RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 TNS3Q68CZ2 1445 aa18.57■□□□□ 0.56
TOM1-203ENST00000404284 NUP188Q5SRE5 1749 aa18.56■□□□□ 0.56
TOM1-203ENST00000404284 CABP4P57796 275 aa18.56■□□□□ 0.56
TOM1-203ENST00000404284 FOXO4P98177 505 aa18.56■□□□□ 0.56
TOM1-203ENST00000404284 SASS6Q6UVJ0 657 aa18.56■□□□□ 0.56
TOM1-203ENST00000404284 NUP62CLQ9H1M0 184 aa18.56■□□□□ 0.56
TOM1-203ENST00000404284 SH3TC1Q8TE82 1336 aa18.56■□□□□ 0.56
TOM1-203ENST00000404284 LAMA4Q16363 1823 aa18.56■□□□□ 0.56
TOM1-203ENST00000404284 PALLDQ8WX93 1383 aa18.56■□□□□ 0.56
TOM1-203ENST00000404284 NBPF26B4DH59 902 aa18.55■□□□□ 0.56
TOM1-203ENST00000404284 NBPF14Q5TI25 921 aa18.55■□□□□ 0.56
TOM1-203ENST00000404284 NBPF10Q6P3W6 841 aaKnown RBP18.55■□□□□ 0.56
TOM1-203ENST00000404284 Q6ZUG5 572 aa18.55■□□□□ 0.56
TOM1-203ENST00000404284 NBPF15Q8N660 670 aa18.55■□□□□ 0.56
TOM1-203ENST00000404284 KBTBD3Q8NAB2 608 aa18.55■□□□□ 0.56
TOM1-203ENST00000404284 LEO1Q8WVC0 666 aaPredicted RBP18.55■□□□□ 0.56
TOM1-203ENST00000404284 CHMP3Q9Y3E7 222 aa18.55■□□□□ 0.56
TOM1-203ENST00000404284 DCCP43146 1447 aa18.55■□□□□ 0.56
TOM1-203ENST00000404284 TMEM94Q12767 1356 aa18.55■□□□□ 0.56
TOM1-203ENST00000404284 ATF3P18847 181 aa18.55■□□□□ 0.56
TOM1-203ENST00000404284 MAP3K11Q16584 847 aa18.55■□□□□ 0.56
TOM1-203ENST00000404284 SPATA32Q96LK8 384 aa18.55■□□□□ 0.56
TOM1-203ENST00000404284 TFIP11Q9UBB9 837 aaKnown RBP18.55■□□□□ 0.56
TOM1-203ENST00000404284 H7C1W4 665 aa18.54■□□□□ 0.56
TOM1-203ENST00000404284 STOX1Q6ZVD7 989 aa18.54■□□□□ 0.56
TOM1-203ENST00000404284 ATG9AQ7Z3C6 839 aa18.54■□□□□ 0.56
TOM1-203ENST00000404284 MRVI1Q9Y6F6 885 aa18.54■□□□□ 0.56
TOM1-203ENST00000404284 STRCP1A6NGW2 1772 aa18.54■□□□□ 0.56
TOM1-203ENST00000404284 RESTQ13127 1097 aa18.54■□□□□ 0.56
TOM1-203ENST00000404284 DACT1Q9NYF0 836 aa18.54■□□□□ 0.56
TOM1-203ENST00000404284 UBR2Q8IWV8 1755 aa18.54■□□□□ 0.56
TOM1-203ENST00000404284 CAMK4Q16566 473 aa18.53■□□□□ 0.56
TOM1-203ENST00000404284 FAM200AQ8TCP9 573 aa18.53■□□□□ 0.56
TOM1-203ENST00000404284 BRF1Q92994 677 aa18.53■□□□□ 0.56
TOM1-203ENST00000404284 CBX1P83916 185 aa18.53■□□□□ 0.56
TOM1-203ENST00000404284 PLCB2Q00722 1185 aa18.53■□□□□ 0.56
TOM1-203ENST00000404284 TYRO3Q06418 890 aa18.53■□□□□ 0.56
TOM1-203ENST00000404284 RBM43Q6ZSC3 357 aaKnown RBP18.53■□□□□ 0.56
TOM1-203ENST00000404284 NOLC1Q14978 699 aaKnown RBP eCLIP18.53■□□□□ 0.567e-7■■■■□ 23.8
TOM1-203ENST00000404284 CPDO75976 1380 aa18.52■□□□□ 0.56
TOM1-203ENST00000404284 PGBD1Q96JS3 809 aa18.52■□□□□ 0.56
TOM1-203ENST00000404284 SCRN1Q12765 414 aa18.52■□□□□ 0.55
TOM1-203ENST00000404284 SLFNL1Q499Z3 407 aa18.52■□□□□ 0.55
TOM1-203ENST00000404284 TTLL7Q6ZT98 887 aa18.52■□□□□ 0.55
TOM1-203ENST00000404284 C17orf53Q8N3J3 647 aaPredicted RBP18.52■□□□□ 0.55
TOM1-203ENST00000404284 LRRC2Q9BYS8 371 aa18.52■□□□□ 0.55
TOM1-203ENST00000404284 DDX19AQ9NUU7 478 aaKnown RBP18.52■□□□□ 0.55
TOM1-203ENST00000404284 SPTLC3Q9NUV7 552 aa18.52■□□□□ 0.55
TOM1-203ENST00000404284 HSP90B1P14625 803 aaKnown RBP18.51■□□□□ 0.55
TOM1-203ENST00000404284 SMARCC2Q8TAQ2 1214 aa18.51■□□□□ 0.55
TOM1-203ENST00000404284 TNMDQ9H2S6 317 aa18.51■□□□□ 0.55
TOM1-203ENST00000404284 GPR108Q9NPR9 543 aa18.51■□□□□ 0.55
TOM1-203ENST00000404284 PAG1Q9NWQ8 432 aa18.51■□□□□ 0.55
TOM1-203ENST00000404284 CCDC9Q9Y3X0 531 aaKnown RBP18.51■□□□□ 0.55
TOM1-203ENST00000404284 GOLIM4O00461 696 aa18.51■□□□□ 0.55
TOM1-203ENST00000404284 CKAP2LQ8IYA6 745 aa18.51■□□□□ 0.55
TOM1-203ENST00000404284 KCNF1Q9H3M0 494 aa18.51■□□□□ 0.55
TOM1-203ENST00000404284 CLSTN2Q9H4D0 955 aa18.51■□□□□ 0.55
TOM1-203ENST00000404284 KCPQ6ZWJ8 1503 aa18.5■□□□□ 0.55
TOM1-203ENST00000404284 MYH15Q9Y2K3 1946 aa18.5■□□□□ 0.55
TOM1-203ENST00000404284 GOLGA6L4A6NEF3 574 aa18.5■□□□□ 0.55
TOM1-203ENST00000404284 HELLSQ9NRZ9 838 aa18.5■□□□□ 0.55
TOM1-203ENST00000404284 CWC25Q9NXE8 425 aaPredicted RBP18.5■□□□□ 0.55
TOM1-203ENST00000404284 SPATA31A3Q5VYP0 1347 aa18.5■□□□□ 0.55
TOM1-203ENST00000404284 PFKFB2O60825 505 aa18.5■□□□□ 0.55
TOM1-203ENST00000404284 DDX11Q96FC9 970 aa18.5■□□□□ 0.55
TOM1-203ENST00000404284 DSCC1Q9BVC3 393 aa18.5■□□□□ 0.55
TOM1-203ENST00000404284 PAPPAQ13219 1627 aa18.49■□□□□ 0.55
TOM1-203ENST00000404284 NR1I2O75469 434 aa18.49■□□□□ 0.55
TOM1-203ENST00000404284 ZMYM1Q5SVZ6 1142 aa18.49■□□□□ 0.55
TOM1-203ENST00000404284 LUZP1Q86V48 1076 aa18.49■□□□□ 0.55
TOM1-203ENST00000404284 NEUROD6Q96NK8 337 aa18.49■□□□□ 0.55
TOM1-203ENST00000404284 HMGB1P09429 215 aaKnown RBP18.49■□□□□ 0.55
TOM1-203ENST00000404284 TIMM10P62072 90 aa18.49■□□□□ 0.55
TOM1-203ENST00000404284 DHX32Q7L7V1 743 aaKnown RBP18.49■□□□□ 0.55
TOM1-203ENST00000404284 LLPHQ9BRT6 129 aaKnown RBP18.49■□□□□ 0.55
TOM1-203ENST00000404284 TMEM51Q9NW97 253 aa18.49■□□□□ 0.55
TOM1-203ENST00000404284 IL15P40933 162 aaPredicted RBP18.48■□□□□ 0.55
TOM1-203ENST00000404284 NSUN7Q8NE18 718 aaKnown RBP18.48■□□□□ 0.55
TOM1-203ENST00000404284 AGXT2Q9BYV1 514 aa18.48■□□□□ 0.55
TOM1-203ENST00000404284 ZSCAN16Q9H4T2 348 aaPredicted RBP18.48■□□□□ 0.55
TOM1-203ENST00000404284 SPEF2Q9C093 1822 aa18.48■□□□□ 0.55
TOM1-203ENST00000404284 KIF20AO95235 890 aa18.48■□□□□ 0.55
TOM1-203ENST00000404284 ANO6Q4KMQ2 910 aa18.48■□□□□ 0.55
TOM1-203ENST00000404284 LRRC24Q50LG9 513 aa18.48■□□□□ 0.55
TOM1-203ENST00000404284 GTPBP4Q9BZE4 634 aaKnown RBP18.48■□□□□ 0.55
TOM1-203ENST00000404284 CBX8Q9HC52 389 aa18.48■□□□□ 0.55
TOM1-203ENST00000404284 A0A0G2JLW4 131 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 H3BQV1 296 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 CTDNEP1O95476 244 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 EXOSC10Q01780 885 aaKnown RBP18.47■□□□□ 0.55
TOM1-203ENST00000404284 DNTTIP2Q5QJE6 756 aaKnown RBP18.47■□□□□ 0.55
TOM1-203ENST00000404284 IFFO2Q5TF58 517 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 TICAM2Q86XR7 235 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 BICD2Q8TD16 824 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 VGLL3A8MV65 326 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 EYA2O00167 538 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 A1BGP04217 495 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 SPC24Q8NBT2 197 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 MYRIPQ8NFW9 859 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms