RNA–Protein interactions for RNA: ENST00000418381.5

UBR3-203, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 7,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-203ENST00000418381 NAP1L3Q99457 506 aaPredicted RBP20.16■□□□□ 0.82
UBR3-203ENST00000418381 CACYBPQ9HB71 228 aaKnown RBP20.15■□□□□ 0.82
UBR3-203ENST00000418381 NSD3Q9BZ95 1437 aa20.15■□□□□ 0.82
UBR3-203ENST00000418381 DAAM2Q86T65 1068 aa20.15■□□□□ 0.82
UBR3-203ENST00000418381 ZSWIM4Q9H7M6 989 aa20.15■□□□□ 0.82
UBR3-203ENST00000418381 PHF8Q9UPP1 1060 aa20.15■□□□□ 0.82
UBR3-203ENST00000418381 CFAP157Q5JU67 520 aa20.15■□□□□ 0.82
UBR3-203ENST00000418381 NAA16Q6N069 864 aaPredicted RBP20.15■□□□□ 0.82
UBR3-203ENST00000418381 UAP1Q16222 522 aaPredicted RBP20.15■□□□□ 0.82
UBR3-203ENST00000418381 FAM47CQ5HY64 1035 aa20.15■□□□□ 0.82
UBR3-203ENST00000418381 CCDC89Q8N998 374 aa20.15■□□□□ 0.82
UBR3-203ENST00000418381 TRERF1Q96PN7 1200 aa20.15■□□□□ 0.82
UBR3-203ENST00000418381 SLC52A1Q9NWF4 448 aa20.15■□□□□ 0.82
UBR3-203ENST00000418381 TEX13AQ9BXU3 409 aaPredicted RBP20.15■□□□□ 0.82
UBR3-203ENST00000418381 LRRC27Q9C0I9 530 aa20.15■□□□□ 0.82
UBR3-203ENST00000418381 RNF216Q9NWF9 866 aaPredicted RBP20.14■□□□□ 0.82
UBR3-203ENST00000418381 NYXQ9GZU5 481 aa20.14■□□□□ 0.82
UBR3-203ENST00000418381 SPECC1LQ69YQ0 1117 aa20.14■□□□□ 0.81
UBR3-203ENST00000418381 TCIRG1Q13488 830 aa20.14■□□□□ 0.81
UBR3-203ENST00000418381 FNBP4Q8N3X1 1017 aaPredicted RBP20.14■□□□□ 0.81
UBR3-203ENST00000418381 CCDC61Q9Y6R9 512 aa20.14■□□□□ 0.81
UBR3-203ENST00000418381 E7EVH7 732 aa20.14■□□□□ 0.81
UBR3-203ENST00000418381 CEP112Q8N8E3 955 aa20.14■□□□□ 0.81
UBR3-203ENST00000418381 SPAG5Q96R06 1193 aa20.14■□□□□ 0.81
UBR3-203ENST00000418381 DDB1Q16531 1140 aa20.13■□□□□ 0.81
UBR3-203ENST00000418381 RSPH3Q86UC2 560 aa20.13■□□□□ 0.81
UBR3-203ENST00000418381 EIF6P56537 245 aaKnown RBP20.13■□□□□ 0.81
UBR3-203ENST00000418381 SLC8A3P57103 927 aa20.13■□□□□ 0.81
UBR3-203ENST00000418381 FGD5Q6ZNL6 1462 aa20.13■□□□□ 0.81
UBR3-203ENST00000418381 M0QZ92 97 aa20.13■□□□□ 0.81
UBR3-203ENST00000418381 CGNQ9P2M7 1197 aaKnown RBP20.13■□□□□ 0.81
UBR3-203ENST00000418381 KIF5AQ12840 1032 aa20.13■□□□□ 0.81
UBR3-203ENST00000418381 DNAAF4Q8WXU2 420 aa20.13■□□□□ 0.81
UBR3-203ENST00000418381 TFIP11Q9UBB9 837 aaKnown RBP20.13■□□□□ 0.81
UBR3-203ENST00000418381 CKAP4Q07065 602 aaKnown RBP20.13■□□□□ 0.81
UBR3-203ENST00000418381 ANKRD24Q8TF21 1146 aa20.12■□□□□ 0.81
UBR3-203ENST00000418381 IRAK4Q9NWZ3 460 aa20.12■□□□□ 0.81
UBR3-203ENST00000418381 ERCC5P28715 1186 aaPredicted RBP20.12■□□□□ 0.81
UBR3-203ENST00000418381 MAEAQ7L5Y9 396 aa20.12■□□□□ 0.81
UBR3-203ENST00000418381 FANCIQ9NVI1 1328 aa20.12■□□□□ 0.81
UBR3-203ENST00000418381 CHMP2AO43633 222 aa20.12■□□□□ 0.81
UBR3-203ENST00000418381 CCDC25Q86WR0 208 aa20.12■□□□□ 0.81
UBR3-203ENST00000418381 C4orf50Q6ZRC1 276 aa20.12■□□□□ 0.81
UBR3-203ENST00000418381 MSANTD4Q8NCY6 345 aa20.12■□□□□ 0.81
UBR3-203ENST00000418381 NCOA7Q8NI08 942 aa20.12■□□□□ 0.81
UBR3-203ENST00000418381 GTPBP4Q9BZE4 634 aaKnown RBP20.12■□□□□ 0.81
UBR3-203ENST00000418381 MAGEB6P1A0A0J9YX57 407 aa20.11■□□□□ 0.81
UBR3-203ENST00000418381 HSF2BPO75031 334 aa20.11■□□□□ 0.81
UBR3-203ENST00000418381 MICALCLQ6ZW33 695 aa20.11■□□□□ 0.81
UBR3-203ENST00000418381 TBC1D31Q96DN5 1066 aa20.11■□□□□ 0.81
UBR3-203ENST00000418381 IFNL2Q8IZJ0 200 aa20.11■□□□□ 0.81
UBR3-203ENST00000418381 SELENOOQ9BVL4 669 aa20.11■□□□□ 0.81
UBR3-203ENST00000418381 SBNO2Q9Y2G9 1366 aa20.11■□□□□ 0.81
UBR3-203ENST00000418381 TMPOP42166 694 aaKnown RBP20.11■□□□□ 0.81
UBR3-203ENST00000418381 RASAL2Q9UJF2 1139 aa20.11■□□□□ 0.81
UBR3-203ENST00000418381 PTPDC1A2A3K4 754 aa20.11■□□□□ 0.81
UBR3-203ENST00000418381 RRP36Q96EU6 259 aaKnown RBP20.11■□□□□ 0.81
UBR3-203ENST00000418381 MYCLP12524 364 aaPredicted RBP20.11■□□□□ 0.81
UBR3-203ENST00000418381 RRAGBQ5VZM2 374 aa20.11■□□□□ 0.81
UBR3-203ENST00000418381 NME9Q86XW9 330 aa20.11■□□□□ 0.81
UBR3-203ENST00000418381 STK32BQ9NY57 414 aa20.11■□□□□ 0.81
UBR3-203ENST00000418381 AFG3L2Q9Y4W6 797 aa20.1■□□□□ 0.81
UBR3-203ENST00000418381 SPDYE16A6NNV3 312 aaPredicted RBP20.1■□□□□ 0.81
UBR3-203ENST00000418381 SPDYE2Q495Y8 402 aa20.1■□□□□ 0.81
UBR3-203ENST00000418381 DCAF17Q5H9S7 520 aaPredicted RBP20.1■□□□□ 0.81
UBR3-203ENST00000418381 RNF169Q8NCN4 708 aa20.1■□□□□ 0.81
UBR3-203ENST00000418381 BRD4O60885 1362 aaPredicted RBP20.1■□□□□ 0.81
UBR3-203ENST00000418381 DDX39AO00148 427 aaKnown RBP20.1■□□□□ 0.81
UBR3-203ENST00000418381 KIF18AQ8NI77 898 aa20.1■□□□□ 0.81
UBR3-203ENST00000418381 PPP4R4Q6NUP7 873 aa20.1■□□□□ 0.81
UBR3-203ENST00000418381 GRPEL1Q9HAV7 217 aa20.09■□□□□ 0.81
UBR3-203ENST00000418381 TSHZ3Q63HK5 1081 aa20.09■□□□□ 0.81
UBR3-203ENST00000418381 PLIN2Q99541 437 aa20.09■□□□□ 0.81
UBR3-203ENST00000418381 MKRN1Q9UHC7 482 aaKnown RBP20.09■□□□□ 0.81
UBR3-203ENST00000418381 CCDC169A6NNP5 214 aa20.09■□□□□ 0.81
UBR3-203ENST00000418381 WDR63Q8IWG1 891 aa20.09■□□□□ 0.81
UBR3-203ENST00000418381 SMCR8Q8TEV9 937 aaPredicted RBP20.09■□□□□ 0.81
UBR3-203ENST00000418381 KIF22Q14807 665 aa20.09■□□□□ 0.81
UBR3-203ENST00000418381 TTC30AQ86WT1 665 aa20.09■□□□□ 0.81
UBR3-203ENST00000418381 ZCRB1Q8TBF4 217 aaKnown RBP20.09■□□□□ 0.81
UBR3-203ENST00000418381 DDX12PQ92771 950 aa20.09■□□□□ 0.81
UBR3-203ENST00000418381 DBF4Q9UBU7 674 aaPredicted RBP20.09■□□□□ 0.81
UBR3-203ENST00000418381 ASIC1P78348 528 aa20.09■□□□□ 0.81
UBR3-203ENST00000418381 LRRC2Q9BYS8 371 aa20.09■□□□□ 0.81
UBR3-203ENST00000418381 XRCC6P12956 609 aaKnown RBP eCLIP20.08■□□□□ 0.81
UBR3-203ENST00000418381 NBPF7P0C2Y1 421 aaPredicted RBP20.08■□□□□ 0.81
UBR3-203ENST00000418381 CHST3Q7LGC8 479 aa20.08■□□□□ 0.81
UBR3-203ENST00000418381 MCM9Q9NXL9 1143 aa20.08■□□□□ 0.81
UBR3-203ENST00000418381 MIGA1Q8NAN2 632 aa20.08■□□□□ 0.8
UBR3-203ENST00000418381 BIRC3Q13489 604 aa20.08■□□□□ 0.8
UBR3-203ENST00000418381 SELENOSQ9BQE4 189 aa20.08■□□□□ 0.8
UBR3-203ENST00000418381 RTN1Q16799 776 aa20.08■□□□□ 0.8
UBR3-203ENST00000418381 ORC3Q9UBD5 711 aaPredicted RBP20.08■□□□□ 0.8
UBR3-203ENST00000418381 RPUSD2Q8IZ73 545 aaKnown RBP20.07■□□□□ 0.8
UBR3-203ENST00000418381 FNBP1Q96RU3 617 aa20.07■□□□□ 0.8
UBR3-203ENST00000418381 LMTK3Q96Q04 1460 aa20.07■□□□□ 0.8
UBR3-203ENST00000418381 C11orf95C9JLR9 678 aaPredicted RBP20.07■□□□□ 0.8
UBR3-203ENST00000418381 TRAF1Q13077 416 aa20.07■□□□□ 0.8
UBR3-203ENST00000418381 MRRFQ96E11 262 aaKnown RBP20.07■□□□□ 0.8
UBR3-203ENST00000418381 UIMC1Q96RL1 719 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms