RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 UQCRFS1P1P0C7P4 283 aa18.12■□□□□ 0.49
SSFA2-202ENST00000409001 UBA5Q9GZZ9 404 aa18.12■□□□□ 0.49
SSFA2-202ENST00000409001 LMBRD1Q9NUN5 540 aa18.12■□□□□ 0.49
SSFA2-202ENST00000409001 SNX14Q9Y5W7 946 aa18.12■□□□□ 0.49
SSFA2-202ENST00000409001 HOXC9P31274 260 aa18.12■□□□□ 0.49
SSFA2-202ENST00000409001 DHX37Q8IY37 1157 aaKnown RBP18.12■□□□□ 0.49
SSFA2-202ENST00000409001 RAB34Q9BZG1 259 aa18.12■□□□□ 0.49
SSFA2-202ENST00000409001 VAT1LQ9HCJ6 419 aa18.12■□□□□ 0.49
SSFA2-202ENST00000409001 SGSM2O43147 1006 aa18.11■□□□□ 0.49
SSFA2-202ENST00000409001 ZNF445P59923 1031 aa18.11■□□□□ 0.49
SSFA2-202ENST00000409001 RNF216Q9NWF9 866 aaPredicted RBP18.11■□□□□ 0.49
SSFA2-202ENST00000409001 FBXO3Q9UK99 471 aa18.11■□□□□ 0.49
SSFA2-202ENST00000409001 ABCC10Q5T3U5 1492 aa18.11■□□□□ 0.49
SSFA2-202ENST00000409001 KRT222Q8N1A0 295 aa18.11■□□□□ 0.49
SSFA2-202ENST00000409001 TSG101Q99816 390 aa18.11■□□□□ 0.49
SSFA2-202ENST00000409001 ADAMTS2O95450 1211 aa18.11■□□□□ 0.49
SSFA2-202ENST00000409001 KLHDC4Q8TBB5 520 aa18.11■□□□□ 0.49
SSFA2-202ENST00000409001 RTN1Q16799 776 aa18.11■□□□□ 0.49
SSFA2-202ENST00000409001 CALCOCO1Q9P1Z2 691 aa18.11■□□□□ 0.49
SSFA2-202ENST00000409001 CDC5LQ99459 802 aaKnown RBP18.1■□□□□ 0.49
SSFA2-202ENST00000409001 SBNO2Q9Y2G9 1366 aa18.1■□□□□ 0.49
SSFA2-202ENST00000409001 KIF5BP33176 963 aa18.1■□□□□ 0.49
SSFA2-202ENST00000409001 NBPF7P0C2Y1 421 aaPredicted RBP18.1■□□□□ 0.49
SSFA2-202ENST00000409001 GADD45BO75293 160 aaPredicted RBP18.1■□□□□ 0.49
SSFA2-202ENST00000409001 GSPT1P15170 499 aaKnown RBP18.1■□□□□ 0.49
SSFA2-202ENST00000409001 TMEM266Q2M3C6 531 aa18.1■□□□□ 0.49
SSFA2-202ENST00000409001 ZCRB1Q8TBF4 217 aaKnown RBP18.09■□□□□ 0.49
SSFA2-202ENST00000409001 RNF113AO15541 343 aaKnown RBP18.09■□□□□ 0.49
SSFA2-202ENST00000409001 FAM227BQ96M60 508 aa18.09■□□□□ 0.49
SSFA2-202ENST00000409001 IFNKQ9P0W0 207 aa18.09■□□□□ 0.49
SSFA2-202ENST00000409001 RAD50Q92878 1312 aa18.09■□□□□ 0.49
SSFA2-202ENST00000409001 SLU7O95391 586 aaKnown RBP18.09■□□□□ 0.49
SSFA2-202ENST00000409001 RXRAP19793 462 aa18.09■□□□□ 0.49
SSFA2-202ENST00000409001 CCDC96Q2M329 555 aa18.09■□□□□ 0.49
SSFA2-202ENST00000409001 DDX21Q9NR30 783 aaKnown RBP eCLIP18.09■□□□□ 0.49
SSFA2-202ENST00000409001 STX8Q9UNK0 236 aa18.09■□□□□ 0.49
SSFA2-202ENST00000409001 SLC4A4Q9Y6R1 1079 aa18.09■□□□□ 0.49
SSFA2-202ENST00000409001 CCDC129Q6ZRS4 1044 aa18.09■□□□□ 0.49
SSFA2-202ENST00000409001 KRT23Q9C075 422 aa18.09■□□□□ 0.49
SSFA2-202ENST00000409001 TMEM63CQ9P1W3 806 aa18.09■□□□□ 0.49
SSFA2-202ENST00000409001 A0A1B0GVL5 298 aa18.08■□□□□ 0.49
SSFA2-202ENST00000409001 PPP1R12BO60237 982 aaPredicted RBP18.08■□□□□ 0.49
SSFA2-202ENST00000409001 GCP02774 474 aa18.08■□□□□ 0.49
SSFA2-202ENST00000409001 LIG1P18858 919 aa18.08■□□□□ 0.49
SSFA2-202ENST00000409001 CYP7A1P22680 504 aa18.08■□□□□ 0.49
SSFA2-202ENST00000409001 TIMM10P62072 90 aa18.08■□□□□ 0.49
SSFA2-202ENST00000409001 CRACR2BQ8N4Y2 399 aaPredicted RBP18.08■□□□□ 0.49
SSFA2-202ENST00000409001 USP19O94966 1318 aa18.08■□□□□ 0.49
SSFA2-202ENST00000409001 FGFR1OPO95684 399 aaKnown RBP18.08■□□□□ 0.48
SSFA2-202ENST00000409001 MCM3P25205 808 aa18.08■□□□□ 0.48
SSFA2-202ENST00000409001 LMAN1P49257 510 aa18.08■□□□□ 0.48
SSFA2-202ENST00000409001 PDE4BQ07343 736 aa18.08■□□□□ 0.48
SSFA2-202ENST00000409001 RRAGBQ5VZM2 374 aa18.08■□□□□ 0.48
SSFA2-202ENST00000409001 CABLES1Q8TDN4 633 aa18.08■□□□□ 0.48
SSFA2-202ENST00000409001 TRIM47Q96LD4 638 aa18.08■□□□□ 0.48
SSFA2-202ENST00000409001 KAT14Q9H8E8 782 aa18.08■□□□□ 0.48
SSFA2-202ENST00000409001 C17orf53Q8N3J3 647 aaPredicted RBP18.08■□□□□ 0.48
SSFA2-202ENST00000409001 SMARCC1Q92922 1105 aaPredicted RBP18.08■□□□□ 0.48
SSFA2-202ENST00000409001 MAGI2Q86UL8 1455 aa18.08■□□□□ 0.48
SSFA2-202ENST00000409001 TRMT2AQ8IZ69 625 aaKnown RBP18.08■□□□□ 0.48
SSFA2-202ENST00000409001 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.08■□□□□ 0.48
SSFA2-202ENST00000409001 MATR3P43243 847 aaKnown RBP eCLIP18.07■□□□□ 0.484e-10■□□□□ 8.4
SSFA2-202ENST00000409001 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.07■□□□□ 0.48
SSFA2-202ENST00000409001 JADE2Q9NQC1 790 aa18.07■□□□□ 0.48
SSFA2-202ENST00000409001 SHTN1A0MZ66 631 aa18.07■□□□□ 0.48
SSFA2-202ENST00000409001 IGSF3O75054 1194 aa18.07■□□□□ 0.48
SSFA2-202ENST00000409001 ESR2Q92731 530 aa18.07■□□□□ 0.48
SSFA2-202ENST00000409001 RNMTO43148 476 aaKnown RBP18.07■□□□□ 0.48
SSFA2-202ENST00000409001 PIP4K2BP78356 416 aa18.07■□□□□ 0.48
SSFA2-202ENST00000409001 HELBQ8NG08 1087 aaPredicted RBP18.07■□□□□ 0.48
SSFA2-202ENST00000409001 SLC27A2O14975 620 aa18.07■□□□□ 0.48
SSFA2-202ENST00000409001 RPS6KB1P23443 525 aa18.07■□□□□ 0.48
SSFA2-202ENST00000409001 TMTC2Q8N394 836 aa18.07■□□□□ 0.48
SSFA2-202ENST00000409001 ARFGAP3Q9NP61 516 aa18.07■□□□□ 0.48
SSFA2-202ENST00000409001 TRIM21P19474 475 aaKnown RBP18.06■□□□□ 0.48
SSFA2-202ENST00000409001 AEBP2Q6ZN18 517 aaPredicted RBP18.06■□□□□ 0.48
SSFA2-202ENST00000409001 CALML4Q96GE6 196 aa18.06■□□□□ 0.48
SSFA2-202ENST00000409001 KAT6BQ8WYB5 2073 aa18.06■□□□□ 0.48
SSFA2-202ENST00000409001 POTEB2H3BUK9 544 aa18.06■□□□□ 0.48
SSFA2-202ENST00000409001 DHX58Q96C10 678 aa18.06■□□□□ 0.48
SSFA2-202ENST00000409001 CNNM2Q9H8M5 875 aa18.06■□□□□ 0.48
SSFA2-202ENST00000409001 VPS36Q86VN1 386 aa18.06■□□□□ 0.48
SSFA2-202ENST00000409001 LGR6Q9HBX8 967 aa18.06■□□□□ 0.48
SSFA2-202ENST00000409001 PKP1Q13835 747 aa18.06■□□□□ 0.48
SSFA2-202ENST00000409001 MCM6Q14566 821 aa18.06■□□□□ 0.48
SSFA2-202ENST00000409001 SEPT7Q16181 437 aaKnown RBP18.06■□□□□ 0.48
SSFA2-202ENST00000409001 CCDC178Q5BJE1 867 aa18.06■□□□□ 0.48
SSFA2-202ENST00000409001 CCDC40Q4G0X9 1142 aa18.05■□□□□ 0.48
SSFA2-202ENST00000409001 IFIT1BQ5T764 474 aaKnown RBP18.05■□□□□ 0.48
SSFA2-202ENST00000409001 CADPS2Q86UW7 1296 aa18.05■□□□□ 0.48
SSFA2-202ENST00000409001 DBNDD2Q9BQY9 259 aa18.05■□□□□ 0.48
SSFA2-202ENST00000409001 AKR1B10O60218 316 aa18.05■□□□□ 0.48
SSFA2-202ENST00000409001 KCNA6P17658 529 aa18.05■□□□□ 0.48
SSFA2-202ENST00000409001 AMPD3Q01432 767 aa18.05■□□□□ 0.48
SSFA2-202ENST00000409001 IP6K1Q92551 441 aa18.05■□□□□ 0.48
SSFA2-202ENST00000409001 MAST1Q9Y2H9 1570 aa18.05■□□□□ 0.48
SSFA2-202ENST00000409001 USP8P40818 1118 aa18.04■□□□□ 0.48
SSFA2-202ENST00000409001 STX17P56962 302 aa18.04■□□□□ 0.48
SSFA2-202ENST00000409001 HLTFQ14527 1009 aaKnown RBP eCLIP18.04■□□□□ 0.48
SSFA2-202ENST00000409001 SYT10Q6XYQ8 523 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms