RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 ANKRD18BA2A2Z9 1011 aa10.04□□□□□ -0.8
MDC1-203ENST00000417033 APBB1O00213 710 aa10.04□□□□□ -0.8
MDC1-203ENST00000417033 KCNA3P22001 575 aa10.04□□□□□ -0.8
MDC1-203ENST00000417033 PDE6BP35913 854 aa10.04□□□□□ -0.8
MDC1-203ENST00000417033 IFIT5Q13325 482 aaKnown RBP10.04□□□□□ -0.8
MDC1-203ENST00000417033 HDAC1Q13547 482 aaPredicted RBP10.04□□□□□ -0.8
MDC1-203ENST00000417033 CCDC57Q2TAC2 916 aa10.04□□□□□ -0.8
MDC1-203ENST00000417033 OLFM4Q6UX06 510 aa10.04□□□□□ -0.8
MDC1-203ENST00000417033 SKAP1Q86WV1 359 aa10.04□□□□□ -0.8
MDC1-203ENST00000417033 RPGRQ92834 1020 aaKnown RBP10.04□□□□□ -0.8
MDC1-203ENST00000417033 PPP4R2Q9NY27 417 aa10.04□□□□□ -0.8
MDC1-203ENST00000417033 HDAC5Q9UQL6 1122 aa10.04□□□□□ -0.8
MDC1-203ENST00000417033 SPEF2Q9C093 1822 aa10.04□□□□□ -0.8
MDC1-203ENST00000417033 KDM2BQ8NHM5 1336 aa10.04□□□□□ -0.8
MDC1-203ENST00000417033 SURF6O75683 361 aaKnown RBP10.03□□□□□ -0.8
MDC1-203ENST00000417033 NPR1P16066 1061 aa10.03□□□□□ -0.8
MDC1-203ENST00000417033 HOXA10P31260 410 aaPredicted RBP10.03□□□□□ -0.8
MDC1-203ENST00000417033 GRAPQ13588 217 aa10.03□□□□□ -0.8
MDC1-203ENST00000417033 AAMPQ13685 434 aa10.03□□□□□ -0.8
MDC1-203ENST00000417033 DDX46Q7L014 1031 aaKnown RBP10.03□□□□□ -0.8
MDC1-203ENST00000417033 ATG9AQ7Z3C6 839 aa10.03□□□□□ -0.8
MDC1-203ENST00000417033 GRAPLQ8TC17 118 aaPredicted RBP10.03□□□□□ -0.8
MDC1-203ENST00000417033 ZNF622Q969S3 477 aaKnown RBP eCLIP10.03□□□□□ -0.81e-7■■□□□ 12.1
MDC1-203ENST00000417033 FHDC1Q9C0D6 1143 aaPredicted RBP10.03□□□□□ -0.8
MDC1-203ENST00000417033 COPRSQ9NQ92 184 aa10.03□□□□□ -0.8
MDC1-203ENST00000417033 WTIPA6NIX2 430 aaPredicted RBP10.02□□□□□ -0.81
MDC1-203ENST00000417033 SNAP23O00161 211 aa10.02□□□□□ -0.81
MDC1-203ENST00000417033 EYA2O00167 538 aa10.02□□□□□ -0.81
MDC1-203ENST00000417033 SMARCA5O60264 1052 aaPredicted RBP10.02□□□□□ -0.81
MDC1-203ENST00000417033 HMMRO75330 724 aa10.02□□□□□ -0.81
MDC1-203ENST00000417033 HSP90B1P14625 803 aaKnown RBP10.02□□□□□ -0.81
MDC1-203ENST00000417033 TAF7LQ5H9L4 462 aa10.02□□□□□ -0.81
MDC1-203ENST00000417033 ERICH6BQ5W0A0 696 aa10.02□□□□□ -0.81
MDC1-203ENST00000417033 ANKRD18AQ8IVF6 992 aa10.02□□□□□ -0.81
MDC1-203ENST00000417033 HELBQ8NG08 1087 aaPredicted RBP10.02□□□□□ -0.81
MDC1-203ENST00000417033 MASTLQ96GX5 879 aa10.02□□□□□ -0.81
MDC1-203ENST00000417033 RBM17Q96I25 401 aaKnown RBP10.02□□□□□ -0.81
MDC1-203ENST00000417033 CCDC136Q96JN2 1154 aa10.02□□□□□ -0.81
MDC1-203ENST00000417033 BCL11AQ9H165 835 aa10.02□□□□□ -0.81
MDC1-203ENST00000417033 DCTPP1Q9H773 170 aa10.02□□□□□ -0.81
MDC1-203ENST00000417033 DLEC1Q9Y238 1755 aa10.01□□□□□ -0.81
MDC1-203ENST00000417033 SLX4Q8IY92 1834 aa10.01□□□□□ -0.81
MDC1-203ENST00000417033 H0YIN7 160 aa10.01□□□□□ -0.81
MDC1-203ENST00000417033 SASH1O94885 1247 aa10.01□□□□□ -0.81
MDC1-203ENST00000417033 RPS8P62241 208 aaKnown RBP10.01□□□□□ -0.81
MDC1-203ENST00000417033 STYK1Q6J9G0 422 aa10.01□□□□□ -0.81
MDC1-203ENST00000417033 PRPF40BQ6NWY9 871 aaKnown RBP10.01□□□□□ -0.81
MDC1-203ENST00000417033 SMC5Q8IY18 1101 aa10.01□□□□□ -0.81
MDC1-203ENST00000417033 CRAMP1Q96RY5 1269 aa10.01□□□□□ -0.81
MDC1-203ENST00000417033 CDC5LQ99459 802 aaKnown RBP10.01□□□□□ -0.81
MDC1-203ENST00000417033 RWDD1Q9H446 243 aaPredicted RBP10.01□□□□□ -0.81
MDC1-203ENST00000417033 NOP58Q9Y2X3 529 aaKnown RBP10.01□□□□□ -0.81
MDC1-203ENST00000417033 RIPOR2Q9Y4F9 1068 aa10.01□□□□□ -0.81
MDC1-203ENST00000417033 CD2APQ9Y5K6 639 aa10.01□□□□□ -0.81
MDC1-203ENST00000417033 CACNA1SQ13698 1873 aa10.01□□□□□ -0.81
MDC1-203ENST00000417033 PPEF1O14829 653 aaPredicted RBP10□□□□□ -0.81
MDC1-203ENST00000417033 IGHMBP2P38935 993 aaKnown RBP10□□□□□ -0.81
MDC1-203ENST00000417033 TFCP2Q12800 502 aa10□□□□□ -0.81
MDC1-203ENST00000417033 OS9Q13438 667 aaPredicted RBP10□□□□□ -0.81
MDC1-203ENST00000417033 LDHAL6AQ6ZMR3 332 aa10□□□□□ -0.81
MDC1-203ENST00000417033 GPR101Q96P66 508 aaPredicted RBP10□□□□□ -0.81
MDC1-203ENST00000417033 IL1RAPL2Q9NP60 686 aa10□□□□□ -0.81
MDC1-203ENST00000417033 CNNM1Q9NRU3 951 aa10□□□□□ -0.81
MDC1-203ENST00000417033 TAF5LO75529 589 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 CIAO1O76071 339 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 KLRK1P26718 216 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 TGFB2P61812 414 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 GPSM2P81274 684 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 CHRNDQ07001 517 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 G3BP1Q13283 466 aaKnown RBP eCLIP9.99□□□□□ -0.81
MDC1-203ENST00000417033 VGLL2Q8N8G2 317 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 RHPN1Q8TCX5 695 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 OTUD7AQ8TE49 926 aaPredicted RBP9.99□□□□□ -0.81
MDC1-203ENST00000417033 C7orf43Q8WVR3 580 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 MPHOSPH8Q99549 860 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 SYT17Q9BSW7 474 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 BSDC1Q9NW68 430 aaPredicted RBP9.99□□□□□ -0.81
MDC1-203ENST00000417033 MINPP1Q9UNW1 487 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 PDZRN3Q9UPQ7 1066 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 LRRC37AA6NMS7 1700 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 SNED1Q8TER0 1413 aa9.99□□□□□ -0.81
MDC1-203ENST00000417033 A0A1B0GUL6 1792 aa9.98□□□□□ -0.81
MDC1-203ENST00000417033 BRCA1P38398 1863 aaKnown RBP9.98□□□□□ -0.81
MDC1-203ENST00000417033 DUOX1Q9NRD9 1551 aa9.98□□□□□ -0.81
MDC1-203ENST00000417033 CHRM1P11229 460 aaPredicted RBP9.98□□□□□ -0.81
MDC1-203ENST00000417033 IL15P40933 162 aaPredicted RBP9.98□□□□□ -0.81
MDC1-203ENST00000417033 METTL24Q5JXM2 366 aa9.98□□□□□ -0.81
MDC1-203ENST00000417033 ANKRD45Q5TZF3 282 aa9.98□□□□□ -0.81
MDC1-203ENST00000417033 C16orf71Q8IYS4 520 aaPredicted RBP9.98□□□□□ -0.81
MDC1-203ENST00000417033 TTLL6Q8N841 843 aa9.98□□□□□ -0.81
MDC1-203ENST00000417033 CNKSR1Q969H4 720 aa9.98□□□□□ -0.81
MDC1-203ENST00000417033 LNPKQ9C0E8 428 aa9.98□□□□□ -0.81
MDC1-203ENST00000417033 TSPYL2Q9H2G4 693 aaPredicted RBP9.98□□□□□ -0.81
MDC1-203ENST00000417033 TLR7Q9NYK1 1049 aaKnown RBP9.98□□□□□ -0.81
MDC1-203ENST00000417033 ZNF609O15014 1411 aa9.98□□□□□ -0.81
MDC1-203ENST00000417033 LTBP1Q14766 1721 aa9.97□□□□□ -0.81
MDC1-203ENST00000417033 C21orf2O43822 256 aa9.97□□□□□ -0.81
MDC1-203ENST00000417033 BBOX1O75936 387 aa9.97□□□□□ -0.81
MDC1-203ENST00000417033 PDE4AP27815 886 aa9.97□□□□□ -0.81
MDC1-203ENST00000417033 ADORA1P30542 326 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms