RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SLC6A14Q9UN76 642 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 AMOTL2Q9Y2J4 779 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 LOC102724428A0A0B4J2F2 783 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 PNMA6FA0A0J9YX94 578 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 ZBTB42B2RXF5 422 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 EIF1AYO14602 144 aaKnown RBP4.58□□□□□ -1.68
VPS41-206ENST00000418457 EREGO14944 169 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 GHRHP01286 108 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 SIK1P57059 783 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 MAP3K10Q02779 954 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 HFE2Q6ZVN8 426 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 FAM35AQ86V20 835 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 NCAPG2Q86XI2 1143 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 SVOPQ8N4V2 548 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 WHAMMQ8TF30 809 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 SPACA7Q96KW9 195 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 MDFIQ99750 246 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 RBSNQ9H1K0 784 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 LRRC4BQ9NT99 713 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 SALL4Q9UJQ4 1053 aa4.58□□□□□ -1.68
VPS41-206ENST00000418457 J3QW42 95 aa4.57□□□□□ -1.68
VPS41-206ENST00000418457 KIF4AO95239 1232 aa4.57□□□□□ -1.68
VPS41-206ENST00000418457 POLR3DP05423 398 aaPredicted RBP4.57□□□□□ -1.68
VPS41-206ENST00000418457 P4HBP07237 508 aaKnown RBP4.57□□□□□ -1.68
VPS41-206ENST00000418457 EDN3P14138 238 aa4.57□□□□□ -1.68
VPS41-206ENST00000418457 CPB1P15086 417 aa4.57□□□□□ -1.68
VPS41-206ENST00000418457 EIF2AK2P19525 551 aaKnown RBP4.57□□□□□ -1.68
VPS41-206ENST00000418457 AMPD1P23109 780 aa4.57□□□□□ -1.68
VPS41-206ENST00000418457 ATP2B2Q01814 1243 aa4.57□□□□□ -1.68
VPS41-206ENST00000418457 ENOX2Q16206 610 aaKnown RBP4.57□□□□□ -1.68
VPS41-206ENST00000418457 EAPPQ56P03 285 aaPredicted RBP4.57□□□□□ -1.68
VPS41-206ENST00000418457 COL13A1Q5TAT6 717 aaPredicted RBP4.57□□□□□ -1.68
VPS41-206ENST00000418457 USPL1Q5W0Q7 1092 aa4.57□□□□□ -1.68
VPS41-206ENST00000418457 ZNF385CQ66K41 422 aaPredicted RBP4.57□□□□□ -1.68
VPS41-206ENST00000418457 ENAMQ9NRM1 1142 aa4.57□□□□□ -1.68
VPS41-206ENST00000418457 SHISA8B8ZZ34 492 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 FGD1P98174 961 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 INSM1Q01101 510 aaPredicted RBP4.56□□□□□ -1.68
VPS41-206ENST00000418457 PERM1Q5SV97 790 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 PSAPL1Q6NUJ1 521 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 KANK3Q6NY19 840 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 ELMSAN1Q6PJG2 1045 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 CHSY3Q70JA7 882 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 GALNT12Q8IXK2 581 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 MICALL1Q8N3F8 863 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 ZSCAN1Q8NBB4 408 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 NEDD1Q8NHV4 660 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 CCDC74AQ96AQ1 378 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 BTBD6Q96KE9 485 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 NPHS2Q9NP85 383 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 FRRS1LQ9P0K9 344 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 NAGPAQ9UK23 515 aa4.56□□□□□ -1.68
VPS41-206ENST00000418457 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.56□□□□□ -1.68
VPS41-206ENST00000418457 RGS9O75916 674 aaPredicted RBP4.55□□□□□ -1.68
VPS41-206ENST00000418457 ALBP02768 609 aa4.55□□□□□ -1.68
VPS41-206ENST00000418457 LDHBP07195 334 aaKnown RBP4.55□□□□□ -1.68
VPS41-206ENST00000418457 ALG1LQ6GMV1 187 aa4.55□□□□□ -1.68
VPS41-206ENST00000418457 CEP120Q8N960 986 aa4.55□□□□□ -1.68
VPS41-206ENST00000418457 FBF1Q8TES7 1133 aa4.55□□□□□ -1.68
VPS41-206ENST00000418457 NUDT8Q8WV74 236 aa4.55□□□□□ -1.68
VPS41-206ENST00000418457 PLD4Q96BZ4 506 aa4.55□□□□□ -1.68
VPS41-206ENST00000418457 LPIN3Q9BQK8 851 aa4.55□□□□□ -1.68
VPS41-206ENST00000418457 BCL2L13Q9BXK5 485 aa4.55□□□□□ -1.68
VPS41-206ENST00000418457 NLRP2Q9NX02 1062 aa4.55□□□□□ -1.68
VPS41-206ENST00000418457 WWC3Q9ULE0 1092 aa4.55□□□□□ -1.68
VPS41-206ENST00000418457 STARD13Q9Y3M8 1113 aa4.55□□□□□ -1.68
VPS41-206ENST00000418457 M0R082 166 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 GADD45BO75293 160 aaPredicted RBP4.54□□□□□ -1.68
VPS41-206ENST00000418457 SMNDC1O75940 238 aaKnown RBP eCLIP4.54□□□□□ -1.68
VPS41-206ENST00000418457 ACPPP15309 386 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 ATP11AP98196 1134 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 FBXO33Q7Z6M2 555 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 RGS22Q8NE09 1264 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 ZNF417Q8TAU3 575 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 ZNF587Q96SQ5 575 aaPredicted RBP4.54□□□□□ -1.68
VPS41-206ENST00000418457 OSMRQ99650 979 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 ZKSCAN3Q9BRR0 538 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 PBX4Q9BYU1 374 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 SMG9Q9H0W8 520 aaKnown RBP4.54□□□□□ -1.68
VPS41-206ENST00000418457 RASSF4Q9H2L5 321 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 RRAGCQ9HB90 399 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 JPH1Q9HDC5 661 aaPredicted RBP4.54□□□□□ -1.68
VPS41-206ENST00000418457 LATS2Q9NRM7 1088 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 DZANK1Q9NVP4 752 aa4.54□□□□□ -1.68
VPS41-206ENST00000418457 A0A1W2PP55 124 aa4.53□□□□□ -1.68
VPS41-206ENST00000418457 LILRB5O75023 590 aa4.53□□□□□ -1.68
VPS41-206ENST00000418457 PRPF40AO75400 957 aaKnown RBP4.53□□□□□ -1.68
VPS41-206ENST00000418457 TRPA1O75762 1119 aa4.53□□□□□ -1.68
VPS41-206ENST00000418457 ARHGEF15O94989 841 aa4.53□□□□□ -1.68
VPS41-206ENST00000418457 LORP23490 312 aaPredicted RBP4.53□□□□□ -1.68
VPS41-206ENST00000418457 IRS1P35568 1242 aa4.53□□□□□ -1.68
VPS41-206ENST00000418457 ZNF326Q5BKZ1 582 aaKnown RBP4.53□□□□□ -1.68
VPS41-206ENST00000418457 PEAR1Q5VY43 1037 aaPredicted RBP4.53□□□□□ -1.68
VPS41-206ENST00000418457 CEP135Q66GS9 1140 aa4.53□□□□□ -1.68
VPS41-206ENST00000418457 C20orf204Q6ZNR8 217 aa4.53□□□□□ -1.68
VPS41-206ENST00000418457 EPS8L3Q8TE67 593 aaKnown RBP4.53□□□□□ -1.68
VPS41-206ENST00000418457 GIPC2Q8TF65 315 aa4.53□□□□□ -1.68
VPS41-206ENST00000418457 TTC9Q92623 222 aa4.53□□□□□ -1.68
VPS41-206ENST00000418457 SETDB2Q96T68 719 aa4.53□□□□□ -1.68
VPS41-206ENST00000418457 EHD4Q9H223 541 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 725.8 ms