RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ECE2O60344 883 aa11.85□□□□□ -0.51
NUP50-206ENST00000422489 UFL1O94874 794 aa11.85□□□□□ -0.51
NUP50-206ENST00000422489 CTSWP56202 376 aa11.85□□□□□ -0.51
NUP50-206ENST00000422489 FMR1Q06787 632 aaKnown RBP eCLIP11.85□□□□□ -0.51
NUP50-206ENST00000422489 GCKRQ14397 625 aa11.85□□□□□ -0.51
NUP50-206ENST00000422489 RBM26Q5T8P6 1007 aaKnown RBP11.85□□□□□ -0.51
NUP50-206ENST00000422489 TTLL11Q8NHH1 800 aa11.85□□□□□ -0.51
NUP50-206ENST00000422489 KCNQ5Q9NR82 932 aa11.85□□□□□ -0.51
NUP50-206ENST00000422489 DICER1Q9UPY3 1922 aaKnown RBP11.84□□□□□ -0.51
NUP50-206ENST00000422489 F6X3S4 739 aa11.84□□□□□ -0.51
NUP50-206ENST00000422489 PSMD14O00487 310 aa11.84□□□□□ -0.51
NUP50-206ENST00000422489 CDC5LQ99459 802 aaKnown RBP11.84□□□□□ -0.51
NUP50-206ENST00000422489 GREM2Q9H772 168 aa11.84□□□□□ -0.51
NUP50-206ENST00000422489 ABT1Q9ULW3 272 aaKnown RBP11.84□□□□□ -0.51
NUP50-206ENST00000422489 SHTN1A0MZ66 631 aa11.83□□□□□ -0.52
NUP50-206ENST00000422489 TRAF5O00463 557 aa11.83□□□□□ -0.52
NUP50-206ENST00000422489 HSPA1AP0DMV8 641 aaKnown RBP11.83□□□□□ -0.52
NUP50-206ENST00000422489 HSPA1BP0DMV9 641 aaKnown RBP11.83□□□□□ -0.52
NUP50-206ENST00000422489 ATP2B4P23634 1241 aa11.83□□□□□ -0.52
NUP50-206ENST00000422489 DEFB115Q30KQ5 88 aa11.83□□□□□ -0.52
NUP50-206ENST00000422489 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
NUP50-206ENST00000422489 PODXL2Q9NZ53 605 aa11.83□□□□□ -0.52
NUP50-206ENST00000422489 CEP350Q5VT06 3117 aa11.82□□□□□ -0.52
NUP50-206ENST00000422489 ANKRD36CQ5JPF3 1778 aa11.82□□□□□ -0.52
NUP50-206ENST00000422489 IGHMBP2P38935 993 aaKnown RBP11.82□□□□□ -0.52
NUP50-206ENST00000422489 VEGFBP49765 207 aa11.82□□□□□ -0.52
NUP50-206ENST00000422489 HIRAP54198 1017 aaPredicted RBP11.82□□□□□ -0.52
NUP50-206ENST00000422489 GRM1Q13255 1194 aa11.82□□□□□ -0.52
NUP50-206ENST00000422489 TBC1D10BQ4KMP7 808 aaPredicted RBP11.82□□□□□ -0.52
NUP50-206ENST00000422489 IFFO2Q5TF58 517 aa11.82□□□□□ -0.52
NUP50-206ENST00000422489 SLC4A10Q6U841 1118 aa11.82□□□□□ -0.52
NUP50-206ENST00000422489 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
NUP50-206ENST00000422489 SAMD7Q7Z3H4 446 aa11.82□□□□□ -0.52
NUP50-206ENST00000422489 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
NUP50-206ENST00000422489 MINPP1Q9UNW1 487 aa11.82□□□□□ -0.52
NUP50-206ENST00000422489 CHMP3Q9Y3E7 222 aa11.82□□□□□ -0.52
NUP50-206ENST00000422489 XDHP47989 1333 aa11.82□□□□□ -0.52
NUP50-206ENST00000422489 WTIPA6NIX2 430 aaPredicted RBP11.81□□□□□ -0.52
NUP50-206ENST00000422489 TRPM4Q8TD43 1214 aa11.81□□□□□ -0.52
NUP50-206ENST00000422489 DPF2Q92785 391 aa11.81□□□□□ -0.52
NUP50-206ENST00000422489 MPHOSPH8Q99549 860 aa11.81□□□□□ -0.52
NUP50-206ENST00000422489 GLIS2Q9BZE0 524 aaPredicted RBP11.81□□□□□ -0.52
NUP50-206ENST00000422489 ZNF408Q9H9D4 720 aa11.81□□□□□ -0.52
NUP50-206ENST00000422489 BSDC1Q9NW68 430 aaPredicted RBP11.81□□□□□ -0.52
NUP50-206ENST00000422489 ITGA6P23229 1130 aa11.8□□□□□ -0.52
NUP50-206ENST00000422489 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
NUP50-206ENST00000422489 COL13A1Q5TAT6 717 aaPredicted RBP11.8□□□□□ -0.52
NUP50-206ENST00000422489 CDC37L1Q7L3B6 337 aa11.8□□□□□ -0.52
NUP50-206ENST00000422489 USP48Q86UV5 1035 aa11.8□□□□□ -0.52
NUP50-206ENST00000422489 FBXW7Q969H0 707 aa11.8□□□□□ -0.52
NUP50-206ENST00000422489 C9orf78Q9NZ63 289 aaPredicted RBP11.8□□□□□ -0.52
NUP50-206ENST00000422489 CNTNAP1P78357 1384 aa11.79□□□□□ -0.52
NUP50-206ENST00000422489 SCN4AP35499 1836 aa11.79□□□□□ -0.52
NUP50-206ENST00000422489 ANKRD18BA2A2Z9 1011 aa11.79□□□□□ -0.52
NUP50-206ENST00000422489 CELF2O95319 508 aaKnown RBP11.79□□□□□ -0.52
NUP50-206ENST00000422489 CSF1RP07333 972 aa11.79□□□□□ -0.52
NUP50-206ENST00000422489 VIL1P09327 827 aaKnown RBP11.79□□□□□ -0.52
NUP50-206ENST00000422489 RPS12P25398 132 aaKnown RBP11.79□□□□□ -0.52
NUP50-206ENST00000422489 CCT4P50991 539 aaKnown RBP11.79□□□□□ -0.52
NUP50-206ENST00000422489 CASP7P55210 303 aa11.79□□□□□ -0.52
NUP50-206ENST00000422489 FAM161AQ3B820 660 aa11.79□□□□□ -0.52
NUP50-206ENST00000422489 CST9Q5W186 159 aa11.79□□□□□ -0.52
NUP50-206ENST00000422489 ZC3H15Q8WU90 426 aaKnown RBP11.79□□□□□ -0.52
NUP50-206ENST00000422489 PLA2G12BQ9BX93 195 aa11.79□□□□□ -0.52
NUP50-206ENST00000422489 ANKRD2Q9GZV1 360 aa11.79□□□□□ -0.52
NUP50-206ENST00000422489 PGAP2Q9UHJ9 254 aa11.79□□□□□ -0.52
NUP50-206ENST00000422489 DDX60Q8IY21 1712 aaKnown RBP11.79□□□□□ -0.52
NUP50-206ENST00000422489 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
NUP50-206ENST00000422489 COL4A1P02462 1669 aa11.78□□□□□ -0.52
NUP50-206ENST00000422489 LAMB2P55268 1798 aa11.78□□□□□ -0.52
NUP50-206ENST00000422489 KCNJ4P48050 445 aa11.78□□□□□ -0.52
NUP50-206ENST00000422489 IFIT5Q13325 482 aaKnown RBP11.78□□□□□ -0.52
NUP50-206ENST00000422489 RSBN1LQ6PCB5 846 aaPredicted RBP11.78□□□□□ -0.52
NUP50-206ENST00000422489 DLK2Q6UY11 383 aa11.78□□□□□ -0.52
NUP50-206ENST00000422489 PODNQ7Z5L7 613 aa11.78□□□□□ -0.52
NUP50-206ENST00000422489 AIDAQ96BJ3 306 aa11.78□□□□□ -0.52
NUP50-206ENST00000422489 SRCIN1Q9C0H9 1055 aa11.78□□□□□ -0.52
NUP50-206ENST00000422489 LEMD3Q9Y2U8 911 aa11.78□□□□□ -0.52
NUP50-206ENST00000422489 WDR33Q9C0J8 1336 aaKnown RBP11.78□□□□□ -0.52
NUP50-206ENST00000422489 TAF1P21675 1872 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 DUOX1Q9NRD9 1551 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 USP17L3A6NCW0 530 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 USP17L4A6NCW7 530 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 RASSF10A6NK89 507 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 E9PSI1 815 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 PLIN1O60240 522 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 EGFRP00533 1210 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 FOXO4P98177 505 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 TAF7LQ5H9L4 462 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 CYP4F22Q6NT55 531 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 LMBR1LQ6UX01 489 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 USP17L1Q7RTZ2 530 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 HELBQ8NG08 1087 aaPredicted RBP11.77□□□□□ -0.53
NUP50-206ENST00000422489 DCPSQ96C86 337 aaKnown RBP11.77□□□□□ -0.53
NUP50-206ENST00000422489 ZNF804BA4D1E1 1349 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 ZNF521Q96K83 1311 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 LTBP1Q14766 1721 aa11.77□□□□□ -0.53
NUP50-206ENST00000422489 GRM8O00222 908 aa11.76□□□□□ -0.53
NUP50-206ENST00000422489 TAF5LO75529 589 aa11.76□□□□□ -0.53
NUP50-206ENST00000422489 SLFN5Q08AF3 891 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms