□ -0.44
HDLBP-209ENST00000422933 APBB1O00213 710 aa12.28□□□□□ -0.44
HDLBP-209ENST00000422933 HSPA6P17066 643 aa12.28□□□□□ -0.44
HDLBP-209ENST00000422933 WASHC4Q2M389 1173 aa12.28□□□□□ -0.44
HDLBP-209ENST00000422933 HELBQ8NG08 1087 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-209ENST00000422933 JDP2Q8WYK2 163 aa12.28□□□□□ -0.44
HDLBP-209ENST00000422933 LPIN2Q92539 896 aa12.28□□□□□ -0.44
HDLBP-209ENST00000422933 NEUROD6Q96NK8 337 aa12.28□□□□□ -0.44
HDLBP-209ENST00000422933 PPP4R2Q9NY27 417 aa12.28□□□□□ -0.44
HDLBP-209ENST00000422933 TAF5LO75529 589 aa12.27□□□□□ -0.45
HDLBP-209ENST00000422933 TFCP2Q12800 502 aa12.27□□□□□ -0.45
HDLBP-209ENST00000422933 ATP2B3Q16720 1220 aa12.27□□□□□ -0.45
HDLBP-209ENST00000422933 ATG9AQ7Z3C6 839 aa12.27□□□□□ -0.45
HDLBP-209ENST00000422933 ZNF804AQ7Z570 1209 aa12.27□□□□□ -0.45
HDLBP-209ENST00000422933 SIRT2Q8IXJ6 389 aa12.27□□□□□ -0.45
HDLBP-209ENST00000422933 LARGE2Q8N3Y3 721 aa12.27□□□□□ -0.45
HDLBP-209ENST00000422933 TBC1D16Q8TBP0 767 aa12.27□□□□□ -0.45
HDLBP-209ENST00000422933 BCL11AQ9H165 835 aa12.27□□□□□ -0.45
HDLBP-209ENST00000422933 GPR108Q9NPR9 543 aa12.27□□□□□ -0.45
HDLBP-209ENST00000422933 GNL3LQ9NVN8 582 aaKnown RBP12.27□□□□□ -0.45
HDLBP-209ENST00000422933 LRRC37AA6NMS7 1700 aa12.27□□□□□ -0.45
HDLBP-209ENST00000422933 LTBP3Q9NS15 1303 aa12.27□□□□□ -0.45
HDLBP-209ENST00000422933 SBF1O95248 1867 aa12.26□□□□□ -0.45
HDLBP-209ENST00000422933 FER1L6Q2WGJ9 1857 aa12.26□□□□□ -0.45
HDLBP-209ENST00000422933 PPIP5K2O43314 1243 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms