RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 RRAGCQ9HB90 399 aa7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 ZNF277Q9NRM2 450 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 IL16Q14005 1332 aa7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 FANCIQ9NVI1 1328 aa7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 CEP350Q5VT06 3117 aa7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 RIC1Q4ADV7 1423 aa7.44□□□□□ -1.22
HMGB1P20-201ENST00000402555 TAF1P21675 1872 aa7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 DICER1Q9UPY3 1922 aaKnown RBP7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 HOXA10P31260 410 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 EXOSC9Q06265 439 aaKnown RBP7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 DSG2Q14126 1118 aa7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 SLC10A5Q5PT55 438 aa7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 SOGA3Q5TF21 947 aa7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 CCDC30Q5VVM6 783 aa7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 G2E3Q7L622 706 aa7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 JARID2Q92833 1246 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 FAM89AQ96GI7 184 aa7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 RBM17Q96I25 401 aaKnown RBP7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 NLRP3Q96P20 1036 aa7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 MYD88Q99836 296 aa7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 KDM2BQ8NHM5 1336 aa7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 SH3TC1Q8TE82 1336 aa7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 LTBP3Q9NS15 1303 aa7.43□□□□□ -1.22
HMGB1P20-201ENST00000402555 DDX60Q8IY21 1712 aaKnown RBP7.42□□□□□ -1.22
HMGB1P20-201ENST00000402555 GLTPD2A6NH11 291 aa7.42□□□□□ -1.22
HMGB1P20-201ENST00000402555 PPEF1O14829 653 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P20-201ENST00000402555 PBX2P40425 430 aa7.42□□□□□ -1.22
HMGB1P20-201ENST00000402555 FKBP4Q02790 459 aaKnown RBP eCLIP7.42□□□□□ -1.22
HMGB1P20-201ENST00000402555 WDR63Q8IWG1 891 aa7.42□□□□□ -1.22
HMGB1P20-201ENST00000402555 CRAMP1Q96RY5 1269 aa7.42□□□□□ -1.22
HMGB1P20-201ENST00000402555 MAP3K2Q9Y2U5 619 aa7.42□□□□□ -1.22
HMGB1P20-201ENST00000402555 ABCC4O15439 1325 aa7.42□□□□□ -1.22
HMGB1P20-201ENST00000402555 RNF123Q5XPI4 1314 aa7.42□□□□□ -1.22
HMGB1P20-201ENST00000402555 SNED1Q8TER0 1413 aa7.42□□□□□ -1.22
HMGB1P20-201ENST00000402555 COL4A1P02462 1669 aa7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 PI4KAP2A4QPH2 592 aa7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 IRS4O14654 1257 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 DDNO94850 711 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 LSM11P83369 360 aaKnown RBP eCLIP7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 POTEEQ6S8J3 1075 aa7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 RTKN2Q8IZC4 609 aa7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 PI4KAP1Q8N8J0 262 aa7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 STK31Q9BXU1 1019 aa7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 CRISPLD2Q9H0B8 497 aa7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 ZNF541Q9H0D2 1346 aa7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 ZC3H4Q9UPT8 1303 aaKnown RBP7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 COL4A5P29400 1685 aa7.41□□□□□ -1.22
HMGB1P20-201ENST00000402555 POTECB2RU33 542 aa7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 GTPBP6O43824 516 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 VAMP4O75379 141 aa7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 TOMM70O94826 608 aa7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 DDX58O95786 925 aaKnown RBP7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 IGKV5-2P06315 115 aa7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 IARSP41252 1262 aaKnown RBP7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 TRIM28Q13263 835 aaKnown RBP7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 KSR2Q6VAB6 950 aa7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 DDX46Q7L014 1031 aaKnown RBP7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 C16orf71Q8IYS4 520 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 CELF1Q92879 486 aaKnown RBP7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 RNF166Q96A37 237 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 CCDC85AQ96PX6 553 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 METTL22Q9BUU2 404 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P20-201ENST00000402555 ZNF521Q96K83 1311 aa7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 VEGFAP15692 232 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 HSPA6P17066 643 aa7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 FLIIQ13045 1269 aa7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 GRAPQ13588 217 aa7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 CWF19L2Q2TBE0 894 aaKnown RBP7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 CC2D2BQ6DHV5 1058 aa7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 ZBTB38Q8NAP3 1195 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 CCDC191Q8NCU4 936 aa7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 GRAPLQ8TC17 118 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 PSMD1Q99460 953 aa7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 CHMP4AQ9BY43 222 aa7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 MYH16Q9H6N6 1097 aa7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 SEC31BQ9NQW1 1179 aa7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 CWC25Q9NXE8 425 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 ATP6V0A2Q9Y487 856 aa7.39□□□□□ -1.23
HMGB1P20-201ENST00000402555 WDR90Q96KV7 1748 aa7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 NEURL1BA8MQ27 555 aa7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 F6X3S4 739 aa7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 BBOX1O75936 387 aa7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 PCCAP05165 728 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 FKBP5Q13451 457 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 SF3B3Q15393 1217 aaKnown RBP7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 AOC3Q16853 763 aa7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 DPP8Q6V1X1 898 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 SP8Q8IXZ3 490 aa7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 LARGE2Q8N3Y3 721 aa7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 MPNDQ8N594 471 aa7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 RBM46Q8TBY0 533 aaKnown RBP7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 JDP2Q8WYK2 163 aa7.38□□□□□ -1.23
HMGB1P20-201ENST00000402555 DUOX1Q9NRD9 1551 aa7.37□□□□□ -1.23
HMGB1P20-201ENST00000402555 CACNA1FO60840 1977 aa7.37□□□□□ -1.23
HMGB1P20-201ENST00000402555 FZD9O00144 591 aa7.37□□□□□ -1.23
HMGB1P20-201ENST00000402555 PPIP5K2O43314 1243 aa7.37□□□□□ -1.23
HMGB1P20-201ENST00000402555 HTRA3P83110 453 aa7.37□□□□□ -1.23
HMGB1P20-201ENST00000402555 NEXNQ0ZGT2 675 aa7.37□□□□□ -1.23
HMGB1P20-201ENST00000402555 UBE3BQ7Z3V4 1068 aa7.37□□□□□ -1.23
HMGB1P20-201ENST00000402555 DNAAF4Q8WXU2 420 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms