RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 HIRAP54198 1017 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-210ENST00000409954 DOK7Q18PE1 504 aa18.59■□□□□ 0.57
MCF2L-210ENST00000409954 H7C1W4 665 aa18.58■□□□□ 0.56
MCF2L-210ENST00000409954 TRAF5O00463 557 aa18.58■□□□□ 0.56
MCF2L-210ENST00000409954 VIL1P09327 827 aaKnown RBP18.58■□□□□ 0.56
MCF2L-210ENST00000409954 CTCFP49711 727 aaPredicted RBP18.58■□□□□ 0.56
MCF2L-210ENST00000409954 MICALL2Q8IY33 904 aa18.58■□□□□ 0.56
MCF2L-210ENST00000409954 TTLL11Q8NHH1 800 aa18.58■□□□□ 0.56
MCF2L-210ENST00000409954 PRDM10Q9NQV6 1147 aa18.58■□□□□ 0.56
MCF2L-210ENST00000409954 ZBTB12Q9Y330 459 aaPredicted RBP18.58■□□□□ 0.56
MCF2L-210ENST00000409954 TLL2Q9Y6L7 1015 aa18.58■□□□□ 0.56
MCF2L-210ENST00000409954 NEURL1BA8MQ27 555 aa18.57■□□□□ 0.56
MCF2L-210ENST00000409954 VAMP4O75379 141 aa18.57■□□□□ 0.56
MCF2L-210ENST00000409954 UFL1O94874 794 aa18.57■□□□□ 0.56
MCF2L-210ENST00000409954 ATP2B4P23634 1241 aa18.57■□□□□ 0.56
MCF2L-210ENST00000409954 CTSWP56202 376 aa18.57■□□□□ 0.56
MCF2L-210ENST00000409954 FMR1Q06787 632 aaKnown RBP eCLIP18.57■□□□□ 0.56
MCF2L-210ENST00000409954 G2E3Q7L622 706 aa18.57■□□□□ 0.56
MCF2L-210ENST00000409954 BSDC1Q9NW68 430 aaPredicted RBP18.57■□□□□ 0.56
MCF2L-210ENST00000409954 XDHP47989 1333 aa18.56■□□□□ 0.56
MCF2L-210ENST00000409954 FOXN1O15353 648 aa18.56■□□□□ 0.56
MCF2L-210ENST00000409954 FLIIQ13045 1269 aa18.56■□□□□ 0.56
MCF2L-210ENST00000409954 HHIPL1Q96JK4 782 aa18.56■□□□□ 0.56
MCF2L-210ENST00000409954 CCDC85AQ96PX6 553 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-210ENST00000409954 KCNQ5Q9NR82 932 aa18.56■□□□□ 0.56
MCF2L-210ENST00000409954 LAMB2P55268 1798 aa18.55■□□□□ 0.56
MCF2L-210ENST00000409954 LTBP1Q14766 1721 aa18.55■□□□□ 0.56
MCF2L-210ENST00000409954 CELF2O95319 508 aaKnown RBP18.55■□□□□ 0.56
MCF2L-210ENST00000409954 CWF19L2Q2TBE0 894 aaKnown RBP18.55■□□□□ 0.56
MCF2L-210ENST00000409954 PODNQ7Z5L7 613 aa18.55■□□□□ 0.56
MCF2L-210ENST00000409954 TRPM4Q8TD43 1214 aa18.55■□□□□ 0.56
MCF2L-210ENST00000409954 CAPNS2Q96L46 248 aa18.55■□□□□ 0.56
MCF2L-210ENST00000409954 GPR101Q96P66 508 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-210ENST00000409954 GLIS2Q9BZE0 524 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-210ENST00000409954 MYH16Q9H6N6 1097 aa18.55■□□□□ 0.56
MCF2L-210ENST00000409954 SALL2Q9Y467 1007 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-210ENST00000409954 MAP2K2P36507 400 aa18.54■□□□□ 0.56
MCF2L-210ENST00000409954 FKBP5Q13451 457 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-210ENST00000409954 GCKRQ14397 625 aa18.54■□□□□ 0.56
MCF2L-210ENST00000409954 SAMD7Q7Z3H4 446 aa18.54■□□□□ 0.56
MCF2L-210ENST00000409954 SAPCD2Q86UD0 394 aa18.54■□□□□ 0.56
MCF2L-210ENST00000409954 AGBL3Q8NEM8 1001 aa18.54■□□□□ 0.56
MCF2L-210ENST00000409954 LINS1Q8NG48 757 aa18.54■□□□□ 0.56
MCF2L-210ENST00000409954 DNAAF4Q8WXU2 420 aa18.54■□□□□ 0.56
MCF2L-210ENST00000409954 PLA2G12BQ9BX93 195 aa18.54■□□□□ 0.56
MCF2L-210ENST00000409954 MINPP1Q9UNW1 487 aa18.54■□□□□ 0.56
MCF2L-210ENST00000409954 FANCIQ9NVI1 1328 aa18.53■□□□□ 0.56
MCF2L-210ENST00000409954 PAXIP1Q6ZW49 1069 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-210ENST00000409954 USP48Q86UV5 1035 aa18.53■□□□□ 0.56
MCF2L-210ENST00000409954 DDX60Q8IY21 1712 aaKnown RBP18.53■□□□□ 0.56
MCF2L-210ENST00000409954 DCPSQ96C86 337 aaKnown RBP18.53■□□□□ 0.56
MCF2L-210ENST00000409954 BEGAINQ9BUH8 593 aa18.53■□□□□ 0.56
MCF2L-210ENST00000409954 SHTN1A0MZ66 631 aa18.52■□□□□ 0.56
MCF2L-210ENST00000409954 IGHMBP2P38935 993 aaKnown RBP18.52■□□□□ 0.56
MCF2L-210ENST00000409954 EXOSC9Q06265 439 aaKnown RBP18.52■□□□□ 0.56
MCF2L-210ENST00000409954 TBC1D10BQ4KMP7 808 aaPredicted RBP18.52■□□□□ 0.56
MCF2L-210ENST00000409954 RBM26Q5T8P6 1007 aaKnown RBP18.52■□□□□ 0.56
MCF2L-210ENST00000409954 UBE3BQ7Z3V4 1068 aa18.52■□□□□ 0.56
MCF2L-210ENST00000409954 GREM2Q9H772 168 aa18.52■□□□□ 0.56
MCF2L-210ENST00000409954 LEMD3Q9Y2U8 911 aa18.52■□□□□ 0.56
MCF2L-210ENST00000409954 RTL9Q8NET4 1388 aa18.52■□□□□ 0.55
MCF2L-210ENST00000409954 DUOX1Q9NRD9 1551 aa18.51■□□□□ 0.55
MCF2L-210ENST00000409954 CSF1RP07333 972 aa18.51■□□□□ 0.55
MCF2L-210ENST00000409954 CYP4F22Q6NT55 531 aa18.51■□□□□ 0.55
MCF2L-210ENST00000409954 RSBN1LQ6PCB5 846 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-210ENST00000409954 KRT26Q7Z3Y9 468 aa18.51■□□□□ 0.55
MCF2L-210ENST00000409954 TAF1P21675 1872 aa18.51■□□□□ 0.55
MCF2L-210ENST00000409954 LRRC37AA6NMS7 1700 aa18.5■□□□□ 0.55
MCF2L-210ENST00000409954 USP17L3A6NCW0 530 aa18.5■□□□□ 0.55
MCF2L-210ENST00000409954 USP17L4A6NCW7 530 aa18.5■□□□□ 0.55
MCF2L-210ENST00000409954 USP17L1Q7RTZ2 530 aa18.5■□□□□ 0.55
MCF2L-210ENST00000409954 FAM9BQ8IZU0 186 aa18.5■□□□□ 0.55
MCF2L-210ENST00000409954 ANKRD2Q9GZV1 360 aa18.5■□□□□ 0.55
MCF2L-210ENST00000409954 CCT4P50991 539 aaKnown RBP18.49■□□□□ 0.55
MCF2L-210ENST00000409954 LBX1P52954 281 aa18.49■□□□□ 0.55
MCF2L-210ENST00000409954 ZNF280AP59817 542 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-210ENST00000409954 MPHOSPH8Q99549 860 aa18.49■□□□□ 0.55
MCF2L-210ENST00000409954 ZNF408Q9H9D4 720 aa18.49■□□□□ 0.55
MCF2L-210ENST00000409954 ITGA6P23229 1130 aa18.48■□□□□ 0.55
MCF2L-210ENST00000409954 MMP14P50281 582 aa18.48■□□□□ 0.55
MCF2L-210ENST00000409954 CASP7P55210 303 aa18.48■□□□□ 0.55
MCF2L-210ENST00000409954 GRM1Q13255 1194 aa18.48■□□□□ 0.55
MCF2L-210ENST00000409954 KIF4BQ2VIQ3 1234 aa18.48■□□□□ 0.55
MCF2L-210ENST00000409954 C2orf69Q8N8R5 385 aa18.48■□□□□ 0.55
MCF2L-210ENST00000409954 COA1Q9GZY4 146 aa18.48■□□□□ 0.55
MCF2L-210ENST00000409954 PCNTO95613 3336 aa18.48■□□□□ 0.55
MCF2L-210ENST00000409954 USP17L8P0C7I0 530 aa18.47■□□□□ 0.55
MCF2L-210ENST00000409954 SULF1Q8IWU6 871 aa18.47■□□□□ 0.55
MCF2L-210ENST00000409954 GMLQ99445 158 aa18.47■□□□□ 0.55
MCF2L-210ENST00000409954 CA12O43570 354 aa18.46■□□□□ 0.55
MCF2L-210ENST00000409954 EGFRP00533 1210 aa18.46■□□□□ 0.55
MCF2L-210ENST00000409954 HSPA8P11142 646 aaKnown RBP18.46■□□□□ 0.55
MCF2L-210ENST00000409954 SPINK5Q9NQ38 1064 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-210ENST00000409954 MED23Q9ULK4 1368 aa18.45■□□□□ 0.54
MCF2L-210ENST00000409954 ANKRD18BA2A2Z9 1011 aa18.45■□□□□ 0.54
MCF2L-210ENST00000409954 HUNKP57058 714 aa18.45■□□□□ 0.54
MCF2L-210ENST00000409954 SCARF1Q14162 830 aa18.45■□□□□ 0.54
MCF2L-210ENST00000409954 BEND3Q5T5X7 828 aa18.45■□□□□ 0.54
MCF2L-210ENST00000409954 STRIP1Q5VSL9 837 aa18.45■□□□□ 0.54
MCF2L-210ENST00000409954 OGFOD1Q8N543 542 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms