RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TRAPPC3LQ5T215 181 aa6.96□□□□□ -1.3
HMGB3P23-201ENST00000414981 HFE2Q6ZVN8 426 aa6.96□□□□□ -1.3
HMGB3P23-201ENST00000414981 CACTIN-AS1Q8N1I8 211 aa6.96□□□□□ -1.3
HMGB3P23-201ENST00000414981 PMEPA1Q969W9 287 aa6.96□□□□□ -1.3
HMGB3P23-201ENST00000414981 RBSNQ9H1K0 784 aa6.96□□□□□ -1.3
HMGB3P23-201ENST00000414981 GHRHP01286 108 aa6.95□□□□□ -1.3
HMGB3P23-201ENST00000414981 ITGB2P05107 769 aa6.95□□□□□ -1.3
HMGB3P23-201ENST00000414981 EHHADHQ08426 723 aa6.95□□□□□ -1.3
HMGB3P23-201ENST00000414981 HYAL2Q12891 473 aa6.95□□□□□ -1.3
HMGB3P23-201ENST00000414981 ECM1Q16610 540 aa6.95□□□□□ -1.3
HMGB3P23-201ENST00000414981 MSL1Q68DK7 614 aa6.95□□□□□ -1.3
HMGB3P23-201ENST00000414981 ZNF438Q7Z4V0 828 aa6.95□□□□□ -1.3
HMGB3P23-201ENST00000414981 CCER1Q8TC90 406 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P23-201ENST00000414981 SMG9Q9H0W8 520 aaKnown RBP6.95□□□□□ -1.3
HMGB3P23-201ENST00000414981 POLIQ9UNA4 740 aa6.95□□□□□ -1.3
HMGB3P23-201ENST00000414981 MSTNO14793 375 aa6.94□□□□□ -1.3
HMGB3P23-201ENST00000414981 FZD6O60353 706 aa6.94□□□□□ -1.3
HMGB3P23-201ENST00000414981 KIF4AO95239 1232 aa6.94□□□□□ -1.3
HMGB3P23-201ENST00000414981 BRD1O95696 1058 aa6.94□□□□□ -1.3
HMGB3P23-201ENST00000414981 EIF2AK2P19525 551 aaKnown RBP6.94□□□□□ -1.3
HMGB3P23-201ENST00000414981 C8orf34Q49A92 452 aa6.94□□□□□ -1.3
HMGB3P23-201ENST00000414981 GPAT2Q6NUI2 795 aa6.94□□□□□ -1.3
HMGB3P23-201ENST00000414981 DTWD1Q8N5C7 304 aa6.94□□□□□ -1.3
HMGB3P23-201ENST00000414981 PLD4Q96BZ4 506 aa6.94□□□□□ -1.3
HMGB3P23-201ENST00000414981 SPACA7Q96KW9 195 aa6.94□□□□□ -1.3
HMGB3P23-201ENST00000414981 ANO2Q9NQ90 1003 aa6.94□□□□□ -1.3
HMGB3P23-201ENST00000414981 TMEM63CQ9P1W3 806 aa6.94□□□□□ -1.3
HMGB3P23-201ENST00000414981 A0A0A0MRY4 1105 aa6.93□□□□□ -1.3
HMGB3P23-201ENST00000414981 ZNF211Q13398 564 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P23-201ENST00000414981 DMRTC2Q8IXT2 367 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P23-201ENST00000414981 NSUN5Q96P11 429 aaKnown RBP6.93□□□□□ -1.3
HMGB3P23-201ENST00000414981 CNTN3Q9P232 1028 aa6.93□□□□□ -1.3
HMGB3P23-201ENST00000414981 C1QTNF9BB2RNN3 333 aa6.92□□□□□ -1.3
HMGB3P23-201ENST00000414981 SERPINB4P48594 390 aa6.92□□□□□ -1.3
HMGB3P23-201ENST00000414981 RAC1P63000 192 aa6.92□□□□□ -1.3
HMGB3P23-201ENST00000414981 COL13A1Q5TAT6 717 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P23-201ENST00000414981 CD163Q86VB7 1156 aa6.92□□□□□ -1.3
HMGB3P23-201ENST00000414981 WFDC8Q8IUA0 241 aa6.92□□□□□ -1.3
HMGB3P23-201ENST00000414981 CEP120Q8N960 986 aa6.92□□□□□ -1.3
HMGB3P23-201ENST00000414981 NACC1Q96RE7 527 aa6.92□□□□□ -1.3
HMGB3P23-201ENST00000414981 SPOCK3Q9BQ16 436 aa6.92□□□□□ -1.3
HMGB3P23-201ENST00000414981 CCDC87Q9NVE4 849 aa6.92□□□□□ -1.3
HMGB3P23-201ENST00000414981 SALL4Q9UJQ4 1053 aa6.92□□□□□ -1.3
HMGB3P23-201ENST00000414981 APBA3O96018 575 aa6.91□□□□□ -1.3
HMGB3P23-201ENST00000414981 ELNP15502 786 aa6.91□□□□□ -1.3
HMGB3P23-201ENST00000414981 CES1P23141 567 aa6.91□□□□□ -1.3
HMGB3P23-201ENST00000414981 GLYCTKQ8IVS8 523 aa6.91□□□□□ -1.3
HMGB3P23-201ENST00000414981 GJD3Q8N144 294 aa6.91□□□□□ -1.3
HMGB3P23-201ENST00000414981 C1orf127Q8N9H9 656 aa6.91□□□□□ -1.3
HMGB3P23-201ENST00000414981 CITED4Q96RK1 184 aa6.91□□□□□ -1.3
HMGB3P23-201ENST00000414981 GNEQ9Y223 722 aaKnown RBP6.91□□□□□ -1.3
HMGB3P23-201ENST00000414981 C9orf172C9J069 976 aa6.9□□□□□ -1.3
HMGB3P23-201ENST00000414981 CYP2E1P05181 493 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P23-201ENST00000414981 BAG6P46379 1132 aa6.9□□□□□ -1.3
HMGB3P23-201ENST00000414981 ARHGAP4P98171 946 aa6.9□□□□□ -1.3
HMGB3P23-201ENST00000414981 NCAPG2Q86XI2 1143 aa6.9□□□□□ -1.3
HMGB3P23-201ENST00000414981 FBXO11Q86XK2 927 aa6.9□□□□□ -1.3
HMGB3P23-201ENST00000414981 FMR1NBQ8N0W7 255 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P23-201ENST00000414981 MUC3BQ9H195 1237 aa6.9□□□□□ -1.3
HMGB3P23-201ENST00000414981 A6NHS1 94 aa6.89□□□□□ -1.31
HMGB3P23-201ENST00000414981 FAM229AH3BQW9 127 aa6.89□□□□□ -1.31
HMGB3P23-201ENST00000414981 H3BRB1 525 aa6.89□□□□□ -1.31
HMGB3P23-201ENST00000414981 TNFRSF21O75509 655 aa6.89□□□□□ -1.31
HMGB3P23-201ENST00000414981 PROCP04070 461 aa6.89□□□□□ -1.31
HMGB3P23-201ENST00000414981 CHRNA4P43681 627 aa6.89□□□□□ -1.31
HMGB3P23-201ENST00000414981 GRIK4Q16099 956 aa6.89□□□□□ -1.31
HMGB3P23-201ENST00000414981 IL22RA1Q8N6P7 574 aa6.89□□□□□ -1.31
HMGB3P23-201ENST00000414981 LENG1Q96BZ8 264 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P23-201ENST00000414981 PBX4Q9BYU1 374 aa6.89□□□□□ -1.31
HMGB3P23-201ENST00000414981 TUT1Q9H6E5 874 aaKnown RBP6.89□□□□□ -1.31
HMGB3P23-201ENST00000414981 BRPF3Q9ULD4 1205 aa6.89□□□□□ -1.31
HMGB3P23-201ENST00000414981 SMNDC1O75940 238 aaKnown RBP eCLIP6.88□□□□□ -1.31
HMGB3P23-201ENST00000414981 CEP135Q66GS9 1140 aa6.88□□□□□ -1.31
HMGB3P23-201ENST00000414981 GDF6Q6KF10 455 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P23-201ENST00000414981 CHRDQ9H2X0 955 aa6.88□□□□□ -1.31
HMGB3P23-201ENST00000414981 SRA1Q9HD15 236 aaKnown RBP6.88□□□□□ -1.31
HMGB3P23-201ENST00000414981 PHACTR2O75167 634 aa6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 NEFLP07196 543 aa6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 SELPP16109 830 aa6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 NRG1Q02297 640 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 PDE3BQ13370 1112 aa6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 IGF2-ASQ6U949 168 aa6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 MAP4K3Q8IVH8 894 aa6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 DCAF11Q8TEB1 546 aa6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 SNX29Q8TEQ0 813 aa6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 TRAIPQ9BWF2 469 aa6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 RASSF4Q9H2L5 321 aa6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 ZFYVE28Q9HCC9 887 aa6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 TRIM33Q9UPN9 1127 aa6.87□□□□□ -1.31
HMGB3P23-201ENST00000414981 SOWAHDA6NJG2 315 aa6.86□□□□□ -1.31
HMGB3P23-201ENST00000414981 NFKBIEO00221 500 aa6.86□□□□□ -1.31
HMGB3P23-201ENST00000414981 NDUFB5O43674 189 aa6.86□□□□□ -1.31
HMGB3P23-201ENST00000414981 GATA4P43694 442 aa6.86□□□□□ -1.31
HMGB3P23-201ENST00000414981 ATP11AP98196 1134 aa6.86□□□□□ -1.31
HMGB3P23-201ENST00000414981 POP1Q99575 1024 aaKnown RBP6.86□□□□□ -1.31
HMGB3P23-201ENST00000414981 ADAM19Q9H013 955 aa6.86□□□□□ -1.31
HMGB3P23-201ENST00000414981 PPME1Q9Y570 386 aa6.86□□□□□ -1.31
HMGB3P23-201ENST00000414981 EDN3P14138 238 aa6.85□□□□□ -1.31
HMGB3P23-201ENST00000414981 CDC27P30260 824 aa6.85□□□□□ -1.31
HMGB3P23-201ENST00000414981 ADGRE1Q14246 886 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 237.2 ms