RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 JARID2Q92833 1246 aaPredicted RBP12.12□□□□□ -0.47
NUP50-205ENST00000419387 SEC31BQ9NQW1 1179 aa12.12□□□□□ -0.47
NUP50-205ENST00000419387 ADARB2Q9NS39 739 aaKnown RBP12.12□□□□□ -0.47
NUP50-205ENST00000419387 POLLQ9UGP5 575 aa12.12□□□□□ -0.47
NUP50-205ENST00000419387 CNTNAP1P78357 1384 aa12.11□□□□□ -0.47
NUP50-205ENST00000419387 YDJCA8MPS7 323 aa12.11□□□□□ -0.47
NUP50-205ENST00000419387 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
NUP50-205ENST00000419387 IGKV5-2P06315 115 aa12.11□□□□□ -0.47
NUP50-205ENST00000419387 HSPA1AP0DMV8 641 aaKnown RBP12.11□□□□□ -0.47
NUP50-205ENST00000419387 HSPA1BP0DMV9 641 aaKnown RBP12.11□□□□□ -0.47
NUP50-205ENST00000419387 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
NUP50-205ENST00000419387 EYA3Q99504 573 aa12.11□□□□□ -0.47
NUP50-205ENST00000419387 BCL2L13Q9BXK5 485 aa12.11□□□□□ -0.47
NUP50-205ENST00000419387 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
NUP50-205ENST00000419387 CDHR2Q9BYE9 1310 aa12.11□□□□□ -0.47
NUP50-205ENST00000419387 G2E3Q7L622 706 aa12.1□□□□□ -0.47
NUP50-205ENST00000419387 TBC1D16Q8TBP0 767 aa12.1□□□□□ -0.47
NUP50-205ENST00000419387 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
NUP50-205ENST00000419387 CNOT7Q9UIV1 285 aaKnown RBP12.1□□□□□ -0.47
NUP50-205ENST00000419387 DUOX1Q9NRD9 1551 aa12.09□□□□□ -0.47
NUP50-205ENST00000419387 LRRC37AA6NMS7 1700 aa12.09□□□□□ -0.47
NUP50-205ENST00000419387 VEGFBP49765 207 aa12.09□□□□□ -0.47
NUP50-205ENST00000419387 DEFB115Q30KQ5 88 aa12.09□□□□□ -0.47
NUP50-205ENST00000419387 COL13A1Q5TAT6 717 aaPredicted RBP12.09□□□□□ -0.47
NUP50-205ENST00000419387 CCDC85AQ96PX6 553 aaPredicted RBP12.09□□□□□ -0.47
NUP50-205ENST00000419387 DBNDD1Q9H9R9 158 aa12.09□□□□□ -0.47
NUP50-205ENST00000419387 ANKIB1Q9P2G1 1089 aa12.09□□□□□ -0.47
NUP50-205ENST00000419387 COL4A1P02462 1669 aa12.09□□□□□ -0.47
NUP50-205ENST00000419387 FANCIQ9NVI1 1328 aa12.09□□□□□ -0.47
NUP50-205ENST00000419387 RASSF10A6NK89 507 aa12.08□□□□□ -0.48
NUP50-205ENST00000419387 NEURL1BA8MQ27 555 aa12.08□□□□□ -0.48
NUP50-205ENST00000419387 H7C1D1 291 aa12.08□□□□□ -0.48
NUP50-205ENST00000419387 PSMD14O00487 310 aa12.08□□□□□ -0.48
NUP50-205ENST00000419387 ECE2O60344 883 aa12.08□□□□□ -0.48
NUP50-205ENST00000419387 VAMP4O75379 141 aa12.08□□□□□ -0.48
NUP50-205ENST00000419387 CTSWP56202 376 aa12.08□□□□□ -0.48
NUP50-205ENST00000419387 FMR1Q06787 632 aaKnown RBP eCLIP12.08□□□□□ -0.48
NUP50-205ENST00000419387 DOK7Q18PE1 504 aa12.08□□□□□ -0.48
NUP50-205ENST00000419387 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
NUP50-205ENST00000419387 ANKRD18AQ8IVF6 992 aa12.08□□□□□ -0.48
NUP50-205ENST00000419387 DPF2Q92785 391 aa12.08□□□□□ -0.48
NUP50-205ENST00000419387 GPR101Q96P66 508 aaPredicted RBP12.08□□□□□ -0.48
NUP50-205ENST00000419387 ZC3H12CQ9C0D7 883 aaKnown RBP12.08□□□□□ -0.48
NUP50-205ENST00000419387 PGAP2Q9UHJ9 254 aa12.08□□□□□ -0.48
NUP50-205ENST00000419387 GGA1Q9UJY5 639 aa12.08□□□□□ -0.48
NUP50-205ENST00000419387 H7C1W4 665 aa12.07□□□□□ -0.48
NUP50-205ENST00000419387 TRAF5O00463 557 aa12.07□□□□□ -0.48
NUP50-205ENST00000419387 UFL1O94874 794 aa12.07□□□□□ -0.48
NUP50-205ENST00000419387 HIRAP54198 1017 aaPredicted RBP12.07□□□□□ -0.48
NUP50-205ENST00000419387 EXOSC9Q06265 439 aaKnown RBP12.07□□□□□ -0.48
NUP50-205ENST00000419387 FLIIQ13045 1269 aa12.07□□□□□ -0.48
NUP50-205ENST00000419387 FAM9BQ8IZU0 186 aa12.07□□□□□ -0.48
NUP50-205ENST00000419387 TTLL11Q8NHH1 800 aa12.07□□□□□ -0.48
NUP50-205ENST00000419387 ZC3H15Q8WU90 426 aaKnown RBP12.07□□□□□ -0.48
NUP50-205ENST00000419387 CDC5LQ99459 802 aaKnown RBP12.07□□□□□ -0.48
NUP50-205ENST00000419387 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
NUP50-205ENST00000419387 ABT1Q9ULW3 272 aaKnown RBP12.07□□□□□ -0.48
NUP50-205ENST00000419387 SHTN1A0MZ66 631 aa12.06□□□□□ -0.48
NUP50-205ENST00000419387 G3V3G9 751 aa12.06□□□□□ -0.48
NUP50-205ENST00000419387 RPS12P25398 132 aaKnown RBP12.06□□□□□ -0.48
NUP50-205ENST00000419387 FKBP5Q13451 457 aaPredicted RBP12.06□□□□□ -0.48
NUP50-205ENST00000419387 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
NUP50-205ENST00000419387 CST9Q5W186 159 aa12.06□□□□□ -0.48
NUP50-205ENST00000419387 MICALL2Q8IY33 904 aa12.06□□□□□ -0.48
NUP50-205ENST00000419387 TRPM4Q8TD43 1214 aa12.06□□□□□ -0.48
NUP50-205ENST00000419387 DNAAF4Q8WXU2 420 aa12.06□□□□□ -0.48
NUP50-205ENST00000419387 XDHP47989 1333 aa12.06□□□□□ -0.48
NUP50-205ENST00000419387 VIL1P09327 827 aaKnown RBP12.05□□□□□ -0.48
NUP50-205ENST00000419387 ATP2B4P23634 1241 aa12.05□□□□□ -0.48
NUP50-205ENST00000419387 GCKRQ14397 625 aa12.05□□□□□ -0.48
NUP50-205ENST00000419387 UBE3BQ7Z3V4 1068 aa12.05□□□□□ -0.48
NUP50-205ENST00000419387 GLIS2Q9BZE0 524 aaPredicted RBP12.05□□□□□ -0.48
NUP50-205ENST00000419387 MYH16Q9H6N6 1097 aa12.05□□□□□ -0.48
NUP50-205ENST00000419387 BSDC1Q9NW68 430 aaPredicted RBP12.05□□□□□ -0.48
NUP50-205ENST00000419387 WDR33Q9C0J8 1336 aaKnown RBP12.05□□□□□ -0.48
NUP50-205ENST00000419387 RTL9Q8NET4 1388 aa12.05□□□□□ -0.48
NUP50-205ENST00000419387 CDC37L1Q7L3B6 337 aa12.04□□□□□ -0.48
NUP50-205ENST00000419387 SAMD7Q7Z3H4 446 aa12.04□□□□□ -0.48
NUP50-205ENST00000419387 LINS1Q8NG48 757 aa12.04□□□□□ -0.48
NUP50-205ENST00000419387 PLA2G12BQ9BX93 195 aa12.04□□□□□ -0.48
NUP50-205ENST00000419387 GREM2Q9H772 168 aa12.04□□□□□ -0.48
NUP50-205ENST00000419387 MINPP1Q9UNW1 487 aa12.04□□□□□ -0.48
NUP50-205ENST00000419387 TLL2Q9Y6L7 1015 aa12.04□□□□□ -0.48
NUP50-205ENST00000419387 FOXN1O15353 648 aa12.03□□□□□ -0.48
NUP50-205ENST00000419387 CELF2O95319 508 aaKnown RBP12.03□□□□□ -0.48
NUP50-205ENST00000419387 CASP7P55210 303 aa12.03□□□□□ -0.48
NUP50-205ENST00000419387 TBC1D10BQ4KMP7 808 aaPredicted RBP12.03□□□□□ -0.48
NUP50-205ENST00000419387 TNS4Q8IZW8 715 aa12.03□□□□□ -0.48
NUP50-205ENST00000419387 AIDAQ96BJ3 306 aa12.03□□□□□ -0.48
NUP50-205ENST00000419387 WBP1LQ9NX94 342 aa12.03□□□□□ -0.48
NUP50-205ENST00000419387 PCNTO95613 3336 aa12.03□□□□□ -0.48
NUP50-205ENST00000419387 GABBR2O75899 941 aa12.02□□□□□ -0.49
NUP50-205ENST00000419387 CSF1RP07333 972 aa12.02□□□□□ -0.49
NUP50-205ENST00000419387 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
NUP50-205ENST00000419387 IGHMBP2P38935 993 aaKnown RBP12.02□□□□□ -0.49
NUP50-205ENST00000419387 ECE1P42892 770 aa12.02□□□□□ -0.49
NUP50-205ENST00000419387 MAP2K1Q02750 393 aaPredicted RBP12.02□□□□□ -0.49
NUP50-205ENST00000419387 RBM26Q5T8P6 1007 aaKnown RBP12.02□□□□□ -0.49
NUP50-205ENST00000419387 PAXIP1Q6ZW49 1069 aaPredicted RBP12.02□□□□□ -0.49
NUP50-205ENST00000419387 PODNQ7Z5L7 613 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms