RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 H0YIN7 160 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 PCCAP05165 728 aaPredicted RBP11.49□□□□□ -0.57
CMSS1-201ENST00000421999 HAND2P61296 217 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 CCDC96Q2M329 555 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 GLIPR1L2Q4G1C9 344 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 VEZTQ9HBM0 779 aa11.49□□□□□ -0.57
CMSS1-201ENST00000421999 NBPF26B4DH59 902 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 CYP7A1P22680 504 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 HLFQ16534 295 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 NBPF10Q6P3W6 841 aaKnown RBP11.48□□□□□ -0.57
CMSS1-201ENST00000421999 ZNF804AQ7Z570 1209 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 EYA3Q99504 573 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 PDRG1Q9NUG6 133 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 NDUFB9Q9Y6M9 179 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 TTC41PQ6P2S7 1318 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 PDE4CQ08493 712 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 SDF4Q9BRK5 362 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 SRP68Q9UHB9 627 aaKnown RBP11.48□□□□□ -0.57
CMSS1-201ENST00000421999 IGKV5-2P06315 115 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 HLA-DOAP06340 250 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 PAG1Q9NWQ8 432 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 GJA3Q9Y6H8 435 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 KIF20BQ96Q89 1820 aa11.48□□□□□ -0.57
CMSS1-201ENST00000421999 OVOS2A0A0G2JMS6 1433 aa11.47□□□□□ -0.57
CMSS1-201ENST00000421999 SEC24BO95487 1268 aa11.47□□□□□ -0.57
CMSS1-201ENST00000421999 CTSWP56202 376 aa11.47□□□□□ -0.57
CMSS1-201ENST00000421999 SIRT2Q8IXJ6 389 aa11.47□□□□□ -0.57
CMSS1-201ENST00000421999 HOOK1Q9UJC3 728 aaKnown RBP11.47□□□□□ -0.57
CMSS1-201ENST00000421999 MEGF6O75095 1541 aa11.47□□□□□ -0.57
CMSS1-201ENST00000421999 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
CMSS1-201ENST00000421999 SMIM5Q71RC9 77 aa11.47□□□□□ -0.57
CMSS1-201ENST00000421999 IQSEC2Q5JU85 1478 aa11.47□□□□□ -0.57
CMSS1-201ENST00000421999 K7ELQ4 463 aaPredicted RBP11.47□□□□□ -0.57
CMSS1-201ENST00000421999 SLC9C2Q5TAH2 1124 aa11.47□□□□□ -0.57
CMSS1-201ENST00000421999 NAA16Q6N069 864 aaPredicted RBP11.47□□□□□ -0.57
CMSS1-201ENST00000421999 RBM17Q96I25 401 aaKnown RBP11.47□□□□□ -0.57
CMSS1-201ENST00000421999 LARP6Q9BRS8 491 aaKnown RBP11.47□□□□□ -0.57
CMSS1-201ENST00000421999 CABP5Q9NP86 173 aa11.47□□□□□ -0.57
CMSS1-201ENST00000421999 UFL1O94874 794 aa11.46□□□□□ -0.57
CMSS1-201ENST00000421999 MSNP26038 577 aaKnown RBP11.46□□□□□ -0.57
CMSS1-201ENST00000421999 PICALMQ13492 652 aa11.46□□□□□ -0.57
CMSS1-201ENST00000421999 NLRP10Q86W26 655 aa11.46□□□□□ -0.57
CMSS1-201ENST00000421999 DDX11Q96FC9 970 aa11.46□□□□□ -0.57
CMSS1-201ENST00000421999 ESYT1Q9BSJ8 1104 aa11.46□□□□□ -0.57
CMSS1-201ENST00000421999 GREM2Q9H772 168 aa11.46□□□□□ -0.57
CMSS1-201ENST00000421999 CEMIPQ8WUJ3 1361 aa11.46□□□□□ -0.57
CMSS1-201ENST00000421999 TSPY2A6NKD2 308 aa11.46□□□□□ -0.57
CMSS1-201ENST00000421999 LRRC24Q50LG9 513 aa11.46□□□□□ -0.57
CMSS1-201ENST00000421999 NOC3LQ8WTT2 800 aaKnown RBP11.46□□□□□ -0.57
CMSS1-201ENST00000421999 CDK5RAP3Q96JB5 506 aa11.46□□□□□ -0.57
CMSS1-201ENST00000421999 RNF41Q9H4P4 317 aaPredicted RBP11.46□□□□□ -0.57
CMSS1-201ENST00000421999 STX8Q9UNK0 236 aa11.46□□□□□ -0.57
CMSS1-201ENST00000421999 BCS1LQ9Y276 419 aa11.46□□□□□ -0.57
CMSS1-201ENST00000421999 R3HCC1Q9Y3T6 440 aaKnown RBP11.46□□□□□ -0.57
CMSS1-201ENST00000421999 GPR162Q16538 588 aa11.46□□□□□ -0.58
CMSS1-201ENST00000421999 BARGINQ6ZT62 677 aa11.46□□□□□ -0.58
CMSS1-201ENST00000421999 ZGPATQ8N5A5 531 aaKnown RBP11.46□□□□□ -0.58
CMSS1-201ENST00000421999 CTCFLQ8NI51 663 aaPredicted RBP11.46□□□□□ -0.58
CMSS1-201ENST00000421999 EAF2Q96CJ1 260 aaPredicted RBP11.46□□□□□ -0.58
CMSS1-201ENST00000421999 STK38Q15208 465 aa11.46□□□□□ -0.58
CMSS1-201ENST00000421999 TMEM132AQ24JP5 1023 aa11.46□□□□□ -0.58
CMSS1-201ENST00000421999 XAGE2Q96GT9 111 aa11.46□□□□□ -0.58
CMSS1-201ENST00000421999 IFIT3O14879 490 aaKnown RBP11.45□□□□□ -0.58
CMSS1-201ENST00000421999 FIBPO43427 364 aa11.45□□□□□ -0.58
CMSS1-201ENST00000421999 LARP1BQ659C4 914 aaKnown RBP11.45□□□□□ -0.58
CMSS1-201ENST00000421999 FLAD1Q8NFF5 587 aa11.45□□□□□ -0.58
CMSS1-201ENST00000421999 CRNKL1Q9BZJ0 848 aaKnown RBP11.45□□□□□ -0.58
CMSS1-201ENST00000421999 ANKRD2Q9GZV1 360 aa11.45□□□□□ -0.58
CMSS1-201ENST00000421999 GOLGA6L3A6NEY3 463 aa11.45□□□□□ -0.58
CMSS1-201ENST00000421999 CDKL5O76039 1030 aa11.45□□□□□ -0.58
CMSS1-201ENST00000421999 NMIQ13287 307 aaPredicted RBP11.45□□□□□ -0.58
CMSS1-201ENST00000421999 LARGE2Q8N3Y3 721 aa11.45□□□□□ -0.58
CMSS1-201ENST00000421999 PCMTD1Q96MG8 357 aaPredicted RBP11.45□□□□□ -0.58
CMSS1-201ENST00000421999 PUS3Q9BZE2 481 aaKnown RBP11.45□□□□□ -0.58
CMSS1-201ENST00000421999 ADGRB2O60241 1585 aa11.45□□□□□ -0.58
CMSS1-201ENST00000421999 ZNF76P36508 570 aa11.45□□□□□ -0.58
CMSS1-201ENST00000421999 SYNE4Q8N205 404 aa11.45□□□□□ -0.58
CMSS1-201ENST00000421999 TBC1D32Q96NH3 1257 aa11.45□□□□□ -0.58
CMSS1-201ENST00000421999 TPM2P07951 284 aa11.44□□□□□ -0.58
CMSS1-201ENST00000421999 RPS8P62241 208 aaKnown RBP11.44□□□□□ -0.58
CMSS1-201ENST00000421999 GSTO1P78417 241 aa11.44□□□□□ -0.58
CMSS1-201ENST00000421999 MYCNP04198 464 aaPredicted RBP11.44□□□□□ -0.58
CMSS1-201ENST00000421999 CHMLP26374 656 aa11.44□□□□□ -0.58
CMSS1-201ENST00000421999 CHMP4BP1P59074 171 aa11.44□□□□□ -0.58
CMSS1-201ENST00000421999 PUM3Q15397 648 aaKnown RBP11.44□□□□□ -0.58
CMSS1-201ENST00000421999 EDC3Q96F86 508 aaKnown RBP11.44□□□□□ -0.58
CMSS1-201ENST00000421999 ERVV-1B6SEH8 477 aa11.44□□□□□ -0.58
CMSS1-201ENST00000421999 NKX1-1Q15270 411 aaPredicted RBP11.44□□□□□ -0.58
CMSS1-201ENST00000421999 DPP8Q6V1X1 898 aaPredicted RBP11.44□□□□□ -0.58
CMSS1-201ENST00000421999 KRT18P05783 430 aaKnown RBP11.44□□□□□ -0.58
CMSS1-201ENST00000421999 TXLNAP40222 546 aa11.44□□□□□ -0.58
CMSS1-201ENST00000421999 PDE4BQ07343 736 aa11.44□□□□□ -0.58
CMSS1-201ENST00000421999 TSR1Q2NL82 804 aaKnown RBP11.44□□□□□ -0.58
CMSS1-201ENST00000421999 CEP89Q96ST8 783 aa11.44□□□□□ -0.58
CMSS1-201ENST00000421999 SEC63Q9UGP8 760 aaKnown RBP11.44□□□□□ -0.58
CMSS1-201ENST00000421999 RPS6KA4O75676 772 aa11.43□□□□□ -0.58
CMSS1-201ENST00000421999 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
CMSS1-201ENST00000421999 EPHA10Q5JZY3 1008 aa11.43□□□□□ -0.58
CMSS1-201ENST00000421999 SUSD4Q5VX71 490 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms