RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 DEFB123Q8N688 67 aa5.79□□□□□ -1.48
CNGA1-203ENST00000420489 RNF186Q9NXI6 227 aa5.79□□□□□ -1.48
CNGA1-203ENST00000420489 PGAP2Q9UHJ9 254 aa5.79□□□□□ -1.48
CNGA1-203ENST00000420489 CCDC88AQ3V6T2 1871 aa5.79□□□□□ -1.48
CNGA1-203ENST00000420489 CPSF1Q10570 1443 aaKnown RBP5.79□□□□□ -1.48
CNGA1-203ENST00000420489 ZBTB7BO15156 539 aaPredicted RBP5.79□□□□□ -1.48
CNGA1-203ENST00000420489 GPR37L1O60883 481 aa5.79□□□□□ -1.48
CNGA1-203ENST00000420489 PDE4DQ08499 809 aa5.79□□□□□ -1.48
CNGA1-203ENST00000420489 ACAP1Q15027 740 aa5.79□□□□□ -1.48
CNGA1-203ENST00000420489 USP50Q70EL3 339 aaPredicted RBP5.79□□□□□ -1.48
CNGA1-203ENST00000420489 SAPCD2Q86UD0 394 aa5.79□□□□□ -1.48
CNGA1-203ENST00000420489 ALYREFQ86V81 257 aaKnown RBP5.79□□□□□ -1.48
CNGA1-203ENST00000420489 CYP4F22Q6NT55 531 aa5.78□□□□□ -1.48
CNGA1-203ENST00000420489 NLRP13Q86W25 1043 aa5.78□□□□□ -1.48
CNGA1-203ENST00000420489 ATXN2LQ8WWM7 1075 aaKnown RBP5.78□□□□□ -1.48
CNGA1-203ENST00000420489 FAM205AQ6ZU69 1335 aa5.78□□□□□ -1.48
CNGA1-203ENST00000420489 MOXD2PA6NHM9 499 aa5.78□□□□□ -1.48
CNGA1-203ENST00000420489 RIC3Q7Z5B4 369 aa5.78□□□□□ -1.48
CNGA1-203ENST00000420489 MAP3K19Q56UN5 1328 aa5.78□□□□□ -1.48
CNGA1-203ENST00000420489 MAP2P11137 1827 aaKnown RBP5.78□□□□□ -1.48
CNGA1-203ENST00000420489 KCNH2Q12809 1159 aa5.77□□□□□ -1.49
CNGA1-203ENST00000420489 ARMC2Q8NEN0 867 aa5.77□□□□□ -1.49
CNGA1-203ENST00000420489 PRR7Q8TB68 274 aa5.77□□□□□ -1.49
CNGA1-203ENST00000420489 MRC1P22897 1456 aa5.77□□□□□ -1.49
CNGA1-203ENST00000420489 EVA1BQ9NVM1 165 aa5.77□□□□□ -1.49
CNGA1-203ENST00000420489 PCDHGC3Q9UN70 934 aa5.77□□□□□ -1.49
CNGA1-203ENST00000420489 VPS8Q8N3P4 1428 aa5.77□□□□□ -1.49
CNGA1-203ENST00000420489 USP47Q96K76 1375 aa5.77□□□□□ -1.49
CNGA1-203ENST00000420489 GUCA2AQ02747 115 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 RC3H1Q5TC82 1133 aaKnown RBP5.76□□□□□ -1.49
CNGA1-203ENST00000420489 CIAPIN1Q6FI81 312 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 ERICH6Q7L0X2 663 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 CDHR2Q9BYE9 1310 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 ZNF609O15014 1411 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 ANKRD50Q9ULJ7 1429 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 NDUFV2P19404 249 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 EPHX2P34913 555 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 CHRNA2Q15822 529 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 NBPF1Q3BBV0 1214 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 TOM1L2Q6ZVM7 507 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 A0A0G2JLW4 131 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 PLEKHG3A1L390 1219 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 RANGAP1P46060 587 aaPredicted RBP5.76□□□□□ -1.49
CNGA1-203ENST00000420489 EIF5P55010 431 aaKnown RBP5.76□□□□□ -1.49
CNGA1-203ENST00000420489 LYPD8Q6UX82 237 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 HLA-CQ95604 372 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 SENP2Q9HC62 589 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 PARP3Q9Y6F1 533 aa5.76□□□□□ -1.49
CNGA1-203ENST00000420489 AXIN1O15169 862 aa5.75□□□□□ -1.49
CNGA1-203ENST00000420489 MSL1Q68DK7 614 aa5.75□□□□□ -1.49
CNGA1-203ENST00000420489 KIFC2Q96AC6 838 aa5.75□□□□□ -1.49
CNGA1-203ENST00000420489 HDAC9Q9UKV0 1011 aa5.75□□□□□ -1.49
CNGA1-203ENST00000420489 CGNL1Q0VF96 1302 aa5.75□□□□□ -1.49
CNGA1-203ENST00000420489 AOC2O75106 756 aa5.75□□□□□ -1.49
CNGA1-203ENST00000420489 AAASQ9NRG9 546 aa5.75□□□□□ -1.49
CNGA1-203ENST00000420489 FAM155AB1AL88 458 aaPredicted RBP5.74□□□□□ -1.49
CNGA1-203ENST00000420489 VARSP26640 1264 aaKnown RBP5.74□□□□□ -1.49
CNGA1-203ENST00000420489 ARHGEF6Q15052 776 aa5.74□□□□□ -1.49
CNGA1-203ENST00000420489 USP35Q9P2H5 1018 aa5.74□□□□□ -1.49
CNGA1-203ENST00000420489 LCE2BO14633 110 aa5.74□□□□□ -1.49
CNGA1-203ENST00000420489 MMP10P09238 476 aa5.74□□□□□ -1.49
CNGA1-203ENST00000420489 MRGPRX2Q96LB1 330 aa5.74□□□□□ -1.49
CNGA1-203ENST00000420489 SLC24A3Q9HC58 644 aa5.74□□□□□ -1.49
CNGA1-203ENST00000420489 USP31Q70CQ4 1352 aa5.74□□□□□ -1.49
CNGA1-203ENST00000420489 LTN1O94822 1766 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 SOX1O00570 391 aaPredicted RBP5.73□□□□□ -1.49
CNGA1-203ENST00000420489 FKTNO75072 461 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 IL2RBP14784 551 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 CST9Q5W186 159 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 UBE2Q1Q7Z7E8 422 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 EHBP1Q8NDI1 1231 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 GCP02774 474 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 SMPD1P17405 629 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 TMF1P82094 1093 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 HELBQ8NG08 1087 aaPredicted RBP5.73□□□□□ -1.49
CNGA1-203ENST00000420489 GPKOWQ92917 476 aaPredicted RBP eCLIP5.73□□□□□ -1.49
CNGA1-203ENST00000420489 DDRGK1Q96HY6 314 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 PRRX2Q99811 253 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 UNC93B1Q9H1C4 597 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 TIMELESSQ9UNS1 1208 aa5.73□□□□□ -1.49
CNGA1-203ENST00000420489 NFKBIEO00221 500 aa5.72□□□□□ -1.49
CNGA1-203ENST00000420489 TMEM31Q5JXX7 168 aa5.72□□□□□ -1.49
CNGA1-203ENST00000420489 KCNH5Q8NCM2 988 aa5.72□□□□□ -1.49
CNGA1-203ENST00000420489 FAM174AQ8TBP5 190 aa5.72□□□□□ -1.49
CNGA1-203ENST00000420489 ROCK1Q13464 1354 aa5.72□□□□□ -1.49
CNGA1-203ENST00000420489 PNMA1Q8ND90 353 aa5.72□□□□□ -1.49
CNGA1-203ENST00000420489 LRFN3Q9BTN0 628 aa5.72□□□□□ -1.49
CNGA1-203ENST00000420489 IRF2BPLQ9H1B7 796 aa5.72□□□□□ -1.49
CNGA1-203ENST00000420489 WASF2Q9Y6W5 498 aa5.72□□□□□ -1.49
CNGA1-203ENST00000420489 COL5A3P25940 1745 aaPredicted RBP5.72□□□□□ -1.49
CNGA1-203ENST00000420489 TJP1Q07157 1748 aa5.72□□□□□ -1.49
CNGA1-203ENST00000420489 SCN7AQ01118 1682 aa5.72□□□□□ -1.49
CNGA1-203ENST00000420489 ALDH1A1P00352 501 aa5.71□□□□□ -1.49
CNGA1-203ENST00000420489 PRMT2P55345 433 aa5.71□□□□□ -1.49
CNGA1-203ENST00000420489 FKBP1BP68106 108 aa5.71□□□□□ -1.49
CNGA1-203ENST00000420489 MYSM1Q5VVJ2 828 aa5.71□□□□□ -1.49
CNGA1-203ENST00000420489 RGMBQ6NW40 437 aa5.71□□□□□ -1.49
CNGA1-203ENST00000420489 GPC2Q8N158 579 aa5.71□□□□□ -1.49
CNGA1-203ENST00000420489 KAT6BQ8WYB5 2073 aa5.71□□□□□ -1.5
CNGA1-203ENST00000420489 PLEKHH1Q9ULM0 1364 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms