RNA–Protein interactions for RNA: ENST00000416118.1

CHEK2P3-201, Transcript of checkpoint kinase 2 pseudogene 3, humanhuman

BASIC

Gene CHEK2P3, Length 248 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2P3-201ENST00000416118 PLSCR1O15162 318 aa6.93□□□□□ -1.3
CHEK2P3-201ENST00000416118 HSPA5P11021 654 aaKnown RBP6.93□□□□□ -1.3
CHEK2P3-201ENST00000416118 EIF4G2P78344 907 aaKnown RBP eCLIP6.93□□□□□ -1.3
CHEK2P3-201ENST00000416118 NR1H3Q13133 447 aa6.93□□□□□ -1.3
CHEK2P3-201ENST00000416118 TREML4Q6UXN2 200 aa6.93□□□□□ -1.3
CHEK2P3-201ENST00000416118 DDX54Q8TDD1 881 aaKnown RBP6.93□□□□□ -1.3
CHEK2P3-201ENST00000416118 LRRC37A3O60309 1634 aa6.93□□□□□ -1.3
CHEK2P3-201ENST00000416118 RGPD1P0DJD0 1748 aa6.93□□□□□ -1.3
CHEK2P3-201ENST00000416118 PARP4Q9UKK3 1724 aaKnown RBP6.93□□□□□ -1.3
CHEK2P3-201ENST00000416118 MCCD1P59942 119 aaPredicted RBP6.92□□□□□ -1.3
CHEK2P3-201ENST00000416118 NFX1Q12986 1120 aaKnown RBP6.92□□□□□ -1.3
CHEK2P3-201ENST00000416118 TXNRD1Q16881 649 aa6.92□□□□□ -1.3
CHEK2P3-201ENST00000416118 HSP90AB2PQ58FF8 381 aa6.92□□□□□ -1.3
CHEK2P3-201ENST00000416118 NBPF6Q5VWK0 638 aa6.92□□□□□ -1.3
CHEK2P3-201ENST00000416118 LINC00528Q8N1L1 170 aa6.92□□□□□ -1.3
CHEK2P3-201ENST00000416118 USHBP1Q8N6Y0 703 aa6.92□□□□□ -1.3
CHEK2P3-201ENST00000416118 NBPF4Q96M43 638 aa6.92□□□□□ -1.3
CHEK2P3-201ENST00000416118 TNS1Q9HBL0 1735 aaKnown RBP6.92□□□□□ -1.3
CHEK2P3-201ENST00000416118 USP54Q70EL1 1684 aa6.91□□□□□ -1.3
CHEK2P3-201ENST00000416118 SRCAPQ6ZRS2 3230 aa6.91□□□□□ -1.3
CHEK2P3-201ENST00000416118 PPM1GO15355 546 aaPredicted RBP6.91□□□□□ -1.3
CHEK2P3-201ENST00000416118 TSEN34Q9BSV6 310 aaKnown RBP6.91□□□□□ -1.3
CHEK2P3-201ENST00000416118 RTL1A6NKG5 1358 aa6.91□□□□□ -1.3
CHEK2P3-201ENST00000416118 PEAK1Q9H792 1746 aa6.9□□□□□ -1.3
CHEK2P3-201ENST00000416118 ERVH48-1M5A8F1 160 aa6.9□□□□□ -1.3
CHEK2P3-201ENST00000416118 ZCRB1Q8TBF4 217 aaKnown RBP6.9□□□□□ -1.3
CHEK2P3-201ENST00000416118 PANK3Q9H999 370 aa6.9□□□□□ -1.3
CHEK2P3-201ENST00000416118 STK32BQ9NY57 414 aa6.9□□□□□ -1.3
CHEK2P3-201ENST00000416118 CGNL1Q0VF96 1302 aa6.9□□□□□ -1.3
CHEK2P3-201ENST00000416118 INSRP06213 1382 aa6.9□□□□□ -1.31
CHEK2P3-201ENST00000416118 TERTO14746 1132 aaKnown RBP6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 UPP2O95045 317 aa6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 TATP17735 454 aaPredicted RBP6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 TNNT2P45379 298 aaPredicted RBP6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 CBLBQ13191 982 aa6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 NPAS3Q8IXF0 933 aa6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 RAPGEF4Q8WZA2 1011 aa6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 ZNF592Q92610 1267 aa6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 SYTL4Q96C24 671 aaPredicted RBP6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 PDGFDQ9GZP0 370 aaPredicted RBP6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 TMPRSS4Q9NRS4 437 aa6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 TBC1D2BQ9UPU7 963 aa6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 PCDHB9Q9Y5E1 797 aa6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 FLT4P35916 1363 aa6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 SMG6Q86US8 1419 aaKnown RBP6.89□□□□□ -1.31
CHEK2P3-201ENST00000416118 MEGF6O75095 1541 aa6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 KIF24Q5T7B8 1368 aa6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 SPINT1O43278 529 aa6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 LILRA1O75019 489 aa6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 GIGYF1O75420 1035 aaPredicted RBP6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 WFS1O76024 890 aa6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 ZBTB7AO95365 584 aa6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 BMP2P12643 396 aa6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 SLC15A2Q16348 729 aa6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 C6orf118Q5T5N4 469 aa6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 ZNF784Q8NCA9 323 aaPredicted RBP6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 SPON1Q9HCB6 807 aa6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 PRM3Q9NNZ6 103 aa6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 POLKQ9UBT6 870 aa6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 NXF1Q9UBU9 619 aaKnown RBP6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 ZNF330Q9Y3S2 320 aaPredicted RBP6.88□□□□□ -1.31
CHEK2P3-201ENST00000416118 WASHC2AQ641Q2 1341 aa6.87□□□□□ -1.31
CHEK2P3-201ENST00000416118 ADD1P35611 737 aaKnown RBP6.87□□□□□ -1.31
CHEK2P3-201ENST00000416118 IRF5Q13568 498 aa6.87□□□□□ -1.31
CHEK2P3-201ENST00000416118 LCE2CQ5TA81 110 aa6.87□□□□□ -1.31
CHEK2P3-201ENST00000416118 LRRC4BQ9NT99 713 aa6.87□□□□□ -1.31
CHEK2P3-201ENST00000416118 PPP1R1BQ9UD71 204 aaPredicted RBP6.87□□□□□ -1.31
CHEK2P3-201ENST00000416118 RGPD5Q99666 1765 aa6.87□□□□□ -1.31
CHEK2P3-201ENST00000416118 LRP5O75197 1615 aa6.87□□□□□ -1.31
CHEK2P3-201ENST00000416118 KCNQ4P56696 695 aa6.86□□□□□ -1.31
CHEK2P3-201ENST00000416118 MCM6Q14566 821 aa6.86□□□□□ -1.31
CHEK2P3-201ENST00000416118 ZNF827Q17R98 1081 aa6.86□□□□□ -1.31
CHEK2P3-201ENST00000416118 KDF1Q8NAX2 398 aaPredicted RBP6.86□□□□□ -1.31
CHEK2P3-201ENST00000416118 LTN1O94822 1766 aa6.86□□□□□ -1.31
CHEK2P3-201ENST00000416118 NUP188Q5SRE5 1749 aa6.86□□□□□ -1.31
CHEK2P3-201ENST00000416118 RREB1Q92766 1687 aa6.86□□□□□ -1.31
CHEK2P3-201ENST00000416118 WNK3Q9BYP7 1800 aa6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 NSD2O96028 1365 aa6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 PCDH11XQ9BZA7 1347 aa6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 PCDH11YQ9BZA8 1340 aa6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 SOBPA7XYQ1 873 aa6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 CYP27B1O15528 508 aa6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 ADH1AP07327 375 aa6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 RAB15P59190 212 aa6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 EIF4A2Q14240 407 aaKnown RBP6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 SLC27A3Q5K4L6 730 aa6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 RNF20Q5VTR2 975 aa6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 MORC1Q86VD1 984 aa6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 DNMT3LQ9UJW3 386 aa6.85□□□□□ -1.31
CHEK2P3-201ENST00000416118 MYOM1P52179 1685 aa6.84□□□□□ -1.31
CHEK2P3-201ENST00000416118 KIF7Q2M1P5 1343 aa6.84□□□□□ -1.31
CHEK2P3-201ENST00000416118 WIPF1O43516 503 aa6.84□□□□□ -1.31
CHEK2P3-201ENST00000416118 MPRIPQ6WCQ1 1025 aa6.84□□□□□ -1.31
CHEK2P3-201ENST00000416118 MTFR1LQ9H019 292 aa6.84□□□□□ -1.31
CHEK2P3-201ENST00000416118 CCNL1Q9UK58 526 aaPredicted RBP6.84□□□□□ -1.31
CHEK2P3-201ENST00000416118 SPG7Q9UQ90 795 aa6.84□□□□□ -1.31
CHEK2P3-201ENST00000416118 KNSTRNQ9Y448 316 aa6.84□□□□□ -1.31
CHEK2P3-201ENST00000416118 NHSQ6T4R5 1651 aa6.84□□□□□ -1.32
CHEK2P3-201ENST00000416118 FAM208AQ9UK61 1670 aaKnown RBP6.84□□□□□ -1.32
CHEK2P3-201ENST00000416118 TTLL8A6PVC2 850 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms