RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 NOGQ13253 232 aa20.14■□□□□ 0.81
SBDSP1-201ENST00000415772 C2orf69Q8N8R5 385 aa20.14■□□□□ 0.81
SBDSP1-201ENST00000415772 CHMP4AQ9BY43 222 aa20.13■□□□□ 0.81
SBDSP1-201ENST00000415772 MBIPQ9NS73 344 aa20.13■□□□□ 0.81
SBDSP1-201ENST00000415772 POLLQ9UGP5 575 aa20.13■□□□□ 0.81
SBDSP1-201ENST00000415772 UFL1O94874 794 aa20.12■□□□□ 0.81
SBDSP1-201ENST00000415772 DDX58O95786 925 aaKnown RBP20.12■□□□□ 0.81
SBDSP1-201ENST00000415772 GNAI1P63096 354 aa20.12■□□□□ 0.81
SBDSP1-201ENST00000415772 TRIM28Q13263 835 aaKnown RBP20.12■□□□□ 0.81
SBDSP1-201ENST00000415772 CCDC152Q4G0S7 254 aa20.12■□□□□ 0.81
SBDSP1-201ENST00000415772 ZBTB38Q8NAP3 1195 aaPredicted RBP20.12■□□□□ 0.81
SBDSP1-201ENST00000415772 MYD88Q99836 296 aa20.12■□□□□ 0.81
SBDSP1-201ENST00000415772 ELL2O00472 640 aaPredicted RBP20.11■□□□□ 0.81
SBDSP1-201ENST00000415772 FAM161AQ3B820 660 aa20.11■□□□□ 0.81
SBDSP1-201ENST00000415772 SULF1Q8IWU6 871 aa20.11■□□□□ 0.81
SBDSP1-201ENST00000415772 TBC1D16Q8TBP0 767 aa20.11■□□□□ 0.81
SBDSP1-201ENST00000415772 GGA1Q9UJY5 639 aa20.11■□□□□ 0.81
SBDSP1-201ENST00000415772 KIF4BQ2VIQ3 1234 aa20.1■□□□□ 0.81
SBDSP1-201ENST00000415772 GBA2Q9HCG7 927 aaPredicted RBP20.1■□□□□ 0.81
SBDSP1-201ENST00000415772 RGMBQ6NW40 437 aa20.09■□□□□ 0.81
SBDSP1-201ENST00000415772 PHAXQ9H814 394 aaKnown RBP20.09■□□□□ 0.81
SBDSP1-201ENST00000415772 IFT57Q9NWB7 429 aa20.09■□□□□ 0.81
SBDSP1-201ENST00000415772 CWC25Q9NXE8 425 aaPredicted RBP20.09■□□□□ 0.81
SBDSP1-201ENST00000415772 ADM5C9JUS6 153 aa20.08■□□□□ 0.81
SBDSP1-201ENST00000415772 PDE8AO60658 829 aa20.08■□□□□ 0.81
SBDSP1-201ENST00000415772 ZNF157P51786 506 aaPredicted RBP20.08■□□□□ 0.81
SBDSP1-201ENST00000415772 MLLT1Q03111 559 aaPredicted RBP20.08■□□□□ 0.81
SBDSP1-201ENST00000415772 DGKZQ13574 1117 aa20.08■□□□□ 0.81
SBDSP1-201ENST00000415772 CCDC191Q8NCU4 936 aa20.08■□□□□ 0.81
SBDSP1-201ENST00000415772 CCDC102AQ96A19 550 aa20.08■□□□□ 0.81
SBDSP1-201ENST00000415772 CCDC85AQ96PX6 553 aaPredicted RBP20.08■□□□□ 0.81
SBDSP1-201ENST00000415772 SEC31BQ9NQW1 1179 aa20.08■□□□□ 0.81
SBDSP1-201ENST00000415772 CCDC30Q5VVM6 783 aa20.07■□□□□ 0.8
SBDSP1-201ENST00000415772 ANKRD18AQ8IVF6 992 aa20.07■□□□□ 0.8
SBDSP1-201ENST00000415772 KCNQ5Q9NR82 932 aa20.07■□□□□ 0.8
SBDSP1-201ENST00000415772 GGA3Q9NZ52 723 aa20.07■□□□□ 0.8
SBDSP1-201ENST00000415772 PODXL2Q9NZ53 605 aa20.07■□□□□ 0.8
SBDSP1-201ENST00000415772 APAF1O14727 1248 aa20.06■□□□□ 0.8
SBDSP1-201ENST00000415772 PCCAP05165 728 aaPredicted RBP20.06■□□□□ 0.8
SBDSP1-201ENST00000415772 MCOLN1Q9GZU1 580 aa20.06■□□□□ 0.8
SBDSP1-201ENST00000415772 RTL9Q8NET4 1388 aa20.06■□□□□ 0.8
SBDSP1-201ENST00000415772 EGFRP00533 1210 aa20.05■□□□□ 0.8
SBDSP1-201ENST00000415772 VIL1P09327 827 aaKnown RBP20.05■□□□□ 0.8
SBDSP1-201ENST00000415772 DLK2Q6UY11 383 aa20.05■□□□□ 0.8
SBDSP1-201ENST00000415772 XDHP47989 1333 aa20.04■□□□□ 0.8
SBDSP1-201ENST00000415772 NEXNQ0ZGT2 675 aa20.04■□□□□ 0.8
SBDSP1-201ENST00000415772 JARID2Q92833 1246 aaPredicted RBP20.04■□□□□ 0.8
SBDSP1-201ENST00000415772 CDC5LQ99459 802 aaKnown RBP20.04■□□□□ 0.8
SBDSP1-201ENST00000415772 RSBN1LQ6PCB5 846 aaPredicted RBP20.03■□□□□ 0.8
SBDSP1-201ENST00000415772 AGBL3Q8NEM8 1001 aa20.03■□□□□ 0.8
SBDSP1-201ENST00000415772 METTL22Q9BUU2 404 aaPredicted RBP20.03■□□□□ 0.8
SBDSP1-201ENST00000415772 STK31Q9BXU1 1019 aa20.03■□□□□ 0.8
SBDSP1-201ENST00000415772 ZNF853P0CG23 659 aa20.02■□□□□ 0.8
SBDSP1-201ENST00000415772 ATP2B4P23634 1241 aa20.02■□□□□ 0.8
SBDSP1-201ENST00000415772 KIF23Q02241 960 aaPredicted RBP20.02■□□□□ 0.8
SBDSP1-201ENST00000415772 ANGEL2Q5VTE6 544 aaKnown RBP20.02■□□□□ 0.8
SBDSP1-201ENST00000415772 FBXW7Q969H0 707 aa20.02■□□□□ 0.8
SBDSP1-201ENST00000415772 CDCA5Q96FF9 252 aa20.02■□□□□ 0.8
SBDSP1-201ENST00000415772 PRKRIP1Q9H875 184 aaPredicted RBP20.02■□□□□ 0.8
SBDSP1-201ENST00000415772 MAP3K2Q9Y2U5 619 aa20.02■□□□□ 0.8
SBDSP1-201ENST00000415772 COL4A1P02462 1669 aa20.01■□□□□ 0.79
SBDSP1-201ENST00000415772 SCARF1Q14162 830 aa20.01■□□□□ 0.79
SBDSP1-201ENST00000415772 ZIC5Q96T25 663 aa20.01■□□□□ 0.79
SBDSP1-201ENST00000415772 SAGE1Q9NXZ1 904 aa20.01■□□□□ 0.79
SBDSP1-201ENST00000415772 USP17L3A6NCW0 530 aa20■□□□□ 0.79
SBDSP1-201ENST00000415772 USP17L4A6NCW7 530 aa20■□□□□ 0.79
SBDSP1-201ENST00000415772 TRPA1O75762 1119 aa20■□□□□ 0.79
SBDSP1-201ENST00000415772 USP17L8P0C7I0 530 aa20■□□□□ 0.79
SBDSP1-201ENST00000415772 USP17L1Q7RTZ2 530 aa20■□□□□ 0.79
SBDSP1-201ENST00000415772 PODNQ7Z5L7 613 aa20■□□□□ 0.79
SBDSP1-201ENST00000415772 C8orf58Q8NAV2 365 aa20■□□□□ 0.79
SBDSP1-201ENST00000415772 CTSWP56202 376 aa19.99■□□□□ 0.79
SBDSP1-201ENST00000415772 OGFOD1Q8N543 542 aa19.99■□□□□ 0.79
SBDSP1-201ENST00000415772 MYOZ2Q9NPC6 264 aa19.99■□□□□ 0.79
SBDSP1-201ENST00000415772 FAM155AB1AL88 458 aaPredicted RBP19.98■□□□□ 0.79
SBDSP1-201ENST00000415772 ZNF280AP59817 542 aaPredicted RBP19.98■□□□□ 0.79
SBDSP1-201ENST00000415772 TTLL12Q14166 644 aaPredicted RBP19.98■□□□□ 0.79
SBDSP1-201ENST00000415772 REM2Q8IYK8 340 aaPredicted RBP19.98■□□□□ 0.79
SBDSP1-201ENST00000415772 ASTN2O75129 1339 aaPredicted RBP19.98■□□□□ 0.79
SBDSP1-201ENST00000415772 PI4KAP2A4QPH2 592 aa19.97■□□□□ 0.79
SBDSP1-201ENST00000415772 SLC10A3P09131 477 aa19.97■□□□□ 0.79
SBDSP1-201ENST00000415772 KSR2Q6VAB6 950 aa19.97■□□□□ 0.79
SBDSP1-201ENST00000415772 PI4KAP1Q8N8J0 262 aa19.97■□□□□ 0.79
SBDSP1-201ENST00000415772 CASP8AP2Q9UKL3 1982 aa19.97■□□□□ 0.79
SBDSP1-201ENST00000415772 NF2P35240 595 aa19.96■□□□□ 0.79
SBDSP1-201ENST00000415772 IGHMBP2P38935 993 aaKnown RBP19.96■□□□□ 0.79
SBDSP1-201ENST00000415772 RGS19P49795 217 aa19.96■□□□□ 0.79
SBDSP1-201ENST00000415772 FKBP1BP68106 108 aa19.96■□□□□ 0.79
SBDSP1-201ENST00000415772 RNF186Q9NXI6 227 aa19.96■□□□□ 0.79
SBDSP1-201ENST00000415772 PITPNM2Q9BZ72 1349 aa19.96■□□□□ 0.79
SBDSP1-201ENST00000415772 BSDC1Q9NW68 430 aaPredicted RBP19.95■□□□□ 0.78
SBDSP1-201ENST00000415772 MED23Q9ULK4 1368 aa19.95■□□□□ 0.78
SBDSP1-201ENST00000415772 ZNF609O15014 1411 aa19.94■□□□□ 0.78
SBDSP1-201ENST00000415772 POLR2AP24928 1970 aaKnown RBP19.94■□□□□ 0.78
SBDSP1-201ENST00000415772 SCN9AQ15858 1988 aa19.94■□□□□ 0.78
SBDSP1-201ENST00000415772 CCT4P50991 539 aaKnown RBP19.94■□□□□ 0.78
SBDSP1-201ENST00000415772 MYO3BQ8WXR4 1341 aa19.94■□□□□ 0.78
SBDSP1-201ENST00000415772 KCNJ4P48050 445 aa19.93■□□□□ 0.78
SBDSP1-201ENST00000415772 RASAL3Q86YV0 1011 aa19.93■□□□□ 0.78
SBDSP1-201ENST00000415772 TTLL11Q8NHH1 800 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms