RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 ATG9AQ7Z3C6 839 aa12.44□□□□□ -0.42
DEPDC4-203ENST00000416321 ANKRD18AQ8IVF6 992 aa12.44□□□□□ -0.42
DEPDC4-203ENST00000416321 NEUROD6Q96NK8 337 aa12.44□□□□□ -0.42
DEPDC4-203ENST00000416321 BACH2Q9BYV9 841 aa12.44□□□□□ -0.42
DEPDC4-203ENST00000416321 CCDC8Q9H0W5 538 aaPredicted RBP12.44□□□□□ -0.42
DEPDC4-203ENST00000416321 ANO8Q9HCE9 1232 aaPredicted RBP12.44□□□□□ -0.42
DEPDC4-203ENST00000416321 GPR108Q9NPR9 543 aa12.44□□□□□ -0.42
DEPDC4-203ENST00000416321 ECHDC1Q9NTX5 307 aa12.44□□□□□ -0.42
DEPDC4-203ENST00000416321 STAP2Q9UGK3 403 aa12.44□□□□□ -0.42
DEPDC4-203ENST00000416321 QSER1Q2KHR3 1735 aa12.44□□□□□ -0.42
DEPDC4-203ENST00000416321 MROH5Q6ZUA9 1318 aa12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 SALL3Q9BXA9 1300 aa12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 TRIM6-TRIM34B2RNG4 842 aa12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 POLRMTO00411 1230 aaKnown RBP12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 GLRX3O76003 335 aaKnown RBP12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 PRR5LQ6MZQ0 368 aa12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 DDX46Q7L014 1031 aaKnown RBP12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 RPGRQ92834 1020 aaKnown RBP12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 EAF2Q96CJ1 260 aaPredicted RBP12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 PUS3Q9BZE2 481 aaKnown RBP12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 SEC31BQ9NQW1 1179 aa12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 RIC1Q4ADV7 1423 aa12.43□□□□□ -0.42
DEPDC4-203ENST00000416321 CDC45O75419 566 aa12.42□□□□□ -0.42
DEPDC4-203ENST00000416321 DDR1Q08345 913 aa12.42□□□□□ -0.42
DEPDC4-203ENST00000416321 C8orf34Q49A92 452 aa12.42□□□□□ -0.42
DEPDC4-203ENST00000416321 GORABQ5T7V8 394 aa12.42□□□□□ -0.42
DEPDC4-203ENST00000416321 TSHZ3Q63HK5 1081 aa12.42□□□□□ -0.42
DEPDC4-203ENST00000416321 UPF2Q9HAU5 1272 aaKnown RBP12.42□□□□□ -0.42
DEPDC4-203ENST00000416321 TSHZ2Q9NRE2 1034 aa12.42□□□□□ -0.42
DEPDC4-203ENST00000416321 CASZ1Q86V15 1759 aa12.42□□□□□ -0.42
DEPDC4-203ENST00000416321 SPEF2Q9C093 1822 aa12.41□□□□□ -0.42
DEPDC4-203ENST00000416321 LRP5O75197 1615 aa12.41□□□□□ -0.42
DEPDC4-203ENST00000416321 ZNF609O15014 1411 aa12.41□□□□□ -0.42
DEPDC4-203ENST00000416321 MMP10P09238 476 aa12.41□□□□□ -0.42
DEPDC4-203ENST00000416321 GSPT1P15170 499 aaKnown RBP12.41□□□□□ -0.42
DEPDC4-203ENST00000416321 MSL1Q68DK7 614 aa12.41□□□□□ -0.42
DEPDC4-203ENST00000416321 C3orf67Q6ZVT6 689 aa12.41□□□□□ -0.42
DEPDC4-203ENST00000416321 CNTROBQ8N137 903 aa12.41□□□□□ -0.42
DEPDC4-203ENST00000416321 RILPL2Q969X0 211 aa12.41□□□□□ -0.42
DEPDC4-203ENST00000416321 RIPOR2Q9Y4F9 1068 aa12.41□□□□□ -0.42
DEPDC4-203ENST00000416321 A0A1B0GUL7 405 aa12.4□□□□□ -0.42
DEPDC4-203ENST00000416321 SDSP20132 328 aa12.4□□□□□ -0.42
DEPDC4-203ENST00000416321 PUM3Q15397 648 aaKnown RBP12.4□□□□□ -0.42
DEPDC4-203ENST00000416321 ATP2B3Q16720 1220 aa12.4□□□□□ -0.42
DEPDC4-203ENST00000416321 CCDC158Q5M9N0 1113 aa12.4□□□□□ -0.42
DEPDC4-203ENST00000416321 RBM17Q96I25 401 aaKnown RBP12.4□□□□□ -0.42
DEPDC4-203ENST00000416321 TNRC6CQ9HCJ0 1690 aaKnown RBP12.39□□□□□ -0.43
DEPDC4-203ENST00000416321 PDE8BO95263 885 aa12.39□□□□□ -0.43
DEPDC4-203ENST00000416321 SLC5A1P13866 664 aa12.39□□□□□ -0.43
DEPDC4-203ENST00000416321 RPS8P62241 208 aaKnown RBP12.39□□□□□ -0.43
DEPDC4-203ENST00000416321 PI4K2BQ8TCG2 481 aa12.39□□□□□ -0.43
DEPDC4-203ENST00000416321 DBNDD2Q9BQY9 259 aa12.39□□□□□ -0.43
DEPDC4-203ENST00000416321 BSDC1Q9NW68 430 aaPredicted RBP12.39□□□□□ -0.43
DEPDC4-203ENST00000416321 TLR7Q9NYK1 1049 aaKnown RBP12.39□□□□□ -0.43
DEPDC4-203ENST00000416321 DBNLQ9UJU6 430 aaKnown RBP12.39□□□□□ -0.43
DEPDC4-203ENST00000416321 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.39□□□□□ -0.43
DEPDC4-203ENST00000416321 IFIT1P09914 478 aaKnown RBP12.38□□□□□ -0.43
DEPDC4-203ENST00000416321 PDE6BP35913 854 aa12.38□□□□□ -0.43
DEPDC4-203ENST00000416321 KCNJ4P48050 445 aa12.38□□□□□ -0.43
DEPDC4-203ENST00000416321 TIMM10P62072 90 aa12.38□□□□□ -0.43
DEPDC4-203ENST00000416321 GRAPQ13588 217 aa12.38□□□□□ -0.43
DEPDC4-203ENST00000416321 TTC39AQ5SRH9 613 aa12.38□□□□□ -0.43
DEPDC4-203ENST00000416321 GRAPLQ8TC17 118 aaPredicted RBP12.38□□□□□ -0.43
DEPDC4-203ENST00000416321 SLC16A10Q8TF71 515 aa12.38□□□□□ -0.43
DEPDC4-203ENST00000416321 LPIN2Q92539 896 aa12.38□□□□□ -0.43
DEPDC4-203ENST00000416321 CELF1Q92879 486 aaKnown RBP12.38□□□□□ -0.43
DEPDC4-203ENST00000416321 BRIP1Q9BX63 1249 aa12.38□□□□□ -0.43
DEPDC4-203ENST00000416321 AK9Q5TCS8 1911 aa12.37□□□□□ -0.43
DEPDC4-203ENST00000416321 PITPNM1O00562 1244 aa12.37□□□□□ -0.43
DEPDC4-203ENST00000416321 MAP4K4O95819 1239 aaPredicted RBP12.37□□□□□ -0.43
DEPDC4-203ENST00000416321 ATP5JP18859 108 aa12.37□□□□□ -0.43
DEPDC4-203ENST00000416321 CHRNDQ07001 517 aa12.37□□□□□ -0.43
DEPDC4-203ENST00000416321 HELBQ8NG08 1087 aaPredicted RBP12.37□□□□□ -0.43
DEPDC4-203ENST00000416321 XAGE2Q96GT9 111 aa12.37□□□□□ -0.43
DEPDC4-203ENST00000416321 ANKRD2Q9GZV1 360 aa12.37□□□□□ -0.43
DEPDC4-203ENST00000416321 BOLA2Q9H3K6 86 aa12.37□□□□□ -0.43
DEPDC4-203ENST00000416321 NRXN2Q9P2S2 1712 aa12.37□□□□□ -0.43
DEPDC4-203ENST00000416321 CRY2Q49AN0 593 aa12.36□□□□□ -0.43
DEPDC4-203ENST00000416321 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
DEPDC4-203ENST00000416321 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
DEPDC4-203ENST00000416321 EVI5LQ96CN4 794 aa12.36□□□□□ -0.43
DEPDC4-203ENST00000416321 DNAJC2Q99543 621 aaKnown RBP12.36□□□□□ -0.43
DEPDC4-203ENST00000416321 TMX4Q9H1E5 349 aaPredicted RBP12.36□□□□□ -0.43
DEPDC4-203ENST00000416321 HIP1O00291 1037 aa12.35□□□□□ -0.43
DEPDC4-203ENST00000416321 TAF5LO75529 589 aa12.35□□□□□ -0.43
DEPDC4-203ENST00000416321 MFAP1P55081 439 aaKnown RBP12.35□□□□□ -0.43
DEPDC4-203ENST00000416321 TMC4Q7Z404 712 aa12.35□□□□□ -0.43
DEPDC4-203ENST00000416321 VGLL2Q8N8G2 317 aa12.35□□□□□ -0.43
DEPDC4-203ENST00000416321 CRAMP1Q96RY5 1269 aa12.35□□□□□ -0.43
DEPDC4-203ENST00000416321 FSD1Q9BTV5 496 aa12.35□□□□□ -0.43
DEPDC4-203ENST00000416321 RBM19Q9Y4C8 960 aaKnown RBP12.35□□□□□ -0.43
DEPDC4-203ENST00000416321 TAF1P21675 1872 aa12.34□□□□□ -0.43
DEPDC4-203ENST00000416321 BBOX1O75936 387 aa12.34□□□□□ -0.43
DEPDC4-203ENST00000416321 UQCRFS1P1P0C7P4 283 aa12.34□□□□□ -0.43
DEPDC4-203ENST00000416321 NPR1P16066 1061 aa12.34□□□□□ -0.43
DEPDC4-203ENST00000416321 ADORA1P30542 326 aa12.34□□□□□ -0.43
DEPDC4-203ENST00000416321 UBE4AQ14139 1066 aa12.34□□□□□ -0.43
DEPDC4-203ENST00000416321 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.34□□□□□ -0.43
DEPDC4-203ENST00000416321 HAUS7Q99871 368 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms