RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 CCDC91Q7Z6B0 441 aa18.92■□□□□ 0.62
CBX6-202ENST00000407418 RHPN1Q8TCX5 695 aa18.92■□□□□ 0.62
CBX6-202ENST00000407418 MCM9Q9NXL9 1143 aa18.92■□□□□ 0.62
CBX6-202ENST00000407418 ORC3Q9UBD5 711 aaPredicted RBP18.92■□□□□ 0.62
CBX6-202ENST00000407418 NOD1Q9Y239 953 aa18.92■□□□□ 0.62
CBX6-202ENST00000407418 PHACTR2O75167 634 aa18.92■□□□□ 0.62
CBX6-202ENST00000407418 TAF12Q16514 161 aa18.92■□□□□ 0.62
CBX6-202ENST00000407418 MTHFSDQ2M296 383 aaKnown RBP18.92■□□□□ 0.62
CBX6-202ENST00000407418 ZNF772Q68DY9 489 aaPredicted RBP18.92■□□□□ 0.62
CBX6-202ENST00000407418 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.92■□□□□ 0.62
CBX6-202ENST00000407418 RBM27Q9P2N5 1060 aaKnown RBP18.92■□□□□ 0.62
CBX6-202ENST00000407418 LRSAM1Q6UWE0 723 aa18.92■□□□□ 0.62
CBX6-202ENST00000407418 DPP8Q6V1X1 898 aaPredicted RBP18.92■□□□□ 0.62
CBX6-202ENST00000407418 EXOC1Q9NV70 894 aa18.92■□□□□ 0.62
CBX6-202ENST00000407418 ZBTB43O43298 467 aa18.92■□□□□ 0.62
CBX6-202ENST00000407418 FAM177A1Q8N128 213 aaPredicted RBP18.92■□□□□ 0.62
CBX6-202ENST00000407418 CTNNBL1Q8WYA6 563 aaPredicted RBP18.92■□□□□ 0.62
CBX6-202ENST00000407418 IVNS1ABPQ9Y6Y0 642 aa18.92■□□□□ 0.62
CBX6-202ENST00000407418 PUS7Q96PZ0 661 aaKnown RBP18.91■□□□□ 0.62
CBX6-202ENST00000407418 KIAA0754O94854 1291 aa18.91■□□□□ 0.62
CBX6-202ENST00000407418 CCDC172P0C7W6 258 aa18.91■□□□□ 0.62
CBX6-202ENST00000407418 CFAP74Q9C0B2 1584 aa18.91■□□□□ 0.62
CBX6-202ENST00000407418 ALDH1B1P30837 517 aa18.91■□□□□ 0.62
CBX6-202ENST00000407418 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
CBX6-202ENST00000407418 HOOK3Q86VS8 718 aa18.91■□□□□ 0.62
CBX6-202ENST00000407418 SYNCQ9H7C4 482 aa18.91■□□□□ 0.62
CBX6-202ENST00000407418 PRKCSHP14314 528 aaPredicted RBP18.9■□□□□ 0.62
CBX6-202ENST00000407418 TDRD12Q587J7 1177 aaKnown RBP18.9■□□□□ 0.62
CBX6-202ENST00000407418 ARHGEF10LQ9HCE6 1279 aa18.9■□□□□ 0.62
CBX6-202ENST00000407418 KRT13P13646 458 aa18.9■□□□□ 0.62
CBX6-202ENST00000407418 RMND1Q9NWS8 449 aa18.9■□□□□ 0.62
CBX6-202ENST00000407418 CAMK4Q16566 473 aa18.9■□□□□ 0.62
CBX6-202ENST00000407418 GRPEL1Q9HAV7 217 aa18.9■□□□□ 0.62
CBX6-202ENST00000407418 MCMDC2Q4G0Z9 681 aa18.9■□□□□ 0.62
CBX6-202ENST00000407418 EAPPQ56P03 285 aaPredicted RBP18.9■□□□□ 0.62
CBX6-202ENST00000407418 ZNF710Q8N1W2 664 aa18.9■□□□□ 0.62
CBX6-202ENST00000407418 ARHGAP45Q92619 1136 aa18.9■□□□□ 0.62
CBX6-202ENST00000407418 CENPHQ9H3R5 247 aa18.9■□□□□ 0.62
CBX6-202ENST00000407418 SSX2IPQ9Y2D8 614 aa18.9■□□□□ 0.62
CBX6-202ENST00000407418 GPHNQ9NQX3 736 aaPredicted RBP18.9■□□□□ 0.62
CBX6-202ENST00000407418 USO1O60763 962 aaKnown RBP18.89■□□□□ 0.61
CBX6-202ENST00000407418 DPY19L2Q6NUT2 758 aa18.89■□□□□ 0.61
CBX6-202ENST00000407418 MAGEB6Q8N7X4 407 aa18.89■□□□□ 0.61
CBX6-202ENST00000407418 ZFYVE16Q7Z3T8 1539 aa18.89■□□□□ 0.61
CBX6-202ENST00000407418 YEATS4O95619 227 aa18.89■□□□□ 0.61
CBX6-202ENST00000407418 ZNF354CQ86Y25 554 aa18.89■□□□□ 0.61
CBX6-202ENST00000407418 LINS1Q8NG48 757 aa18.89■□□□□ 0.61
CBX6-202ENST00000407418 PAG1Q9NWQ8 432 aa18.89■□□□□ 0.61
CBX6-202ENST00000407418 FBLN1P23142 703 aa18.89■□□□□ 0.61
CBX6-202ENST00000407418 SOS1Q07889 1333 aaPredicted RBP18.88■□□□□ 0.61
CBX6-202ENST00000407418 TBC1D5Q92609 795 aa18.88■□□□□ 0.61
CBX6-202ENST00000407418 KLF18A0A0U1RQI7 1052 aa18.88■□□□□ 0.61
CBX6-202ENST00000407418 NAP1L4Q99733 375 aaKnown RBP18.88■□□□□ 0.61
CBX6-202ENST00000407418 IMPG2Q9BZV3 1241 aa18.88■□□□□ 0.61
CBX6-202ENST00000407418 KIF22Q14807 665 aa18.88■□□□□ 0.61
CBX6-202ENST00000407418 CERS3Q8IU89 383 aa18.88■□□□□ 0.61
CBX6-202ENST00000407418 NUP88Q99567 741 aaPredicted RBP18.88■□□□□ 0.61
CBX6-202ENST00000407418 MACROD2A1Z1Q3 448 aa18.87■□□□□ 0.61
CBX6-202ENST00000407418 EIF3JO75822 258 aaKnown RBP18.87■□□□□ 0.61
CBX6-202ENST00000407418 H7C1D1 291 aa18.86■□□□□ 0.61
CBX6-202ENST00000407418 TEX11Q8IYF3 940 aa18.86■□□□□ 0.61
CBX6-202ENST00000407418 GIGYF2Q6Y7W6 1299 aaKnown RBP18.86■□□□□ 0.61
CBX6-202ENST00000407418 FSIP1Q8NA03 581 aa18.86■□□□□ 0.61
CBX6-202ENST00000407418 TNPO1Q92973 898 aaKnown RBP18.86■□□□□ 0.61
CBX6-202ENST00000407418 TCHPQ9BT92 498 aa18.86■□□□□ 0.61
CBX6-202ENST00000407418 PODXL2Q9NZ53 605 aa18.86■□□□□ 0.61
CBX6-202ENST00000407418 HIBADHP31937 336 aaKnown RBP18.86■□□□□ 0.61
CBX6-202ENST00000407418 CCDC117Q8IWD4 279 aaPredicted RBP18.86■□□□□ 0.61
CBX6-202ENST00000407418 RFX1P22670 979 aa18.86■□□□□ 0.61
CBX6-202ENST00000407418 TRPC5Q9UL62 973 aaPredicted RBP18.86■□□□□ 0.61
CBX6-202ENST00000407418 RAB3GAP1Q15042 981 aa18.85■□□□□ 0.61
CBX6-202ENST00000407418 RAB11FIP4Q86YS3 637 aa18.85■□□□□ 0.61
CBX6-202ENST00000407418 ZRANB1Q9UGI0 708 aa18.85■□□□□ 0.61
CBX6-202ENST00000407418 GOLGA6L7A0A1B0GV03 622 aa18.85■□□□□ 0.61
CBX6-202ENST00000407418 RNF113AO15541 343 aaKnown RBP18.85■□□□□ 0.61
CBX6-202ENST00000407418 GSTTP1A0A1W2PQM5 241 aa18.85■□□□□ 0.61
CBX6-202ENST00000407418 GJB2P29033 226 aa18.85■□□□□ 0.61
CBX6-202ENST00000407418 ZSCAN12O43309 604 aa18.85■□□□□ 0.61
CBX6-202ENST00000407418 LPXNO60711 386 aa18.85■□□□□ 0.61
CBX6-202ENST00000407418 TOP1P11387 765 aaKnown RBP18.85■□□□□ 0.61
CBX6-202ENST00000407418 HELBQ8NG08 1087 aaPredicted RBP18.85■□□□□ 0.61
CBX6-202ENST00000407418 EYA1Q99502 592 aa18.85■□□□□ 0.61
CBX6-202ENST00000407418 RXRBP28702 533 aa18.85■□□□□ 0.61
CBX6-202ENST00000407418 TTC16Q8NEE8 873 aa18.85■□□□□ 0.61
CBX6-202ENST00000407418 CALML3P27482 149 aa18.84■□□□□ 0.61
CBX6-202ENST00000407418 STAT6P42226 847 aa18.84■□□□□ 0.61
CBX6-202ENST00000407418 RBM25P49756 843 aaKnown RBP18.84■□□□□ 0.61
CBX6-202ENST00000407418 FILIP1Q7Z7B0 1213 aa18.84■□□□□ 0.61
CBX6-202ENST00000407418 MMRN2Q9H8L6 949 aa18.84■□□□□ 0.61
CBX6-202ENST00000407418 SH3TC1Q8TE82 1336 aa18.84■□□□□ 0.61
CBX6-202ENST00000407418 PDE8AO60658 829 aa18.84■□□□□ 0.61
CBX6-202ENST00000407418 BCS1LQ9Y276 419 aa18.84■□□□□ 0.61
CBX6-202ENST00000407418 BACH1O14867 736 aa18.84■□□□□ 0.61
CBX6-202ENST00000407418 PRIM1P49642 420 aaKnown RBP18.84■□□□□ 0.61
CBX6-202ENST00000407418 TTC22Q5TAA0 569 aa18.84■□□□□ 0.61
CBX6-202ENST00000407418 PLBD2Q8NHP8 589 aa18.84■□□□□ 0.61
CBX6-202ENST00000407418 LMAN1P49257 510 aa18.83■□□□□ 0.61
CBX6-202ENST00000407418 ATP8B2P98198 1209 aa18.83■□□□□ 0.61
CBX6-202ENST00000407418 CCDC183Q5T5S1 534 aa18.83■□□□□ 0.61
CBX6-202ENST00000407418 MIGA1Q8NAN2 632 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms