RNA–Protein interactions for RNA: ENST00000410092.7

SPIRE1-203, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-203ENST00000410092 ZC3H12CQ9C0D7 883 aaKnown RBP28.07■■■□□ 2.08
SPIRE1-203ENST00000410092 TSPYL6Q8N831 410 aa28.07■■■□□ 2.08
SPIRE1-203ENST00000410092 PHACTR3Q96KR7 559 aa28.07■■■□□ 2.08
SPIRE1-203ENST00000410092 RNF113AO15541 343 aaKnown RBP28.07■■■□□ 2.08
SPIRE1-203ENST00000410092 CEP85Q6P2H3 762 aa28.07■■■□□ 2.08
SPIRE1-203ENST00000410092 GSDMDP57764 484 aa28.06■■■□□ 2.08
SPIRE1-203ENST00000410092 NMIQ13287 307 aaPredicted RBP28.06■■■□□ 2.08
SPIRE1-203ENST00000410092 NECAB1Q8N987 351 aa28.06■■■□□ 2.08
SPIRE1-203ENST00000410092 PKNOX2Q96KN3 472 aa28.06■■■□□ 2.08
SPIRE1-203ENST00000410092 CASQ1P31415 396 aa28.06■■■□□ 2.08
SPIRE1-203ENST00000410092 RMND1Q9NWS8 449 aa28.06■■■□□ 2.08
SPIRE1-203ENST00000410092 PICALMQ13492 652 aa28.05■■■□□ 2.08
SPIRE1-203ENST00000410092 TCERG1LQ5VWI1 586 aa28.05■■■□□ 2.08
SPIRE1-203ENST00000410092 DCTPP1Q9H773 170 aa28.05■■■□□ 2.08
SPIRE1-203ENST00000410092 BTG4Q9NY30 223 aa28.05■■■□□ 2.08
SPIRE1-203ENST00000410092 PPFIA3O75145 1194 aa28.05■■■□□ 2.08
SPIRE1-203ENST00000410092 KIF4BQ2VIQ3 1234 aa28.05■■■□□ 2.08
SPIRE1-203ENST00000410092 TBCAO75347 108 aaKnown RBP28.05■■■□□ 2.08
SPIRE1-203ENST00000410092 SYCP3Q8IZU3 236 aa28.05■■■□□ 2.08
SPIRE1-203ENST00000410092 KIF18AQ8NI77 898 aa28.05■■■□□ 2.08
SPIRE1-203ENST00000410092 Q6ZUG5 572 aa28.05■■■□□ 2.08
SPIRE1-203ENST00000410092 CPLX3Q8WVH0 158 aa28.05■■■□□ 2.08
SPIRE1-203ENST00000410092 DDX21Q9NR30 783 aaKnown RBP eCLIP28.04■■■□□ 2.08
SPIRE1-203ENST00000410092 BABAM1Q9NWV8 329 aa28.04■■■□□ 2.08
SPIRE1-203ENST00000410092 LRRC2Q9BYS8 371 aa28.04■■■□□ 2.08
SPIRE1-203ENST00000410092 CALM1P0DP23 149 aa28.04■■■□□ 2.08
SPIRE1-203ENST00000410092 CALM2P0DP24 149 aa28.04■■■□□ 2.08
SPIRE1-203ENST00000410092 CALM3P0DP25 149 aa28.04■■■□□ 2.08
SPIRE1-203ENST00000410092 MYCNP04198 464 aaPredicted RBP28.04■■■□□ 2.08
SPIRE1-203ENST00000410092 USP25Q9UHP3 1055 aa28.03■■■□□ 2.08
SPIRE1-203ENST00000410092 MAST1Q9Y2H9 1570 aa28.03■■■□□ 2.08
SPIRE1-203ENST00000410092 SBNO1A3KN83 1393 aa28.03■■■□□ 2.08
SPIRE1-203ENST00000410092 EYA3Q99504 573 aa28.03■■■□□ 2.08
SPIRE1-203ENST00000410092 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.03■■■□□ 2.08
SPIRE1-203ENST00000410092 UHRF1BP1Q6BDS2 1440 aa28.03■■■□□ 2.08
SPIRE1-203ENST00000410092 KIAA0754O94854 1291 aa28.03■■■□□ 2.08
SPIRE1-203ENST00000410092 KCNG4Q8TDN1 519 aa28.03■■■□□ 2.08
SPIRE1-203ENST00000410092 RBM27Q9P2N5 1060 aaKnown RBP28.03■■■□□ 2.08
SPIRE1-203ENST00000410092 EDC4Q6P2E9 1401 aaKnown RBP28.03■■■□□ 2.08
SPIRE1-203ENST00000410092 EXOC1Q9NV70 894 aa28.02■■■□□ 2.08
SPIRE1-203ENST00000410092 SYKP43405 635 aa28.02■■■□□ 2.08
SPIRE1-203ENST00000410092 HEATR3Q7Z4Q2 680 aa28.02■■■□□ 2.08
SPIRE1-203ENST00000410092 CCDC102AQ96A19 550 aa28.02■■■□□ 2.08
SPIRE1-203ENST00000410092 RTL9Q8NET4 1388 aa28.02■■■□□ 2.08
SPIRE1-203ENST00000410092 PRC1O43663 620 aa28.02■■■□□ 2.08
SPIRE1-203ENST00000410092 EZRP15311 586 aaKnown RBP28.02■■■□□ 2.08
SPIRE1-203ENST00000410092 POLD1P28340 1107 aa28.02■■■□□ 2.08
SPIRE1-203ENST00000410092 NSFL1CQ9UNZ2 370 aaKnown RBP28.02■■■□□ 2.08
SPIRE1-203ENST00000410092 TFCP2Q12800 502 aa28.02■■■□□ 2.08
SPIRE1-203ENST00000410092 DNMT1P26358 1616 aaKnown RBP28.01■■■□□ 2.07
SPIRE1-203ENST00000410092 ZNF165P49910 485 aa28.01■■■□□ 2.07
SPIRE1-203ENST00000410092 ATP7AQ04656 1500 aa28.01■■■□□ 2.07
SPIRE1-203ENST00000410092 KRT24Q2M2I5 525 aa28.01■■■□□ 2.07
SPIRE1-203ENST00000410092 TRMT1LQ7Z2T5 733 aaKnown RBP28.01■■■□□ 2.07
SPIRE1-203ENST00000410092 NBPF14Q5TI25 921 aa28■■■□□ 2.07
SPIRE1-203ENST00000410092 C16orf71Q8IYS4 520 aaPredicted RBP28■■■□□ 2.07
SPIRE1-203ENST00000410092 PAFAH1B1P43034 410 aa28■■■□□ 2.07
SPIRE1-203ENST00000410092 TCEANC2Q96MN5 208 aa28■■■□□ 2.07
SPIRE1-203ENST00000410092 TMC6Q7Z403 805 aa28■■■□□ 2.07
SPIRE1-203ENST00000410092 GOLGA6L7A0A1B0GV03 622 aa27.99■■■□□ 2.07
SPIRE1-203ENST00000410092 CRACR2AQ9BSW2 395 aa27.99■■■□□ 2.07
SPIRE1-203ENST00000410092 URI1O94763 535 aaPredicted RBP27.99■■■□□ 2.07
SPIRE1-203ENST00000410092 MCM3P25205 808 aa27.99■■■□□ 2.07
SPIRE1-203ENST00000410092 LUZP1Q86V48 1076 aa27.99■■■□□ 2.07
SPIRE1-203ENST00000410092 TRAPPC3LQ5T215 181 aa27.99■■■□□ 2.07
SPIRE1-203ENST00000410092 NAPAP54920 295 aa27.98■■■□□ 2.07
SPIRE1-203ENST00000410092 HELBQ8NG08 1087 aaPredicted RBP27.98■■■□□ 2.07
SPIRE1-203ENST00000410092 MAGEB6Q8N7X4 407 aa27.98■■■□□ 2.07
SPIRE1-203ENST00000410092 RAD50Q92878 1312 aa27.98■■■□□ 2.07
SPIRE1-203ENST00000410092 MAP9Q49MG5 647 aa27.98■■■□□ 2.07
SPIRE1-203ENST00000410092 KLHL40Q2TBA0 621 aa27.98■■■□□ 2.07
SPIRE1-203ENST00000410092 UVSSAQ2YD98 709 aa27.98■■■□□ 2.07
SPIRE1-203ENST00000410092 BICC1Q9H694 974 aaKnown RBP27.98■■■□□ 2.07
SPIRE1-203ENST00000410092 ALS2CR12Q96Q35 445 aa27.97■■■□□ 2.07
SPIRE1-203ENST00000410092 TMCO3Q6UWJ1 677 aa27.97■■■□□ 2.07
SPIRE1-203ENST00000410092 RBM17Q96I25 401 aaKnown RBP27.97■■■□□ 2.07
SPIRE1-203ENST00000410092 TRIM47Q96LD4 638 aa27.97■■■□□ 2.07
SPIRE1-203ENST00000410092 MCM9Q9NXL9 1143 aa27.97■■■□□ 2.07
SPIRE1-203ENST00000410092 COL17A1Q9UMD9 1497 aaPredicted RBP27.97■■■□□ 2.07
SPIRE1-203ENST00000410092 GNPATO15228 680 aa27.97■■■□□ 2.07
SPIRE1-203ENST00000410092 LDHBP07195 334 aaKnown RBP27.97■■■□□ 2.07
SPIRE1-203ENST00000410092 STAT6P42226 847 aa27.97■■■□□ 2.07
SPIRE1-203ENST00000410092 PARP10Q53GL7 1025 aa27.97■■■□□ 2.07
SPIRE1-203ENST00000410092 C6orf50Q9HD87 102 aa27.97■■■□□ 2.07
SPIRE1-203ENST00000410092 KIF21AQ7Z4S6 1674 aa27.97■■■□□ 2.07
SPIRE1-203ENST00000410092 PLBD2Q8NHP8 589 aa27.96■■■□□ 2.07
SPIRE1-203ENST00000410092 JDP2Q8WYK2 163 aa27.96■■■□□ 2.07
SPIRE1-203ENST00000410092 ZBTB40Q9NUA8 1239 aa27.96■■■□□ 2.07
SPIRE1-203ENST00000410092 ZNF790Q6PG37 636 aa27.96■■■□□ 2.07
SPIRE1-203ENST00000410092 SMARCC2Q8TAQ2 1214 aa27.96■■■□□ 2.07
SPIRE1-203ENST00000410092 HOXB7P09629 217 aa27.96■■■□□ 2.07
SPIRE1-203ENST00000410092 USP8P40818 1118 aa27.96■■■□□ 2.07
SPIRE1-203ENST00000410092 FERMT2Q96AC1 680 aa27.96■■■□□ 2.07
SPIRE1-203ENST00000410092 CALML3P27482 149 aa27.95■■■□□ 2.07
SPIRE1-203ENST00000410092 CCDC174Q6PII3 467 aa27.95■■■□□ 2.07
SPIRE1-203ENST00000410092 PDCL2Q8N4E4 241 aa27.95■■■□□ 2.07
SPIRE1-203ENST00000410092 PZPP20742 1482 aa27.95■■■□□ 2.06
SPIRE1-203ENST00000410092 BICD1Q96G01 975 aa27.95■■■□□ 2.06
SPIRE1-203ENST00000410092 VEZTQ9HBM0 779 aa27.94■■■□□ 2.06
SPIRE1-203ENST00000410092 GOLGA6L9A6NEM1 432 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms