RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 ZBTB42B2RXF5 422 aa8.23□□□□□ -1.09
RFC4-204ENST00000417876 C11orf95C9JLR9 678 aaPredicted RBP8.23□□□□□ -1.09
RFC4-204ENST00000417876 GIPC1O14908 333 aa8.23□□□□□ -1.09
RFC4-204ENST00000417876 GADD45BO75293 160 aaPredicted RBP8.23□□□□□ -1.09
RFC4-204ENST00000417876 TRPA1O75762 1119 aa8.23□□□□□ -1.09
RFC4-204ENST00000417876 KIF4AO95239 1232 aa8.23□□□□□ -1.09
RFC4-204ENST00000417876 MAP3K6O95382 1288 aa8.23□□□□□ -1.09
RFC4-204ENST00000417876 FAM182BQ5T319 152 aa8.23□□□□□ -1.09
RFC4-204ENST00000417876 KIAA0319Q5VV43 1072 aa8.23□□□□□ -1.09
RFC4-204ENST00000417876 PNMA5Q96PV4 448 aa8.23□□□□□ -1.09
RFC4-204ENST00000417876 SUV39H2Q9H5I1 410 aa8.23□□□□□ -1.09
RFC4-204ENST00000417876 USP31Q70CQ4 1352 aa8.22□□□□□ -1.09
RFC4-204ENST00000417876 CDC14CA4D256 554 aa8.22□□□□□ -1.09
RFC4-204ENST00000417876 USP17L7P0C7H9 530 aa8.22□□□□□ -1.09
RFC4-204ENST00000417876 ERCC5P28715 1186 aaPredicted RBP8.22□□□□□ -1.09
RFC4-204ENST00000417876 DHX32Q7L7V1 743 aaKnown RBP8.22□□□□□ -1.09
RFC4-204ENST00000417876 NT5DC4Q86YG4 428 aa8.22□□□□□ -1.09
RFC4-204ENST00000417876 METTL5Q9NRN9 209 aaKnown RBP8.22□□□□□ -1.09
RFC4-204ENST00000417876 FAM8A1Q9UBU6 413 aa8.22□□□□□ -1.09
RFC4-204ENST00000417876 PHF20L1A8MW92 1017 aa8.21□□□□□ -1.1
RFC4-204ENST00000417876 ZNF76P36508 570 aa8.21□□□□□ -1.1
RFC4-204ENST00000417876 CEP120Q8N960 986 aa8.21□□□□□ -1.1
RFC4-204ENST00000417876 NANOS1Q8WY41 292 aaKnown RBP8.21□□□□□ -1.1
RFC4-204ENST00000417876 RNF34Q969K3 372 aa8.21□□□□□ -1.1
RFC4-204ENST00000417876 TCF12Q99081 682 aa8.21□□□□□ -1.1
RFC4-204ENST00000417876 PSAPP07602 524 aa8.2□□□□□ -1.1
RFC4-204ENST00000417876 HOXD8P13378 290 aaPredicted RBP8.2□□□□□ -1.1
RFC4-204ENST00000417876 EDN3P14138 238 aa8.2□□□□□ -1.1
RFC4-204ENST00000417876 SOX18P35713 384 aa8.2□□□□□ -1.1
RFC4-204ENST00000417876 C3orf58Q8NDZ4 430 aa8.2□□□□□ -1.1
RFC4-204ENST00000417876 NSUN5Q96P11 429 aaKnown RBP8.2□□□□□ -1.1
RFC4-204ENST00000417876 HHIPQ96QV1 700 aa8.2□□□□□ -1.1
RFC4-204ENST00000417876 ZKSCAN3Q9BRR0 538 aa8.2□□□□□ -1.1
RFC4-204ENST00000417876 EHD4Q9H223 541 aa8.2□□□□□ -1.1
RFC4-204ENST00000417876 EFCC1Q9HA90 598 aa8.2□□□□□ -1.1
RFC4-204ENST00000417876 J3QW42 95 aa8.19□□□□□ -1.1
RFC4-204ENST00000417876 NFKBIEO00221 500 aa8.19□□□□□ -1.1
RFC4-204ENST00000417876 ITGAEP38570 1179 aa8.19□□□□□ -1.1
RFC4-204ENST00000417876 MLLT1Q03111 559 aaPredicted RBP8.19□□□□□ -1.1
RFC4-204ENST00000417876 PLAURQ03405 335 aa8.19□□□□□ -1.1
RFC4-204ENST00000417876 TAF1CQ15572 869 aaPredicted RBP8.19□□□□□ -1.1
RFC4-204ENST00000417876 HFE2Q6ZVN8 426 aa8.19□□□□□ -1.1
RFC4-204ENST00000417876 SV2AQ7L0J3 742 aa8.19□□□□□ -1.1
RFC4-204ENST00000417876 NCAPG2Q86XI2 1143 aa8.19□□□□□ -1.1
RFC4-204ENST00000417876 GPR161Q8N6U8 529 aaKnown RBP8.19□□□□□ -1.1
RFC4-204ENST00000417876 OSMRQ99650 979 aa8.19□□□□□ -1.1
RFC4-204ENST00000417876 SRCIN1Q9C0H9 1055 aa8.19□□□□□ -1.1
RFC4-204ENST00000417876 KLF15Q9UIH9 416 aa8.19□□□□□ -1.1
RFC4-204ENST00000417876 HYAL2Q12891 473 aa8.18□□□□□ -1.1
RFC4-204ENST00000417876 GAS6Q14393 721 aa8.18□□□□□ -1.1
RFC4-204ENST00000417876 SYT9Q86SS6 491 aa8.18□□□□□ -1.1
RFC4-204ENST00000417876 TRPM4Q8TD43 1214 aa8.18□□□□□ -1.1
RFC4-204ENST00000417876 C8orf37Q96NL8 207 aa8.18□□□□□ -1.1
RFC4-204ENST00000417876 ABCB6Q9NP58 842 aa8.18□□□□□ -1.1
RFC4-204ENST00000417876 DZANK1Q9NVP4 752 aa8.18□□□□□ -1.1
RFC4-204ENST00000417876 PHF24Q9UPV7 400 aa8.18□□□□□ -1.1
RFC4-204ENST00000417876 LOC102724428A0A0B4J2F2 783 aa8.17□□□□□ -1.1
RFC4-204ENST00000417876 GRIA4P48058 902 aa8.17□□□□□ -1.1
RFC4-204ENST00000417876 NRLP54845 237 aa8.17□□□□□ -1.1
RFC4-204ENST00000417876 FCGRTP55899 365 aa8.17□□□□□ -1.1
RFC4-204ENST00000417876 SIK1P57059 783 aa8.17□□□□□ -1.1
RFC4-204ENST00000417876 ZC3H6P61129 1189 aaKnown RBP8.17□□□□□ -1.1
RFC4-204ENST00000417876 RACK1P63244 317 aaKnown RBP8.17□□□□□ -1.1
RFC4-204ENST00000417876 MAP3K10Q02779 954 aa8.17□□□□□ -1.1
RFC4-204ENST00000417876 PTPN12Q05209 780 aaKnown RBP8.17□□□□□ -1.1
RFC4-204ENST00000417876 ZNF394Q53GI3 561 aa8.17□□□□□ -1.1
RFC4-204ENST00000417876 PRPF40BQ6NWY9 871 aaKnown RBP8.17□□□□□ -1.1
RFC4-204ENST00000417876 CCNJLQ8IV13 435 aa8.17□□□□□ -1.1
RFC4-204ENST00000417876 TRERF1Q96PN7 1200 aa8.17□□□□□ -1.1
RFC4-204ENST00000417876 IGFLR1Q9H665 355 aa8.17□□□□□ -1.1
RFC4-204ENST00000417876 LIN7BQ9HAP6 207 aa8.17□□□□□ -1.1
RFC4-204ENST00000417876 TMEM238LA0A1B0GVL6 79 aa8.16□□□□□ -1.1
RFC4-204ENST00000417876 METTL12A8MUP2 240 aa8.16□□□□□ -1.1
RFC4-204ENST00000417876 PCBP4P57723 403 aaKnown RBP8.16□□□□□ -1.1
RFC4-204ENST00000417876 GPLD1P80108 840 aa8.16□□□□□ -1.1
RFC4-204ENST00000417876 NAALADL2Q58DX5 795 aa8.16□□□□□ -1.1
RFC4-204ENST00000417876 ZNF468Q5VIY5 522 aaPredicted RBP8.16□□□□□ -1.1
RFC4-204ENST00000417876 ADAMTSL4Q6UY14 1074 aa8.16□□□□□ -1.1
RFC4-204ENST00000417876 DNAJB12Q9NXW2 375 aaKnown RBP8.16□□□□□ -1.1
RFC4-204ENST00000417876 PRR12Q9ULL5 1215 aa8.16□□□□□ -1.1
RFC4-204ENST00000417876 PCDHGB7Q9Y5F8 929 aa8.16□□□□□ -1.1
RFC4-204ENST00000417876 GSTT1P30711 240 aa8.15□□□□□ -1.1
RFC4-204ENST00000417876 ST13P50502 369 aaKnown RBP8.15□□□□□ -1.1
RFC4-204ENST00000417876 ATP11AP98196 1134 aa8.15□□□□□ -1.1
RFC4-204ENST00000417876 SPRED3Q2MJR0 410 aa8.15□□□□□ -1.1
RFC4-204ENST00000417876 FOXR1Q6PIV2 292 aa8.15□□□□□ -1.1
RFC4-204ENST00000417876 NXPE3Q969Y0 559 aa8.15□□□□□ -1.1
RFC4-204ENST00000417876 OXCT2Q9BYC2 517 aaPredicted RBP8.15□□□□□ -1.1
RFC4-204ENST00000417876 RASSF4Q9H2L5 321 aa8.15□□□□□ -1.1
RFC4-204ENST00000417876 ACBD3Q9H3P7 528 aa8.15□□□□□ -1.1
RFC4-204ENST00000417876 SRA1Q9HD15 236 aaKnown RBP8.15□□□□□ -1.1
RFC4-204ENST00000417876 COPRSQ9NQ92 184 aa8.15□□□□□ -1.1
RFC4-204ENST00000417876 DDX41Q9UJV9 622 aaKnown RBP8.15□□□□□ -1.1
RFC4-204ENST00000417876 TRAK1Q9UPV9 953 aa8.15□□□□□ -1.1
RFC4-204ENST00000417876 BMP4P12644 408 aa8.14□□□□□ -1.11
RFC4-204ENST00000417876 TNNI2P48788 182 aa8.14□□□□□ -1.11
RFC4-204ENST00000417876 TRIM56Q9BRZ2 755 aaKnown RBP8.14□□□□□ -1.11
RFC4-204ENST00000417876 TGIF2Q9GZN2 237 aa8.14□□□□□ -1.11
RFC4-204ENST00000417876 TBC1D8BQ0IIM8 1120 aa8.13□□□□□ -1.11
RFC4-204ENST00000417876 ERMP1Q7Z2K6 904 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms