RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ZNF157P51786 506 aaPredicted RBP13.04□□□□□ -0.32
MDC1-202ENST00000416571 GPSM2P81274 684 aa13.04□□□□□ -0.32
MDC1-202ENST00000416571 KIF4BQ2VIQ3 1234 aa13.04□□□□□ -0.32
MDC1-202ENST00000416571 DLK2Q6UY11 383 aa13.04□□□□□ -0.32
MDC1-202ENST00000416571 SULF1Q8IWU6 871 aa13.04□□□□□ -0.32
MDC1-202ENST00000416571 CCDC146Q8IYE0 955 aa13.04□□□□□ -0.32
MDC1-202ENST00000416571 ZIC5Q96T25 663 aa13.04□□□□□ -0.32
MDC1-202ENST00000416571 ISCA1Q9BUE6 129 aa13.04□□□□□ -0.32
MDC1-202ENST00000416571 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
MDC1-202ENST00000416571 POLLQ9UGP5 575 aa13.04□□□□□ -0.32
MDC1-202ENST00000416571 IRS4O14654 1257 aaPredicted RBP13.03□□□□□ -0.32
MDC1-202ENST00000416571 HSP90B1P14625 803 aaKnown RBP13.03□□□□□ -0.32
MDC1-202ENST00000416571 RPS8P62241 208 aaKnown RBP13.03□□□□□ -0.32
MDC1-202ENST00000416571 KIF23Q02241 960 aaPredicted RBP13.03□□□□□ -0.32
MDC1-202ENST00000416571 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
MDC1-202ENST00000416571 TBC1D16Q8TBP0 767 aa13.03□□□□□ -0.32
MDC1-202ENST00000416571 SAGE1Q9NXZ1 904 aa13.03□□□□□ -0.32
MDC1-202ENST00000416571 GGA3Q9NZ52 723 aa13.03□□□□□ -0.32
MDC1-202ENST00000416571 ANKIB1Q9P2G1 1089 aa13.03□□□□□ -0.32
MDC1-202ENST00000416571 RTL9Q8NET4 1388 aa13.03□□□□□ -0.32
MDC1-202ENST00000416571 EGFRP00533 1210 aa13.02□□□□□ -0.33
MDC1-202ENST00000416571 RIC3Q7Z5B4 369 aa13.02□□□□□ -0.33
MDC1-202ENST00000416571 RUNDC1Q96C34 613 aa13.02□□□□□ -0.33
MDC1-202ENST00000416571 KCNQ5Q9NR82 932 aa13.02□□□□□ -0.33
MDC1-202ENST00000416571 FAM155AB1AL88 458 aaPredicted RBP13.01□□□□□ -0.33
MDC1-202ENST00000416571 TRPA1O75762 1119 aa13.01□□□□□ -0.33
MDC1-202ENST00000416571 UFL1O94874 794 aa13.01□□□□□ -0.33
MDC1-202ENST00000416571 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
MDC1-202ENST00000416571 SCN9AQ15858 1988 aa13□□□□□ -0.33
MDC1-202ENST00000416571 COL4A1P02462 1669 aa13□□□□□ -0.33
MDC1-202ENST00000416571 VIL1P09327 827 aaKnown RBP13□□□□□ -0.33
MDC1-202ENST00000416571 TRIM28Q13263 835 aaKnown RBP13□□□□□ -0.33
MDC1-202ENST00000416571 DUSP27Q5VZP5 1158 aa13□□□□□ -0.33
MDC1-202ENST00000416571 ZBTB38Q8NAP3 1195 aaPredicted RBP13□□□□□ -0.33
MDC1-202ENST00000416571 CDCA5Q96FF9 252 aa13□□□□□ -0.33
MDC1-202ENST00000416571 RNF186Q9NXI6 227 aa13□□□□□ -0.33
MDC1-202ENST00000416571 PODXL2Q9NZ53 605 aa13□□□□□ -0.33
MDC1-202ENST00000416571 GGA1Q9UJY5 639 aa13□□□□□ -0.33
MDC1-202ENST00000416571 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
MDC1-202ENST00000416571 MYBBP1AQ9BQG0 1328 aaKnown RBP12.99□□□□□ -0.33
MDC1-202ENST00000416571 SLC10A3P09131 477 aa12.99□□□□□ -0.33
MDC1-202ENST00000416571 CCDC152Q4G0S7 254 aa12.99□□□□□ -0.33
MDC1-202ENST00000416571 ANGEL2Q5VTE6 544 aaKnown RBP12.99□□□□□ -0.33
MDC1-202ENST00000416571 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
MDC1-202ENST00000416571 SEC31BQ9NQW1 1179 aa12.99□□□□□ -0.33
MDC1-202ENST00000416571 PSME4Q14997 1843 aa12.98□□□□□ -0.33
MDC1-202ENST00000416571 RSBN1LQ6PCB5 846 aaPredicted RBP12.98□□□□□ -0.33
MDC1-202ENST00000416571 AGBL3Q8NEM8 1001 aa12.98□□□□□ -0.33
MDC1-202ENST00000416571 MYD88Q99836 296 aa12.98□□□□□ -0.33
MDC1-202ENST00000416571 PAPPA2Q9BXP8 1791 aa12.97□□□□□ -0.33
MDC1-202ENST00000416571 ASTN2O75129 1339 aaPredicted RBP12.97□□□□□ -0.33
MDC1-202ENST00000416571 XDHP47989 1333 aa12.97□□□□□ -0.33
MDC1-202ENST00000416571 SOX10P56693 466 aa12.97□□□□□ -0.33
MDC1-202ENST00000416571 FKBP1BP68106 108 aa12.97□□□□□ -0.33
MDC1-202ENST00000416571 SCARF1Q14162 830 aa12.97□□□□□ -0.33
MDC1-202ENST00000416571 CCDC85AQ96PX6 553 aaPredicted RBP12.97□□□□□ -0.33
MDC1-202ENST00000416571 CSRNP1Q96S65 589 aa12.97□□□□□ -0.33
MDC1-202ENST00000416571 ZNF609O15014 1411 aa12.96□□□□□ -0.33
MDC1-202ENST00000416571 PDE8AO60658 829 aa12.96□□□□□ -0.33
MDC1-202ENST00000416571 DDX58O95786 925 aaKnown RBP12.96□□□□□ -0.33
MDC1-202ENST00000416571 PCCAP05165 728 aaPredicted RBP12.96□□□□□ -0.33
MDC1-202ENST00000416571 USP17L8P0C7I0 530 aa12.96□□□□□ -0.33
MDC1-202ENST00000416571 ZNF280AP59817 542 aaPredicted RBP12.96□□□□□ -0.33
MDC1-202ENST00000416571 CTU1Q7Z7A3 348 aaKnown RBP12.96□□□□□ -0.33
MDC1-202ENST00000416571 RASAL3Q86YV0 1011 aa12.96□□□□□ -0.33
MDC1-202ENST00000416571 ANKRD18AQ8IVF6 992 aa12.96□□□□□ -0.33
MDC1-202ENST00000416571 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
MDC1-202ENST00000416571 PHAXQ9H814 394 aaKnown RBP12.96□□□□□ -0.33
MDC1-202ENST00000416571 MYOZ2Q9NPC6 264 aa12.96□□□□□ -0.33
MDC1-202ENST00000416571 MBIPQ9NS73 344 aa12.96□□□□□ -0.33
MDC1-202ENST00000416571 CWC25Q9NXE8 425 aaPredicted RBP12.96□□□□□ -0.33
MDC1-202ENST00000416571 PITPNM2Q9BZ72 1349 aa12.95□□□□□ -0.34
MDC1-202ENST00000416571 USP17L3A6NCW0 530 aa12.95□□□□□ -0.34
MDC1-202ENST00000416571 USP17L4A6NCW7 530 aa12.95□□□□□ -0.34
MDC1-202ENST00000416571 ATP2B4P23634 1241 aa12.95□□□□□ -0.34
MDC1-202ENST00000416571 CALD1Q05682 793 aaKnown RBP12.95□□□□□ -0.34
MDC1-202ENST00000416571 TTLL12Q14166 644 aaPredicted RBP12.95□□□□□ -0.34
MDC1-202ENST00000416571 USP17L1Q7RTZ2 530 aa12.95□□□□□ -0.34
MDC1-202ENST00000416571 PODNQ7Z5L7 613 aa12.95□□□□□ -0.34
MDC1-202ENST00000416571 HDAC9Q9UKV0 1011 aa12.95□□□□□ -0.34
MDC1-202ENST00000416571 ELL2O00472 640 aaPredicted RBP12.94□□□□□ -0.34
MDC1-202ENST00000416571 DLL1O00548 723 aa12.94□□□□□ -0.34
MDC1-202ENST00000416571 GNAI1P63096 354 aa12.94□□□□□ -0.34
MDC1-202ENST00000416571 CDC5LQ99459 802 aaKnown RBP12.94□□□□□ -0.34
MDC1-202ENST00000416571 CHMP4AQ9BY43 222 aa12.94□□□□□ -0.34
MDC1-202ENST00000416571 ADAMTS8Q9UP79 889 aa12.94□□□□□ -0.34
MDC1-202ENST00000416571 SPEF2Q9C093 1822 aa12.94□□□□□ -0.34
MDC1-202ENST00000416571 NF2P35240 595 aa12.93□□□□□ -0.34
MDC1-202ENST00000416571 OGFOD1Q8N543 542 aa12.93□□□□□ -0.34
MDC1-202ENST00000416571 JARID2Q92833 1246 aaPredicted RBP12.93□□□□□ -0.34
MDC1-202ENST00000416571 FBXW7Q969H0 707 aa12.93□□□□□ -0.34
MDC1-202ENST00000416571 METTL22Q9BUU2 404 aaPredicted RBP12.93□□□□□ -0.34
MDC1-202ENST00000416571 IFT57Q9NWB7 429 aa12.93□□□□□ -0.34
MDC1-202ENST00000416571 MYH3P11055 1940 aa12.93□□□□□ -0.34
MDC1-202ENST00000416571 DDX10Q13206 875 aaKnown RBP12.92□□□□□ -0.34
MDC1-202ENST00000416571 PKN2Q16513 984 aaKnown RBP12.92□□□□□ -0.34
MDC1-202ENST00000416571 GMLQ99445 158 aa12.92□□□□□ -0.34
MDC1-202ENST00000416571 MED23Q9ULK4 1368 aa12.92□□□□□ -0.34
MDC1-202ENST00000416571 MYO3BQ8WXR4 1341 aa12.91□□□□□ -0.34
MDC1-202ENST00000416571 UBE2Q2LH0YL09 131 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms