RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CYP2E1P05181 493 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P13-201ENST00000406019 CPB1P15086 417 aa8.63□□□□□ -1.03
HMGB1P13-201ENST00000406019 ALYREFQ86V81 257 aaKnown RBP8.63□□□□□ -1.03
HMGB1P13-201ENST00000406019 PLVAPQ9BX97 442 aa8.63□□□□□ -1.03
HMGB1P13-201ENST00000406019 CHRDQ9H2X0 955 aa8.63□□□□□ -1.03
HMGB1P13-201ENST00000406019 TUT1Q9H6E5 874 aaKnown RBP8.63□□□□□ -1.03
HMGB1P13-201ENST00000406019 CNTN3Q9P232 1028 aa8.63□□□□□ -1.03
HMGB1P13-201ENST00000406019 PSAPP07602 524 aa8.62□□□□□ -1.03
HMGB1P13-201ENST00000406019 HFE2Q6ZVN8 426 aa8.62□□□□□ -1.03
HMGB1P13-201ENST00000406019 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
HMGB1P13-201ENST00000406019 NUDT8Q8WV74 236 aa8.62□□□□□ -1.03
HMGB1P13-201ENST00000406019 NSUN5Q96P11 429 aaKnown RBP8.62□□□□□ -1.03
HMGB1P13-201ENST00000406019 ABI2Q9NYB9 513 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P13-201ENST00000406019 LOC102724428A0A0B4J2F2 783 aa8.61□□□□□ -1.03
HMGB1P13-201ENST00000406019 J3QW42 95 aa8.61□□□□□ -1.03
HMGB1P13-201ENST00000406019 PIK3R2O00459 728 aa8.61□□□□□ -1.03
HMGB1P13-201ENST00000406019 LILRB5O75023 590 aa8.61□□□□□ -1.03
HMGB1P13-201ENST00000406019 IGHA2P01877 340 aa8.61□□□□□ -1.03
HMGB1P13-201ENST00000406019 RPLP1P05386 114 aaKnown RBP8.61□□□□□ -1.03
HMGB1P13-201ENST00000406019 SIK1P57059 783 aa8.61□□□□□ -1.03
HMGB1P13-201ENST00000406019 JPH1Q9HDC5 661 aaPredicted RBP8.61□□□□□ -1.03
HMGB1P13-201ENST00000406019 BAG6P46379 1132 aa8.6□□□□□ -1.03
HMGB1P13-201ENST00000406019 PLA2G4EQ3MJ16 856 aa8.6□□□□□ -1.03
HMGB1P13-201ENST00000406019 NOP53Q9NZM5 478 aaKnown RBP8.6□□□□□ -1.03
HMGB1P13-201ENST00000406019 SOWAHDA6NJG2 315 aa8.59□□□□□ -1.03
HMGB1P13-201ENST00000406019 RGS9O75916 674 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P13-201ENST00000406019 ADAMTSL4Q6UY14 1074 aa8.59□□□□□ -1.03
HMGB1P13-201ENST00000406019 ZNF438Q7Z4V0 828 aa8.59□□□□□ -1.03
HMGB1P13-201ENST00000406019 C1orf127Q8N9H9 656 aa8.59□□□□□ -1.03
HMGB1P13-201ENST00000406019 SMG9Q9H0W8 520 aaKnown RBP8.59□□□□□ -1.03
HMGB1P13-201ENST00000406019 EIF2AK2P19525 551 aaKnown RBP8.58□□□□□ -1.04
HMGB1P13-201ENST00000406019 GLYCTKQ8IVS8 523 aa8.58□□□□□ -1.04
HMGB1P13-201ENST00000406019 CEP120Q8N960 986 aa8.58□□□□□ -1.04
HMGB1P13-201ENST00000406019 PLD4Q96BZ4 506 aa8.58□□□□□ -1.04
HMGB1P13-201ENST00000406019 SALL4Q9UJQ4 1053 aa8.58□□□□□ -1.04
HMGB1P13-201ENST00000406019 TNFRSF21O75509 655 aa8.57□□□□□ -1.04
HMGB1P13-201ENST00000406019 PROCP04070 461 aa8.57□□□□□ -1.04
HMGB1P13-201ENST00000406019 TTC39BQ5VTQ0 682 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P13-201ENST00000406019 ELMSAN1Q6PJG2 1045 aa8.57□□□□□ -1.04
HMGB1P13-201ENST00000406019 CCER1Q8TC90 406 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P13-201ENST00000406019 FAM129BQ96TA1 746 aa8.57□□□□□ -1.04
HMGB1P13-201ENST00000406019 A0A0A0MRY4 1105 aa8.56□□□□□ -1.04
HMGB1P13-201ENST00000406019 FAM229AH3BQW9 127 aa8.56□□□□□ -1.04
HMGB1P13-201ENST00000406019 SPATA31C1P0DKV0 1188 aa8.56□□□□□ -1.04
HMGB1P13-201ENST00000406019 USP5P45974 858 aa8.56□□□□□ -1.04
HMGB1P13-201ENST00000406019 ATP11AP98196 1134 aa8.56□□□□□ -1.04
HMGB1P13-201ENST00000406019 HYAL2Q12891 473 aa8.56□□□□□ -1.04
HMGB1P13-201ENST00000406019 C8orf34Q49A92 452 aa8.56□□□□□ -1.04
HMGB1P13-201ENST00000406019 KANSL3Q9P2N6 904 aa8.56□□□□□ -1.04
HMGB1P13-201ENST00000406019 FOXD3Q9UJU5 478 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P13-201ENST00000406019 NFKBIEO00221 500 aa8.55□□□□□ -1.04
HMGB1P13-201ENST00000406019 ACPPP15309 386 aa8.55□□□□□ -1.04
HMGB1P13-201ENST00000406019 PCSK2P16519 638 aa8.55□□□□□ -1.04
HMGB1P13-201ENST00000406019 CHRNA4P43681 627 aa8.55□□□□□ -1.04
HMGB1P13-201ENST00000406019 MSL1Q68DK7 614 aa8.55□□□□□ -1.04
HMGB1P13-201ENST00000406019 CD163Q86VB7 1156 aa8.55□□□□□ -1.04
HMGB1P13-201ENST00000406019 TRIM33Q9UPN9 1127 aa8.55□□□□□ -1.04
HMGB1P13-201ENST00000406019 TM4SF5O14894 197 aa8.54□□□□□ -1.04
HMGB1P13-201ENST00000406019 EHHADHQ08426 723 aa8.54□□□□□ -1.04
HMGB1P13-201ENST00000406019 SNX29Q8TEQ0 813 aa8.54□□□□□ -1.04
HMGB1P13-201ENST00000406019 EREGO14944 169 aa8.53□□□□□ -1.04
HMGB1P13-201ENST00000406019 DEAF1O75398 565 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P13-201ENST00000406019 GHRHP01286 108 aa8.53□□□□□ -1.04
HMGB1P13-201ENST00000406019 KCNA1Q09470 495 aa8.53□□□□□ -1.04
HMGB1P13-201ENST00000406019 DMRTC2Q8IXT2 367 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P13-201ENST00000406019 FMR1NBQ8N0W7 255 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P13-201ENST00000406019 RGS22Q8NE09 1264 aa8.53□□□□□ -1.04
HMGB1P13-201ENST00000406019 GZF1Q9H116 711 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P13-201ENST00000406019 RASSF4Q9H2L5 321 aa8.53□□□□□ -1.04
HMGB1P13-201ENST00000406019 SPDYE3A6NKU9 549 aa8.52□□□□□ -1.05
HMGB1P13-201ENST00000406019 C1QTNF9BB2RNN3 333 aa8.52□□□□□ -1.05
HMGB1P13-201ENST00000406019 PATL2C9JE40 543 aaKnown RBP8.52□□□□□ -1.05
HMGB1P13-201ENST00000406019 GPR182O15218 404 aa8.52□□□□□ -1.05
HMGB1P13-201ENST00000406019 AAMPQ13685 434 aa8.52□□□□□ -1.05
HMGB1P13-201ENST00000406019 SPOCK3Q9BQ16 436 aa8.52□□□□□ -1.05
HMGB1P13-201ENST00000406019 PBX4Q9BYU1 374 aa8.52□□□□□ -1.05
HMGB1P13-201ENST00000406019 TMCO4Q5TGY1 634 aa8.51□□□□□ -1.05
HMGB1P13-201ENST00000406019 DTWD1Q8N5C7 304 aa8.51□□□□□ -1.05
HMGB1P13-201ENST00000406019 CITED4Q96RK1 184 aa8.51□□□□□ -1.05
HMGB1P13-201ENST00000406019 RBCK1Q9BYM8 510 aa8.51□□□□□ -1.05
HMGB1P13-201ENST00000406019 DZANK1Q9NVP4 752 aa8.51□□□□□ -1.05
HMGB1P13-201ENST00000406019 BRPF3Q9ULD4 1205 aa8.51□□□□□ -1.05
HMGB1P13-201ENST00000406019 IVNS1ABPQ9Y6Y0 642 aa8.51□□□□□ -1.05
HMGB1P13-201ENST00000406019 ELNP15502 786 aa8.5□□□□□ -1.05
HMGB1P13-201ENST00000406019 SELPP16109 830 aa8.5□□□□□ -1.05
HMGB1P13-201ENST00000406019 CES1P23141 567 aa8.5□□□□□ -1.05
HMGB1P13-201ENST00000406019 PRRT3Q5FWE3 981 aa8.5□□□□□ -1.05
HMGB1P13-201ENST00000406019 TRAPPC3LQ5T215 181 aa8.5□□□□□ -1.05
HMGB1P13-201ENST00000406019 PEAR1Q5VY43 1037 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P13-201ENST00000406019 GPAT2Q6NUI2 795 aa8.5□□□□□ -1.05
HMGB1P13-201ENST00000406019 WFDC8Q8IUA0 241 aa8.5□□□□□ -1.05
HMGB1P13-201ENST00000406019 HHIPQ96QV1 700 aa8.5□□□□□ -1.05
HMGB1P13-201ENST00000406019 ZFYVE28Q9HCC9 887 aa8.5□□□□□ -1.05
HMGB1P13-201ENST00000406019 NDUFB5O43674 189 aa8.49□□□□□ -1.05
HMGB1P13-201ENST00000406019 PHACTR2O75167 634 aa8.49□□□□□ -1.05
HMGB1P13-201ENST00000406019 IGHA1P01876 353 aa8.49□□□□□ -1.05
HMGB1P13-201ENST00000406019 TRIM28Q13263 835 aaKnown RBP8.49□□□□□ -1.05
HMGB1P13-201ENST00000406019 GRIK4Q16099 956 aa8.49□□□□□ -1.05
HMGB1P13-201ENST00000406019 FBXO11Q86XK2 927 aa8.49□□□□□ -1.05
HMGB1P13-201ENST00000406019 POP1Q99575 1024 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms