RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 BBOX1O75936 387 aa19.49■□□□□ 0.71
DDX55-203ENST00000421670 RWDD1Q9H446 243 aaPredicted RBP19.49■□□□□ 0.71
DDX55-203ENST00000421670 FER1L6Q2WGJ9 1857 aa19.48■□□□□ 0.71
DDX55-203ENST00000421670 APBB1O00213 710 aa19.48■□□□□ 0.71
DDX55-203ENST00000421670 OS9Q13438 667 aaPredicted RBP19.48■□□□□ 0.71
DDX55-203ENST00000421670 RIPOR2Q9Y4F9 1068 aa19.48■□□□□ 0.71
DDX55-203ENST00000421670 ARAP2Q8WZ64 1704 aa19.47■□□□□ 0.71
DDX55-203ENST00000421670 DUOX1Q9NRD9 1551 aa19.47■□□□□ 0.71
DDX55-203ENST00000421670 CIAO1O76071 339 aa19.47■□□□□ 0.71
DDX55-203ENST00000421670 G3BP1Q13283 466 aaKnown RBP eCLIP19.47■□□□□ 0.71
DDX55-203ENST00000421670 DALRD3Q5D0E6 543 aaKnown RBP19.47■□□□□ 0.71
DDX55-203ENST00000421670 B4GALNT3Q6L9W6 998 aa19.47■□□□□ 0.71
DDX55-203ENST00000421670 CCDC136Q96JN2 1154 aa19.47■□□□□ 0.71
DDX55-203ENST00000421670 BCS1LQ9Y276 419 aa19.47■□□□□ 0.71
DDX55-203ENST00000421670 NOP58Q9Y2X3 529 aaKnown RBP19.47■□□□□ 0.71
DDX55-203ENST00000421670 TMC4Q7Z404 712 aa19.46■□□□□ 0.71
DDX55-203ENST00000421670 DCTPP1Q9H773 170 aa19.46■□□□□ 0.71
DDX55-203ENST00000421670 PPP4R2Q9NY27 417 aa19.46■□□□□ 0.71
DDX55-203ENST00000421670 MINPP1Q9UNW1 487 aa19.46■□□□□ 0.71
DDX55-203ENST00000421670 ATP6V0A2Q9Y487 856 aa19.46■□□□□ 0.71
DDX55-203ENST00000421670 GTF3C3Q9Y5Q9 886 aa19.46■□□□□ 0.71
DDX55-203ENST00000421670 C21orf2O43822 256 aa19.45■□□□□ 0.7
DDX55-203ENST00000421670 IL15P40933 162 aaPredicted RBP19.45■□□□□ 0.7
DDX55-203ENST00000421670 CHRNDQ07001 517 aa19.45■□□□□ 0.7
DDX55-203ENST00000421670 HELBQ8NG08 1087 aaPredicted RBP19.45■□□□□ 0.7
DDX55-203ENST00000421670 FBXO3Q9UK99 471 aa19.45■□□□□ 0.7
DDX55-203ENST00000421670 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.45■□□□□ 0.7
DDX55-203ENST00000421670 SNED1Q8TER0 1413 aa19.45■□□□□ 0.7
DDX55-203ENST00000421670 SASH1O94885 1247 aa19.44■□□□□ 0.7
DDX55-203ENST00000421670 METTL24Q5JXM2 366 aa19.44■□□□□ 0.7
DDX55-203ENST00000421670 SP8Q8IXZ3 490 aa19.44■□□□□ 0.7
DDX55-203ENST00000421670 C7orf43Q8WVR3 580 aa19.44■□□□□ 0.7
DDX55-203ENST00000421670 MROH5Q6ZUA9 1318 aa19.44■□□□□ 0.7
DDX55-203ENST00000421670 TAF5LO75529 589 aa19.44■□□□□ 0.7
DDX55-203ENST00000421670 TFCP2Q12800 502 aa19.44■□□□□ 0.7
DDX55-203ENST00000421670 VGLL2Q8N8G2 317 aa19.44■□□□□ 0.7
DDX55-203ENST00000421670 BCL11AQ9H165 835 aa19.44■□□□□ 0.7
DDX55-203ENST00000421670 CCDC88AQ3V6T2 1871 aa19.43■□□□□ 0.7
DDX55-203ENST00000421670 GPSM2P81274 684 aa19.43■□□□□ 0.7
DDX55-203ENST00000421670 HSP90AB4PQ58FF6 505 aa19.43■□□□□ 0.7
DDX55-203ENST00000421670 KDM2BQ8NHM5 1336 aa19.43■□□□□ 0.7
DDX55-203ENST00000421670 SNAP23O00161 211 aa19.42■□□□□ 0.7
DDX55-203ENST00000421670 SMC5Q8IY18 1101 aa19.42■□□□□ 0.7
DDX55-203ENST00000421670 PELP1Q8IZL8 1130 aaKnown RBP19.42■□□□□ 0.7
DDX55-203ENST00000421670 GCC1Q96CN9 775 aa19.42■□□□□ 0.7
DDX55-203ENST00000421670 ANKIB1Q9P2G1 1089 aa19.42■□□□□ 0.7
DDX55-203ENST00000421670 NSFL1CQ9UNZ2 370 aaKnown RBP19.42■□□□□ 0.7
DDX55-203ENST00000421670 WTIPA6NIX2 430 aaPredicted RBP19.41■□□□□ 0.7
DDX55-203ENST00000421670 SMARCA5O60264 1052 aaPredicted RBP19.41■□□□□ 0.7
DDX55-203ENST00000421670 ERC1Q8IUD2 1116 aa19.41■□□□□ 0.7
DDX55-203ENST00000421670 RHPN1Q8TCX5 695 aa19.41■□□□□ 0.7
DDX55-203ENST00000421670 TMX4Q9H1E5 349 aaPredicted RBP19.41■□□□□ 0.7
DDX55-203ENST00000421670 IL1RAPL2Q9NP60 686 aa19.41■□□□□ 0.7
DDX55-203ENST00000421670 XDHP47989 1333 aa19.41■□□□□ 0.7
DDX55-203ENST00000421670 ZNF609O15014 1411 aa19.41■□□□□ 0.7
DDX55-203ENST00000421670 RAB11FIP3O75154 756 aa19.4■□□□□ 0.7
DDX55-203ENST00000421670 PDE8BO95263 885 aa19.4■□□□□ 0.7
DDX55-203ENST00000421670 CCDC93Q567U6 631 aa19.4■□□□□ 0.7
DDX55-203ENST00000421670 KIF1BPQ96EK5 621 aa19.4■□□□□ 0.7
DDX55-203ENST00000421670 ANKRD2Q9GZV1 360 aa19.4■□□□□ 0.7
DDX55-203ENST00000421670 CEP126Q9P2H0 1117 aa19.4■□□□□ 0.7
DDX55-203ENST00000421670 MYH13Q9UKX3 1938 aa19.4■□□□□ 0.7
DDX55-203ENST00000421670 LRRCC1Q9C099 1032 aa19.4■□□□□ 0.7
DDX55-203ENST00000421670 UFL1O94874 794 aa19.39■□□□□ 0.69
DDX55-203ENST00000421670 YBX3P16989 372 aaKnown RBP eCLIP19.39■□□□□ 0.69
DDX55-203ENST00000421670 DPP8Q6V1X1 898 aaPredicted RBP19.39■□□□□ 0.69
DDX55-203ENST00000421670 MPNDQ8N594 471 aa19.39■□□□□ 0.69
DDX55-203ENST00000421670 GPR101Q96P66 508 aaPredicted RBP19.39■□□□□ 0.69
DDX55-203ENST00000421670 ANKRD45Q5TZF3 282 aa19.38■□□□□ 0.69
DDX55-203ENST00000421670 CENPQQ7L2Z9 268 aaPredicted RBP19.38■□□□□ 0.69
DDX55-203ENST00000421670 PODXL2Q9NZ53 605 aa19.38■□□□□ 0.69
DDX55-203ENST00000421670 SBF1O95248 1867 aa19.38■□□□□ 0.69
DDX55-203ENST00000421670 KCNJ4P48050 445 aa19.37■□□□□ 0.69
DDX55-203ENST00000421670 PUM3Q15397 648 aaKnown RBP19.37■□□□□ 0.69
DDX55-203ENST00000421670 ATP2B3Q16720 1220 aa19.37■□□□□ 0.69
DDX55-203ENST00000421670 SOGA3Q5TF21 947 aa19.37■□□□□ 0.69
DDX55-203ENST00000421670 CC2D2BQ6DHV5 1058 aa19.37■□□□□ 0.69
DDX55-203ENST00000421670 POLLQ9UGP5 575 aa19.37■□□□□ 0.69
DDX55-203ENST00000421670 GGA1Q9UJY5 639 aa19.37■□□□□ 0.69
DDX55-203ENST00000421670 ZNF804BA4D1E1 1349 aa19.37■□□□□ 0.69
DDX55-203ENST00000421670 KLRK1P26718 216 aa19.36■□□□□ 0.69
DDX55-203ENST00000421670 TNNI3KQ59H18 835 aa19.36■□□□□ 0.69
DDX55-203ENST00000421670 TBC1D16Q8TBP0 767 aa19.36■□□□□ 0.69
DDX55-203ENST00000421670 FPGT-TNNI3KV9GXZ4 949 aa19.36■□□□□ 0.69
DDX55-203ENST00000421670 A0A1B0GUL7 405 aa19.36■□□□□ 0.69
DDX55-203ENST00000421670 C6orf229H3BNL8 230 aa19.36■□□□□ 0.69
DDX55-203ENST00000421670 FGFR2P21802 821 aa19.36■□□□□ 0.69
DDX55-203ENST00000421670 RTKN2Q8IZC4 609 aa19.36■□□□□ 0.69
DDX55-203ENST00000421670 NFKBIEO00221 500 aa19.35■□□□□ 0.69
DDX55-203ENST00000421670 ATP2B4P23634 1241 aa19.35■□□□□ 0.69
DDX55-203ENST00000421670 TIMM10P62072 90 aa19.35■□□□□ 0.69
DDX55-203ENST00000421670 AACSQ86V21 672 aa19.35■□□□□ 0.69
DDX55-203ENST00000421670 EAF2Q96CJ1 260 aaPredicted RBP19.35■□□□□ 0.69
DDX55-203ENST00000421670 LNPKQ9C0E8 428 aa19.35■□□□□ 0.69
DDX55-203ENST00000421670 TLR7Q9NYK1 1049 aaKnown RBP19.35■□□□□ 0.69
DDX55-203ENST00000421670 AKAP2Q9Y2D5 859 aa19.35■□□□□ 0.69
DDX55-203ENST00000421670 LEMD3Q9Y2U8 911 aa19.35■□□□□ 0.69
DDX55-203ENST00000421670 DICER1Q9UPY3 1922 aaKnown RBP19.35■□□□□ 0.69
DDX55-203ENST00000421670 CHD4Q14839 1912 aa19.34■□□□□ 0.69
DDX55-203ENST00000421670 NUCB1Q02818 461 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms