RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 NLRP3Q96P20 1036 aa17.18■□□□□ 0.34
CPNE1-209ENST00000415920 MS4A1P11836 297 aa17.17■□□□□ 0.34
CPNE1-209ENST00000415920 CCT4P50991 539 aaKnown RBP17.17■□□□□ 0.34
CPNE1-209ENST00000415920 CXCL9Q07325 125 aa17.17■□□□□ 0.34
CPNE1-209ENST00000415920 CYP4F22Q6NT55 531 aa17.17■□□□□ 0.34
CPNE1-209ENST00000415920 TMEM57Q8N5G2 664 aa17.17■□□□□ 0.34
CPNE1-209ENST00000415920 LINS1Q8NG48 757 aa17.17■□□□□ 0.34
CPNE1-209ENST00000415920 SRCIN1Q9C0H9 1055 aa17.17■□□□□ 0.34
CPNE1-209ENST00000415920 DUOX1Q9NRD9 1551 aa17.17■□□□□ 0.34
CPNE1-209ENST00000415920 NEURL1BA8MQ27 555 aa17.16■□□□□ 0.34
CPNE1-209ENST00000415920 GRM1Q13255 1194 aa17.16■□□□□ 0.34
CPNE1-209ENST00000415920 BEND3Q5T5X7 828 aa17.16■□□□□ 0.34
CPNE1-209ENST00000415920 C20orf194Q5TEA3 1177 aa17.16■□□□□ 0.34
CPNE1-209ENST00000415920 NLRP10Q86W26 655 aa17.16■□□□□ 0.34
CPNE1-209ENST00000415920 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
CPNE1-209ENST00000415920 SHTN1A0MZ66 631 aa17.15■□□□□ 0.34
CPNE1-209ENST00000415920 IGKV5-2P06315 115 aa17.15■□□□□ 0.34
CPNE1-209ENST00000415920 GMPSP49915 693 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-209ENST00000415920 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
CPNE1-209ENST00000415920 PAXIP1Q6ZW49 1069 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-209ENST00000415920 USP50Q70EL3 339 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-209ENST00000415920 CAPNS2Q96L46 248 aa17.15■□□□□ 0.34
CPNE1-209ENST00000415920 ISCA1Q9BUE6 129 aa17.15■□□□□ 0.34
CPNE1-209ENST00000415920 RTFDC1Q9BY42 306 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-209ENST00000415920 CWC25Q9NXE8 425 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-209ENST00000415920 IRX6P78412 446 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-209ENST00000415920 ZNRF3Q9ULT6 936 aa17.14■□□□□ 0.33
CPNE1-209ENST00000415920 COG6Q9Y2V7 657 aa17.14■□□□□ 0.33
CPNE1-209ENST00000415920 LRRC37AA6NMS7 1700 aa17.13■□□□□ 0.33
CPNE1-209ENST00000415920 AOC2O75106 756 aa17.13■□□□□ 0.33
CPNE1-209ENST00000415920 ALDH1L1O75891 902 aa17.13■□□□□ 0.33
CPNE1-209ENST00000415920 RAD17O75943 681 aa17.13■□□□□ 0.33
CPNE1-209ENST00000415920 HIRAP54198 1017 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-209ENST00000415920 PDE3AQ14432 1141 aa17.13■□□□□ 0.33
CPNE1-209ENST00000415920 MVPQ14764 893 aaKnown RBP17.13■□□□□ 0.33
CPNE1-209ENST00000415920 RTL5Q5HYW3 569 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-209ENST00000415920 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
CPNE1-209ENST00000415920 DPP8Q6V1X1 898 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-209ENST00000415920 SP8Q8IXZ3 490 aa17.13■□□□□ 0.33
CPNE1-209ENST00000415920 GLIS2Q9BZE0 524 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-209ENST00000415920 ADARB2Q9NS39 739 aaKnown RBP17.13■□□□□ 0.33
CPNE1-209ENST00000415920 TSKSQ9UJT2 592 aa17.13■□□□□ 0.33
CPNE1-209ENST00000415920 YDJCA8MPS7 323 aa17.12■□□□□ 0.33
CPNE1-209ENST00000415920 GCKRQ14397 625 aa17.12■□□□□ 0.33
CPNE1-209ENST00000415920 DLK2Q6UY11 383 aa17.12■□□□□ 0.33
CPNE1-209ENST00000415920 MPNDQ8N594 471 aa17.12■□□□□ 0.33
CPNE1-209ENST00000415920 CCDC191Q8NCU4 936 aa17.12■□□□□ 0.33
CPNE1-209ENST00000415920 TRPM4Q8TD43 1214 aa17.12■□□□□ 0.33
CPNE1-209ENST00000415920 TRMT112Q9UI30 125 aaKnown RBP17.12■□□□□ 0.33
CPNE1-209ENST00000415920 TLL2Q9Y6L7 1015 aa17.12■□□□□ 0.33
CPNE1-209ENST00000415920 MAP2K1Q02750 393 aaPredicted RBP17.11■□□□□ 0.33
CPNE1-209ENST00000415920 KIAA2012Q0VF49 1180 aa17.11■□□□□ 0.33
CPNE1-209ENST00000415920 GPR101Q96P66 508 aaPredicted RBP17.11■□□□□ 0.33
CPNE1-209ENST00000415920 GRM8O00222 908 aa17.1■□□□□ 0.33
CPNE1-209ENST00000415920 BBOX1O75936 387 aa17.1■□□□□ 0.33
CPNE1-209ENST00000415920 NEFLP07196 543 aa17.1■□□□□ 0.33
CPNE1-209ENST00000415920 GRAPQ13588 217 aa17.1■□□□□ 0.33
CPNE1-209ENST00000415920 CIAPIN1Q6FI81 312 aa17.1■□□□□ 0.33
CPNE1-209ENST00000415920 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
CPNE1-209ENST00000415920 GRAPLQ8TC17 118 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-209ENST00000415920 ABHD8Q96I13 439 aa17.1■□□□□ 0.33
CPNE1-209ENST00000415920 CRBNQ96SW2 442 aa17.1■□□□□ 0.33
CPNE1-209ENST00000415920 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
CPNE1-209ENST00000415920 SH3TC1Q8TE82 1336 aa17.1■□□□□ 0.33
CPNE1-209ENST00000415920 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
CPNE1-209ENST00000415920 TRIM28Q13263 835 aaKnown RBP17.09■□□□□ 0.33
CPNE1-209ENST00000415920 DDX46Q7L014 1031 aaKnown RBP17.09■□□□□ 0.33
CPNE1-209ENST00000415920 SUPT20HQ8NEM7 779 aa17.09■□□□□ 0.33
CPNE1-209ENST00000415920 JARID2Q92833 1246 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-209ENST00000415920 MEIS3Q99687 375 aa17.09■□□□□ 0.33
CPNE1-209ENST00000415920 TMX4Q9H1E5 349 aaPredicted RBP17.09■□□□□ 0.33
CPNE1-209ENST00000415920 VPS33BQ9H267 617 aa17.09■□□□□ 0.33
CPNE1-209ENST00000415920 DDX19BQ9UMR2 479 aa17.09■□□□□ 0.33
CPNE1-209ENST00000415920 A0A1B0GUL6 1792 aa17.08■□□□□ 0.33
CPNE1-209ENST00000415920 PCCAP05165 728 aaPredicted RBP17.08■□□□□ 0.32
CPNE1-209ENST00000415920 UBTFL1P0CB47 393 aaPredicted RBP17.08■□□□□ 0.32
CPNE1-209ENST00000415920 SAPCD2Q86UD0 394 aa17.08■□□□□ 0.32
CPNE1-209ENST00000415920 CELF1Q92879 486 aaKnown RBP17.08■□□□□ 0.32
CPNE1-209ENST00000415920 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
CPNE1-209ENST00000415920 ZNF408Q9H9D4 720 aa17.08■□□□□ 0.32
CPNE1-209ENST00000415920 PGAP2Q9UHJ9 254 aa17.08■□□□□ 0.32
CPNE1-209ENST00000415920 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
CPNE1-209ENST00000415920 ECE1P42892 770 aa17.07■□□□□ 0.32
CPNE1-209ENST00000415920 ZBTB38Q8NAP3 1195 aaPredicted RBP17.07■□□□□ 0.32
CPNE1-209ENST00000415920 CDHR2Q9BYE9 1310 aa17.06■□□□□ 0.32
CPNE1-209ENST00000415920 EGFRP00533 1210 aa17.06■□□□□ 0.32
CPNE1-209ENST00000415920 NBPF7P0C2Y1 421 aaPredicted RBP17.06■□□□□ 0.32
CPNE1-209ENST00000415920 ZIC5Q96T25 663 aa17.06■□□□□ 0.32
CPNE1-209ENST00000415920 DBNDD1Q9H9R9 158 aa17.06■□□□□ 0.32
CPNE1-209ENST00000415920 KCNQ5Q9NR82 932 aa17.06■□□□□ 0.32
CPNE1-209ENST00000415920 CNOT7Q9UIV1 285 aaKnown RBP17.06■□□□□ 0.32
CPNE1-209ENST00000415920 GNAI3P08754 354 aa17.05■□□□□ 0.32
CPNE1-209ENST00000415920 SAMD7Q7Z3H4 446 aa17.05■□□□□ 0.32
CPNE1-209ENST00000415920 MICALL2Q8IY33 904 aa17.05■□□□□ 0.32
CPNE1-209ENST00000415920 USP44Q9H0E7 712 aa17.05■□□□□ 0.32
CPNE1-209ENST00000415920 C1orf115Q9H7X2 142 aa17.05■□□□□ 0.32
CPNE1-209ENST00000415920 POLR2AP24928 1970 aaKnown RBP17.04■□□□□ 0.32
CPNE1-209ENST00000415920 SCN9AQ15858 1988 aa17.04■□□□□ 0.32
CPNE1-209ENST00000415920 UTYO14607 1347 aa17.04■□□□□ 0.32
CPNE1-209ENST00000415920 PSMD14O00487 310 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms