RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 PEAK1Q9H792 1746 aa19.41■□□□□ 0.7
PKP4-204ENST00000421462 XRN1Q8IZH2 1706 aaKnown RBP19.41■□□□□ 0.7
PKP4-204ENST00000421462 PRAMEF22A3QJZ6 481 aa19.4■□□□□ 0.7
PKP4-204ENST00000421462 PLA2G4AP47712 749 aa19.4■□□□□ 0.7
PKP4-204ENST00000421462 RAB11FIP4Q86YS3 637 aa19.4■□□□□ 0.7
PKP4-204ENST00000421462 BICC1Q9H694 974 aaKnown RBP19.4■□□□□ 0.7
PKP4-204ENST00000421462 ADCY9O60503 1353 aa19.4■□□□□ 0.7
PKP4-204ENST00000421462 DIP2CQ9Y2E4 1556 aa19.4■□□□□ 0.7
PKP4-204ENST00000421462 CAVIN2O95810 425 aa19.4■□□□□ 0.7
PKP4-204ENST00000421462 MPRIPQ6WCQ1 1025 aa19.4■□□□□ 0.7
PKP4-204ENST00000421462 CERS3Q8IU89 383 aa19.4■□□□□ 0.7
PKP4-204ENST00000421462 CARD6Q9BX69 1037 aa19.4■□□□□ 0.7
PKP4-204ENST00000421462 NAT10Q9H0A0 1025 aaKnown RBP19.4■□□□□ 0.7
PKP4-204ENST00000421462 IGSF1Q8N6C5 1336 aa19.4■□□□□ 0.7
PKP4-204ENST00000421462 ST5P78524 1137 aa19.4■□□□□ 0.7
PKP4-204ENST00000421462 HIP1O00291 1037 aa19.39■□□□□ 0.69
PKP4-204ENST00000421462 SUCLG2Q96I99 432 aa19.39■□□□□ 0.69
PKP4-204ENST00000421462 ZSCAN16Q9H4T2 348 aaPredicted RBP19.39■□□□□ 0.69
PKP4-204ENST00000421462 TAF5LO75529 589 aa19.39■□□□□ 0.69
PKP4-204ENST00000421462 CYP2C19P33261 490 aa19.39■□□□□ 0.69
PKP4-204ENST00000421462 GSDMDP57764 484 aa19.39■□□□□ 0.69
PKP4-204ENST00000421462 ERC1Q8IUD2 1116 aa19.39■□□□□ 0.69
PKP4-204ENST00000421462 PTPDC1A2A3K4 754 aa19.38■□□□□ 0.69
PKP4-204ENST00000421462 CTAGE5O15320 804 aa19.38■□□□□ 0.69
PKP4-204ENST00000421462 H2AFXP16104 143 aaPredicted RBP19.38■□□□□ 0.69
PKP4-204ENST00000421462 FAM160A1Q05DH4 1040 aa19.38■□□□□ 0.69
PKP4-204ENST00000421462 ROBO2Q9HCK4 1378 aa19.38■□□□□ 0.69
PKP4-204ENST00000421462 EIF4A1P60842 406 aaKnown RBP19.38■□□□□ 0.69
PKP4-204ENST00000421462 OVOS2A0A0J9YW53 1432 aa19.38■□□□□ 0.69
PKP4-204ENST00000421462 OVOS2Q6IE36 1432 aa19.38■□□□□ 0.69
PKP4-204ENST00000421462 NRDCO43847 1150 aa19.38■□□□□ 0.69
PKP4-204ENST00000421462 DDX46Q7L014 1031 aaKnown RBP19.38■□□□□ 0.69
PKP4-204ENST00000421462 KLHL34Q8N239 644 aa19.38■□□□□ 0.69
PKP4-204ENST00000421462 ZSWIM4Q9H7M6 989 aa19.38■□□□□ 0.69
PKP4-204ENST00000421462 USP42Q9H9J4 1324 aaKnown RBP19.37■□□□□ 0.69
PKP4-204ENST00000421462 BTBD11A6QL63 1104 aa19.37■□□□□ 0.69
PKP4-204ENST00000421462 ADD1P35611 737 aaKnown RBP19.37■□□□□ 0.69
PKP4-204ENST00000421462 TNNT3P45378 269 aaPredicted RBP19.37■□□□□ 0.69
PKP4-204ENST00000421462 CYP21A2P08686 494 aa19.37■□□□□ 0.69
PKP4-204ENST00000421462 ATP1A3P13637 1013 aa19.37■□□□□ 0.69
PKP4-204ENST00000421462 PDIA4P13667 645 aaKnown RBP19.37■□□□□ 0.69
PKP4-204ENST00000421462 NDUFA8P51970 172 aa19.37■□□□□ 0.69
PKP4-204ENST00000421462 TEX35Q5T0J7 233 aa19.37■□□□□ 0.69
PKP4-204ENST00000421462 KRBA2Q6ZNG9 492 aa19.37■□□□□ 0.69
PKP4-204ENST00000421462 UTP14AQ9BVJ6 771 aaKnown RBP19.37■□□□□ 0.69
PKP4-204ENST00000421462 ARGLU1Q9NWB6 273 aaPredicted RBP19.37■□□□□ 0.69
PKP4-204ENST00000421462 NPHP4O75161 1426 aaPredicted RBP19.37■□□□□ 0.69
PKP4-204ENST00000421462 A2ML1A8K2U0 1454 aa19.37■□□□□ 0.69
PKP4-204ENST00000421462 KIF2AO00139 706 aaPredicted RBP19.36■□□□□ 0.69
PKP4-204ENST00000421462 FAM53CQ9NYF3 392 aa19.36■□□□□ 0.69
PKP4-204ENST00000421462 PCDHA7Q9UN72 937 aa19.36■□□□□ 0.69
PKP4-204ENST00000421462 A0A0G2JLW4 131 aa19.36■□□□□ 0.69
PKP4-204ENST00000421462 ESF1Q9H501 851 aaKnown RBP19.36■□□□□ 0.69
PKP4-204ENST00000421462 GJB4Q9NTQ9 266 aa19.36■□□□□ 0.69
PKP4-204ENST00000421462 RCOR1Q9UKL0 485 aa19.36■□□□□ 0.69
PKP4-204ENST00000421462 SBNO1A3KN83 1393 aa19.36■□□□□ 0.69
PKP4-204ENST00000421462 RAD51AP2Q09MP3 1159 aa19.36■□□□□ 0.69
PKP4-204ENST00000421462 STK38Q15208 465 aa19.36■□□□□ 0.69
PKP4-204ENST00000421462 USP6P35125 1406 aa19.35■□□□□ 0.69
PKP4-204ENST00000421462 CYB5RLQ6IPT4 315 aa19.35■□□□□ 0.69
PKP4-204ENST00000421462 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.35■□□□□ 0.69
PKP4-204ENST00000421462 C3P01024 1663 aa19.35■□□□□ 0.69
PKP4-204ENST00000421462 HOXC9P31274 260 aa19.35■□□□□ 0.69
PKP4-204ENST00000421462 NSUN7Q8NE18 718 aaKnown RBP19.35■□□□□ 0.69
PKP4-204ENST00000421462 SMARCE1Q969G3 411 aa19.35■□□□□ 0.69
PKP4-204ENST00000421462 MRPS27Q92552 414 aaKnown RBP19.34■□□□□ 0.69
PKP4-204ENST00000421462 ZNF396Q96N95 335 aaPredicted RBP19.34■□□□□ 0.69
PKP4-204ENST00000421462 NRKQ7Z2Y5 1582 aa19.34■□□□□ 0.69
PKP4-204ENST00000421462 L2HGDHQ9H9P8 463 aa19.34■□□□□ 0.69
PKP4-204ENST00000421462 HMG20BQ9P0W2 317 aa19.34■□□□□ 0.69
PKP4-204ENST00000421462 ORC3Q9UBD5 711 aaPredicted RBP19.34■□□□□ 0.69
PKP4-204ENST00000421462 ITSN1Q15811 1721 aa19.34■□□□□ 0.69
PKP4-204ENST00000421462 MON2Q7Z3U7 1717 aa19.34■□□□□ 0.69
PKP4-204ENST00000421462 FAM208AQ9UK61 1670 aaKnown RBP19.33■□□□□ 0.69
PKP4-204ENST00000421462 SERPINC1P01008 464 aa19.33■□□□□ 0.69
PKP4-204ENST00000421462 EVCP57679 992 aa19.33■□□□□ 0.69
PKP4-204ENST00000421462 C10orf67Q8IYJ2 551 aa19.33■□□□□ 0.69
PKP4-204ENST00000421462 KDRP35968 1356 aa19.33■□□□□ 0.69
PKP4-204ENST00000421462 OAS2P29728 719 aaKnown RBP19.33■□□□□ 0.69
PKP4-204ENST00000421462 ETF1P62495 437 aaKnown RBP19.33■□□□□ 0.69
PKP4-204ENST00000421462 CFAP100Q494V2 611 aa19.33■□□□□ 0.69
PKP4-204ENST00000421462 PDILTQ8N807 584 aa19.33■□□□□ 0.69
PKP4-204ENST00000421462 ENGASEQ8NFI3 743 aa19.33■□□□□ 0.69
PKP4-204ENST00000421462 CTDNEP1O95476 244 aa19.33■□□□□ 0.68
PKP4-204ENST00000421462 KRT32Q14532 448 aa19.33■□□□□ 0.68
PKP4-204ENST00000421462 STOX1Q6ZVD7 989 aa19.33■□□□□ 0.68
PKP4-204ENST00000421462 ABTB2Q8N961 1025 aa19.33■□□□□ 0.68
PKP4-204ENST00000421462 CLIC4Q9Y696 253 aa19.33■□□□□ 0.68
PKP4-204ENST00000421462 CCDC150Q8NCX0 1101 aa19.32■□□□□ 0.68
PKP4-204ENST00000421462 COL15A1P39059 1388 aa19.32■□□□□ 0.68
PKP4-204ENST00000421462 RIMBP3CA6NJZ7 1639 aa19.32■□□□□ 0.68
PKP4-204ENST00000421462 RIMBP3BA6NNM3 1639 aa19.32■□□□□ 0.68
PKP4-204ENST00000421462 RIMBP3Q9UFD9 1639 aa19.32■□□□□ 0.68
PKP4-204ENST00000421462 PLEKHG3A1L390 1219 aa19.32■□□□□ 0.68
PKP4-204ENST00000421462 GRM8O00222 908 aa19.32■□□□□ 0.68
PKP4-204ENST00000421462 SLC3A2P08195 630 aaKnown RBP19.32■□□□□ 0.68
PKP4-204ENST00000421462 MYL6BP14649 208 aa19.32■□□□□ 0.68
PKP4-204ENST00000421462 PIP4K2AP48426 406 aaPredicted RBP19.32■□□□□ 0.68
PKP4-204ENST00000421462 OSBPL5Q9H0X9 879 aaPredicted RBP19.32■□□□□ 0.68
PKP4-204ENST00000421462 GPHNQ9NQX3 736 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms