RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 POLA2Q14181 598 aa38.1■■■■□ 3.69
CSNK1E-206ENST00000413574 SOGA3Q5TF21 947 aa38.1■■■■□ 3.69
CSNK1E-206ENST00000413574 SIRT2Q8IXJ6 389 aa38.1■■■■□ 3.69
CSNK1E-206ENST00000413574 A0A1B0GUL6 1792 aa38.09■■■■□ 3.69
CSNK1E-206ENST00000413574 SSH3Q8TE77 659 aa38.09■■■■□ 3.69
CSNK1E-206ENST00000413574 NFKBIEO00221 500 aa38.09■■■■□ 3.69
CSNK1E-206ENST00000413574 GRIN3BO60391 1043 aa38.09■■■■□ 3.69
CSNK1E-206ENST00000413574 CC2D2BQ6DHV5 1058 aa38.09■■■■□ 3.69
CSNK1E-206ENST00000413574 NSFL1CQ9UNZ2 370 aaKnown RBP38.09■■■■□ 3.69
CSNK1E-206ENST00000413574 LTBP1Q14766 1721 aa38.07■■■■□ 3.69
CSNK1E-206ENST00000413574 DCAF8L1A6NGE4 600 aa38.07■■■■□ 3.68
CSNK1E-206ENST00000413574 RASSF7Q02833 373 aa38.07■■■■□ 3.68
CSNK1E-206ENST00000413574 RPAP2Q8IXW5 612 aaPredicted RBP38.07■■■■□ 3.68
CSNK1E-206ENST00000413574 RTKN2Q8IZC4 609 aa38.07■■■■□ 3.68
CSNK1E-206ENST00000413574 MPNDQ8N594 471 aa38.07■■■■□ 3.68
CSNK1E-206ENST00000413574 HELBQ8NG08 1087 aaPredicted RBP38.07■■■■□ 3.68
CSNK1E-206ENST00000413574 COPRSQ9NQ92 184 aa38.07■■■■□ 3.68
CSNK1E-206ENST00000413574 PCDHB15Q9Y5E8 787 aa38.07■■■■□ 3.68
CSNK1E-206ENST00000413574 RIPOR2Q9Y4F9 1068 aa38.06■■■■□ 3.68
CSNK1E-206ENST00000413574 CHRNDQ07001 517 aa38.05■■■■□ 3.68
CSNK1E-206ENST00000413574 ANKIB1Q9P2G1 1089 aa38.05■■■■□ 3.68
CSNK1E-206ENST00000413574 CCDC88AQ3V6T2 1871 aa38.05■■■■□ 3.68
CSNK1E-206ENST00000413574 DUOX1Q9NRD9 1551 aa38.05■■■■□ 3.68
CSNK1E-206ENST00000413574 WTIPA6NIX2 430 aaPredicted RBP38.05■■■■□ 3.68
CSNK1E-206ENST00000413574 DPP8Q6V1X1 898 aaPredicted RBP38.05■■■■□ 3.68
CSNK1E-206ENST00000413574 EYA2O00167 538 aa38.04■■■■□ 3.68
CSNK1E-206ENST00000413574 TAF5LO75529 589 aa38.03■■■■□ 3.68
CSNK1E-206ENST00000413574 ATG9AQ7Z3C6 839 aa38.03■■■■□ 3.68
CSNK1E-206ENST00000413574 SBF1O95248 1867 aa38.03■■■■□ 3.68
CSNK1E-206ENST00000413574 TAOK3Q9H2K8 898 aa38.02■■■■□ 3.68
CSNK1E-206ENST00000413574 PRELPP51888 382 aa38.01■■■■□ 3.68
CSNK1E-206ENST00000413574 XDHP47989 1333 aa38.01■■■■□ 3.67
CSNK1E-206ENST00000413574 FKBP4Q02790 459 aaKnown RBP eCLIP38.01■■■■□ 3.67
CSNK1E-206ENST00000413574 POLLQ9UGP5 575 aa38.01■■■■□ 3.67
CSNK1E-206ENST00000413574 GPR101Q96P66 508 aaPredicted RBP38■■■■□ 3.67
CSNK1E-206ENST00000413574 PODXL2Q9NZ53 605 aa38■■■■□ 3.67
CSNK1E-206ENST00000413574 SNAP23O00161 211 aa37.99■■■■□ 3.67
CSNK1E-206ENST00000413574 GRIPAP1Q4V328 841 aa37.99■■■■□ 3.67
CSNK1E-206ENST00000413574 PSMD1Q99460 953 aa37.99■■■■□ 3.67
CSNK1E-206ENST00000413574 ZNF277Q9NRM2 450 aaPredicted RBP37.99■■■■□ 3.67
CSNK1E-206ENST00000413574 METTL24Q5JXM2 366 aa37.98■■■■□ 3.67
CSNK1E-206ENST00000413574 TBC1D16Q8TBP0 767 aa37.98■■■■□ 3.67
CSNK1E-206ENST00000413574 ANKRD2Q9GZV1 360 aa37.98■■■■□ 3.67
CSNK1E-206ENST00000413574 SURF6O75683 361 aaKnown RBP37.98■■■■□ 3.67
CSNK1E-206ENST00000413574 CIAO1O76071 339 aa37.98■■■■□ 3.67
CSNK1E-206ENST00000413574 UFL1O94874 794 aa37.98■■■■□ 3.67
CSNK1E-206ENST00000413574 RTFDC1Q9BY42 306 aaPredicted RBP37.98■■■■□ 3.67
CSNK1E-206ENST00000413574 MROH5Q6ZUA9 1318 aa37.97■■■■□ 3.67
CSNK1E-206ENST00000413574 C6orf229H3BNL8 230 aa37.97■■■■□ 3.67
CSNK1E-206ENST00000413574 GGA1Q9UJY5 639 aa37.97■■■■□ 3.67
CSNK1E-206ENST00000413574 LTBP3Q9NS15 1303 aa37.96■■■■□ 3.67
CSNK1E-206ENST00000413574 HMMRO75330 724 aa37.96■■■■□ 3.67
CSNK1E-206ENST00000413574 FBXO3Q9UK99 471 aa37.96■■■■□ 3.67
CSNK1E-206ENST00000413574 IL15P40933 162 aaPredicted RBP37.94■■■■□ 3.66
CSNK1E-206ENST00000413574 AAMPQ13685 434 aa37.94■■■■□ 3.66
CSNK1E-206ENST00000413574 VGLL2Q8N8G2 317 aa37.94■■■■□ 3.66
CSNK1E-206ENST00000413574 EXOC6BQ9Y2D4 811 aa37.94■■■■□ 3.66
CSNK1E-206ENST00000413574 G3BP1Q13283 466 aaKnown RBP eCLIP37.94■■■■□ 3.66
CSNK1E-206ENST00000413574 NOP58Q9Y2X3 529 aaKnown RBP37.93■■■■□ 3.66
CSNK1E-206ENST00000413574 ATP2B4P23634 1241 aa37.92■■■■□ 3.66
CSNK1E-206ENST00000413574 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP37.92■■■■□ 3.66
CSNK1E-206ENST00000413574 ZNF804BA4D1E1 1349 aa37.92■■■■□ 3.66
CSNK1E-206ENST00000413574 LEMD3Q9Y2U8 911 aa37.91■■■■□ 3.66
CSNK1E-206ENST00000413574 RIMBP2O15034 1052 aa37.9■■■■□ 3.66
CSNK1E-206ENST00000413574 PDE8BO95263 885 aa37.9■■■■□ 3.66
CSNK1E-206ENST00000413574 OS9Q13438 667 aaPredicted RBP37.9■■■■□ 3.66
CSNK1E-206ENST00000413574 AOC3Q16853 763 aa37.9■■■■□ 3.66
CSNK1E-206ENST00000413574 SUPT20HQ8NEM7 779 aa37.9■■■■□ 3.66
CSNK1E-206ENST00000413574 SASH1O94885 1247 aa37.9■■■■□ 3.66
CSNK1E-206ENST00000413574 LMNB1P20700 586 aa37.9■■■■□ 3.66
CSNK1E-206ENST00000413574 KLRK1P26718 216 aa37.9■■■■□ 3.66
CSNK1E-206ENST00000413574 KCNJ4P48050 445 aa37.9■■■■□ 3.66
CSNK1E-206ENST00000413574 TFCP2Q12800 502 aa37.9■■■■□ 3.66
CSNK1E-206ENST00000413574 COL4A5P29400 1685 aa37.89■■■■□ 3.66
CSNK1E-206ENST00000413574 IARSP41252 1262 aaKnown RBP37.89■■■■□ 3.66
CSNK1E-206ENST00000413574 WASHC4Q2M389 1173 aa37.89■■■■□ 3.66
CSNK1E-206ENST00000413574 CEP126Q9P2H0 1117 aa37.89■■■■□ 3.66
CSNK1E-206ENST00000413574 DICER1Q9UPY3 1922 aaKnown RBP37.88■■■■□ 3.66
CSNK1E-206ENST00000413574 PPIP5K2O43314 1243 aa37.87■■■■□ 3.65
CSNK1E-206ENST00000413574 CHD4Q14839 1912 aa37.87■■■■□ 3.65
CSNK1E-206ENST00000413574 C9orf131Q5VYM1 1079 aa37.87■■■■□ 3.65
CSNK1E-206ENST00000413574 TXNRD3Q86VQ6 643 aa37.87■■■■□ 3.65
CSNK1E-206ENST00000413574 RNF181Q9P0P0 153 aa37.87■■■■□ 3.65
CSNK1E-206ENST00000413574 APBB1O00213 710 aa37.86■■■■□ 3.65
CSNK1E-206ENST00000413574 NEFLP07196 543 aa37.85■■■■□ 3.65
CSNK1E-206ENST00000413574 LARGE2Q8N3Y3 721 aa37.85■■■■□ 3.65
CSNK1E-206ENST00000413574 EYA3Q99504 573 aa37.85■■■■□ 3.65
CSNK1E-206ENST00000413574 KIAA2012Q0VF49 1180 aa37.84■■■■□ 3.65
CSNK1E-206ENST00000413574 ZC3H12CQ9C0D7 883 aaKnown RBP37.84■■■■□ 3.65
CSNK1E-206ENST00000413574 UBE4AQ14139 1066 aa37.83■■■■□ 3.65
CSNK1E-206ENST00000413574 PUM3Q15397 648 aaKnown RBP37.83■■■■□ 3.65
CSNK1E-206ENST00000413574 FGFR2P21802 821 aa37.82■■■■□ 3.64
CSNK1E-206ENST00000413574 IRS2Q9Y4H2 1338 aa37.82■■■■□ 3.64
CSNK1E-206ENST00000413574 MED23Q9ULK4 1368 aa37.82■■■■□ 3.64
CSNK1E-206ENST00000413574 TIAM2Q8IVF5 1701 aa37.82■■■■□ 3.64
CSNK1E-206ENST00000413574 DOK7Q18PE1 504 aa37.81■■■■□ 3.64
CSNK1E-206ENST00000413574 DCTPP1Q9H773 170 aa37.81■■■■□ 3.64
CSNK1E-206ENST00000413574 HDAC1Q13547 482 aaPredicted RBP37.79■■■■□ 3.64
CSNK1E-206ENST00000413574 ATP2B3Q16720 1220 aa37.79■■■■□ 3.64
CSNK1E-206ENST00000413574 HSP90AB4PQ58FF6 505 aa37.79■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms