RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 PDZRN3Q9UPQ7 1066 aa9.8□□□□□ -0.84
RBM39-209ENST00000416529 HDAC5Q9UQL6 1122 aa9.8□□□□□ -0.84
RBM39-209ENST00000416529 SALL2Q9Y467 1007 aaPredicted RBP9.8□□□□□ -0.84
RBM39-209ENST00000416529 COL15A1P39059 1388 aa9.79□□□□□ -0.84
RBM39-209ENST00000416529 TULP1O00294 542 aaPredicted RBP9.79□□□□□ -0.84
RBM39-209ENST00000416529 RFC4P35249 363 aa9.79□□□□□ -0.84
RBM39-209ENST00000416529 TRIM28Q13263 835 aaKnown RBP9.79□□□□□ -0.84
RBM39-209ENST00000416529 KIF6Q6ZMV9 814 aa9.79□□□□□ -0.84
RBM39-209ENST00000416529 PLBD2Q8NHP8 589 aa9.79□□□□□ -0.84
RBM39-209ENST00000416529 CHD4Q14839 1912 aa9.78□□□□□ -0.84
RBM39-209ENST00000416529 NR1I2O75469 434 aa9.78□□□□□ -0.84
RBM39-209ENST00000416529 PARP10Q53GL7 1025 aa9.78□□□□□ -0.84
RBM39-209ENST00000416529 METTL3Q86U44 580 aaKnown RBP9.78□□□□□ -0.84
RBM39-209ENST00000416529 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.78□□□□□ -0.84
RBM39-209ENST00000416529 TSR2Q969E8 191 aaKnown RBP9.78□□□□□ -0.84
RBM39-209ENST00000416529 SYT17Q9BSW7 474 aa9.78□□□□□ -0.84
RBM39-209ENST00000416529 MTFR1LQ9H019 292 aa9.78□□□□□ -0.84
RBM39-209ENST00000416529 CHMP4BQ9H444 224 aaKnown RBP9.78□□□□□ -0.84
RBM39-209ENST00000416529 ZBTB1Q9Y2K1 713 aa9.78□□□□□ -0.84
RBM39-209ENST00000416529 USP42Q9H9J4 1324 aaKnown RBP9.78□□□□□ -0.84
RBM39-209ENST00000416529 ATP10DQ9P241 1426 aa9.77□□□□□ -0.85
RBM39-209ENST00000416529 A1BGP04217 495 aa9.77□□□□□ -0.85
RBM39-209ENST00000416529 EIF2S2P20042 333 aaKnown RBP9.77□□□□□ -0.85
RBM39-209ENST00000416529 RBM26Q5T8P6 1007 aaKnown RBP9.77□□□□□ -0.85
RBM39-209ENST00000416529 NBPF10Q6P3W6 841 aaKnown RBP9.77□□□□□ -0.85
RBM39-209ENST00000416529 BLOC1S3Q6QNY0 202 aa9.77□□□□□ -0.85
RBM39-209ENST00000416529 GIGYF2Q6Y7W6 1299 aaKnown RBP9.77□□□□□ -0.85
RBM39-209ENST00000416529 LRP10Q7Z4F1 713 aa9.77□□□□□ -0.85
RBM39-209ENST00000416529 DZIP3Q86Y13 1208 aaKnown RBP9.77□□□□□ -0.85
RBM39-209ENST00000416529 NBPF15Q8N660 670 aa9.77□□□□□ -0.85
RBM39-209ENST00000416529 NKX2-3Q8TAU0 364 aa9.77□□□□□ -0.85
RBM39-209ENST00000416529 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.85
RBM39-209ENST00000416529 MAP3K15Q6ZN16 1313 aa9.77□□□□□ -0.85
RBM39-209ENST00000416529 PNPLA7Q6ZV29 1317 aa9.77□□□□□ -0.85
RBM39-209ENST00000416529 COL24A1Q17RW2 1714 aa9.76□□□□□ -0.85
RBM39-209ENST00000416529 CASZ1Q86V15 1759 aa9.76□□□□□ -0.85
RBM39-209ENST00000416529 GFRA3O60609 400 aa9.76□□□□□ -0.85
RBM39-209ENST00000416529 RARSP54136 660 aaKnown RBP9.76□□□□□ -0.85
RBM39-209ENST00000416529 NEXNQ0ZGT2 675 aa9.76□□□□□ -0.85
RBM39-209ENST00000416529 FAM161AQ3B820 660 aa9.76□□□□□ -0.85
RBM39-209ENST00000416529 KSR2Q6VAB6 950 aa9.76□□□□□ -0.85
RBM39-209ENST00000416529 TSPYL6Q8N831 410 aa9.76□□□□□ -0.85
RBM39-209ENST00000416529 PXDNLA1KZ92 1463 aa9.75□□□□□ -0.85
RBM39-209ENST00000416529 NRG2O14511 850 aaPredicted RBP9.75□□□□□ -0.85
RBM39-209ENST00000416529 CANXP27824 592 aaKnown RBP9.75□□□□□ -0.85
RBM39-209ENST00000416529 POLD1P28340 1107 aa9.75□□□□□ -0.85
RBM39-209ENST00000416529 FLIIQ13045 1269 aa9.75□□□□□ -0.85
RBM39-209ENST00000416529 ZNF827Q17R98 1081 aa9.75□□□□□ -0.85
RBM39-209ENST00000416529 COL23A1Q86Y22 540 aaPredicted RBP9.75□□□□□ -0.85
RBM39-209ENST00000416529 ARXQ96QS3 562 aa9.75□□□□□ -0.85
RBM39-209ENST00000416529 NYXQ9GZU5 481 aa9.75□□□□□ -0.85
RBM39-209ENST00000416529 CHPF2Q9P2E5 772 aa9.75□□□□□ -0.85
RBM39-209ENST00000416529 ALDH1L1O75891 902 aa9.74□□□□□ -0.85
RBM39-209ENST00000416529 CAMTA2O94983 1202 aa9.74□□□□□ -0.85
RBM39-209ENST00000416529 TCIRG1Q13488 830 aa9.74□□□□□ -0.85
RBM39-209ENST00000416529 AAMPQ13685 434 aa9.74□□□□□ -0.85
RBM39-209ENST00000416529 COPS6Q7L5N1 327 aa9.74□□□□□ -0.85
RBM39-209ENST00000416529 CCDC191Q8NCU4 936 aa9.74□□□□□ -0.85
RBM39-209ENST00000416529 SMC4Q9NTJ3 1288 aa9.74□□□□□ -0.85
RBM39-209ENST00000416529 RIC1Q4ADV7 1423 aa9.73□□□□□ -0.85
RBM39-209ENST00000416529 ELL2O00472 640 aaPredicted RBP9.73□□□□□ -0.85
RBM39-209ENST00000416529 GYS1P13807 737 aa9.73□□□□□ -0.85
RBM39-209ENST00000416529 TM4SF1P30408 202 aa9.73□□□□□ -0.85
RBM39-209ENST00000416529 TPTE2Q6XPS3 522 aa9.73□□□□□ -0.85
RBM39-209ENST00000416529 PPP1R42Q7Z4L9 355 aa9.73□□□□□ -0.85
RBM39-209ENST00000416529 GPIHBP1Q8IV16 184 aa9.73□□□□□ -0.85
RBM39-209ENST00000416529 SULF1Q8IWU6 871 aa9.73□□□□□ -0.85
RBM39-209ENST00000416529 SSH1Q8WYL5 1049 aa9.73□□□□□ -0.85
RBM39-209ENST00000416529 SETDB2Q96T68 719 aa9.73□□□□□ -0.85
RBM39-209ENST00000416529 METTL22Q9BUU2 404 aaPredicted RBP9.73□□□□□ -0.85
RBM39-209ENST00000416529 DAXXQ9UER7 740 aaPredicted RBP9.73□□□□□ -0.85
RBM39-209ENST00000416529 SCN7AQ01118 1682 aa9.73□□□□□ -0.85
RBM39-209ENST00000416529 CARMIL3Q8ND23 1372 aa9.73□□□□□ -0.85
RBM39-209ENST00000416529 BCORQ6W2J9 1755 aa9.73□□□□□ -0.85
RBM39-209ENST00000416529 PRAMEF22A3QJZ6 481 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 SLC10A3P09131 477 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 CCT4P50991 539 aaKnown RBP9.72□□□□□ -0.85
RBM39-209ENST00000416529 FKBP5Q13451 457 aaPredicted RBP9.72□□□□□ -0.85
RBM39-209ENST00000416529 PDE3AQ14432 1141 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 KRT24Q2M2I5 525 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 RIC3Q7Z5B4 369 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 ZNF34Q8IZ26 560 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 LINS1Q8NG48 757 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 XAGE3Q8WTP9 111 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 DNAAF4Q8WXU2 420 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 RCAN3Q9UKA8 241 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 C4AP0C0L4 1744 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 NUP98P52948 1817 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 TUBGCP6Q96RT7 1819 aa9.72□□□□□ -0.85
RBM39-209ENST00000416529 ADH1BP00325 375 aa9.71□□□□□ -0.86
RBM39-209ENST00000416529 MYL6BP14649 208 aa9.71□□□□□ -0.86
RBM39-209ENST00000416529 ZKSCAN2Q63HK3 967 aa9.71□□□□□ -0.86
RBM39-209ENST00000416529 ATF7IPQ6VMQ6 1270 aa9.71□□□□□ -0.86
RBM39-209ENST00000416529 ANKLE1Q8NAG6 615 aa9.71□□□□□ -0.86
RBM39-209ENST00000416529 ZNF526Q8TF50 670 aaPredicted RBP9.71□□□□□ -0.86
RBM39-209ENST00000416529 ISCA1Q9BUE6 129 aa9.71□□□□□ -0.86
RBM39-209ENST00000416529 PARP3Q9Y6F1 533 aa9.71□□□□□ -0.86
RBM39-209ENST00000416529 UTRNP46939 3433 aa9.7□□□□□ -0.86
RBM39-209ENST00000416529 CENPBP07199 599 aaPredicted RBP9.7□□□□□ -0.86
RBM39-209ENST00000416529 KCNQ4P56696 695 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms