RNA–Protein interactions for RNA: ENST00000402412.5

R3HDM2-204, Transcript of R3H domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,372 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-204ENST00000402412 MACROD2A1Z1Q3 448 aa15.9■□□□□ 0.14
R3HDM2-204ENST00000402412 PTPRUQ92729 1446 aa15.9■□□□□ 0.14
R3HDM2-204ENST00000402412 IARSP41252 1262 aaKnown RBP15.89■□□□□ 0.14
R3HDM2-204ENST00000402412 PTCH1Q13635 1447 aa15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 FAM170AA1A519 330 aa15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 NLRP5P59047 1200 aa15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 CCDC24Q8N4L8 307 aa15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 CTCFLQ8NI51 663 aaPredicted RBP15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 NGLY1Q96IV0 654 aa15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 CPS1P31327 1500 aa15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 DIP2AQ14689 1571 aa15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 LEKR1Q6ZMV7 388 aa15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 EYA1Q99502 592 aa15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 SH2B1Q9NRF2 756 aaPredicted RBP15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 ZBTB40Q9NUA8 1239 aa15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 HYPKQ9NX55 129 aa15.89■□□□□ 0.13
R3HDM2-204ENST00000402412 HDAC1Q13547 482 aaPredicted RBP15.88■□□□□ 0.13
R3HDM2-204ENST00000402412 CCDC129Q6ZRS4 1044 aa15.88■□□□□ 0.13
R3HDM2-204ENST00000402412 ERCC4Q92889 916 aaPredicted RBP15.88■□□□□ 0.13
R3HDM2-204ENST00000402412 TTC21AQ8NDW8 1320 aa15.88■□□□□ 0.13
R3HDM2-204ENST00000402412 CCDC96Q2M329 555 aa15.88■□□□□ 0.13
R3HDM2-204ENST00000402412 ANO6Q4KMQ2 910 aa15.88■□□□□ 0.13
R3HDM2-204ENST00000402412 CAVIN4Q5BKX8 364 aa15.88■□□□□ 0.13
R3HDM2-204ENST00000402412 PLEKHM2Q8IWE5 1019 aa15.88■□□□□ 0.13
R3HDM2-204ENST00000402412 HSPA2P54652 639 aa15.88■□□□□ 0.13
R3HDM2-204ENST00000402412 MIGA1Q8NAN2 632 aa15.88■□□□□ 0.13
R3HDM2-204ENST00000402412 KIF18AQ8NI77 898 aa15.88■□□□□ 0.13
R3HDM2-204ENST00000402412 NRXN3Q9Y4C0 1643 aa15.88■□□□□ 0.13
R3HDM2-204ENST00000402412 PTGS1P23219 599 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 WDR78Q5VTH9 848 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 OTUD7BQ6GQQ9 843 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 MTERF4Q7Z6M4 381 aaKnown RBP15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 CRACR2BQ8N4Y2 399 aaPredicted RBP15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 AKAP2Q9Y2D5 859 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 ANKRD18BA2A2Z9 1011 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 AK2P54819 239 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 CEP85Q6P2H3 762 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 DRC1Q96MC2 740 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 ZKSCAN3Q9BRR0 538 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 CCDC113Q9H0I3 377 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 BMP2KQ9NSY1 1161 aaPredicted RBP15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 ZPR1O75312 459 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 TDRD12Q587J7 1177 aaKnown RBP15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 Q6ZUG5 572 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 IQCA1Q86XH1 822 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 STX17P56962 302 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 NMIQ13287 307 aaPredicted RBP15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 AMOTQ4VCS5 1084 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 PPP4R3BQ5MIZ7 849 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 EDC3Q96F86 508 aaKnown RBP15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 UIMC1Q96RL1 719 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 PLIN2Q99541 437 aa15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 NUP88Q99567 741 aaPredicted RBP15.87■□□□□ 0.13
R3HDM2-204ENST00000402412 ZSCAN22P10073 491 aaPredicted RBP15.86■□□□□ 0.13
R3HDM2-204ENST00000402412 TCERG1LQ5VWI1 586 aa15.86■□□□□ 0.13
R3HDM2-204ENST00000402412 TSPY2A6NKD2 308 aa15.86■□□□□ 0.13
R3HDM2-204ENST00000402412 ZNF444Q8N0Y2 327 aaPredicted RBP15.86■□□□□ 0.13
R3HDM2-204ENST00000402412 MYO1BO43795 1136 aa15.86■□□□□ 0.13
R3HDM2-204ENST00000402412 APOBRQ0VD83 1088 aa15.86■□□□□ 0.13
R3HDM2-204ENST00000402412 SLC9C2Q5TAH2 1124 aa15.86■□□□□ 0.13
R3HDM2-204ENST00000402412 IFNL2Q8IZJ0 200 aa15.86■□□□□ 0.13
R3HDM2-204ENST00000402412 MMRN2Q9H8L6 949 aa15.86■□□□□ 0.13
R3HDM2-204ENST00000402412 CWC25Q9NXE8 425 aaPredicted RBP15.86■□□□□ 0.13
R3HDM2-204ENST00000402412 CGNQ9P2M7 1197 aaKnown RBP15.86■□□□□ 0.13
R3HDM2-204ENST00000402412 PTPRCP08575 1304 aa15.86■□□□□ 0.13
R3HDM2-204ENST00000402412 SMTNL1A8MU46 457 aa15.85■□□□□ 0.13
R3HDM2-204ENST00000402412 GRM8O00222 908 aa15.85■□□□□ 0.13
R3HDM2-204ENST00000402412 EXOC5O00471 708 aa15.85■□□□□ 0.13
R3HDM2-204ENST00000402412 TMCO3Q6UWJ1 677 aa15.85■□□□□ 0.13
R3HDM2-204ENST00000402412 SRRTQ9BXP5 876 aaKnown RBP15.85■□□□□ 0.13
R3HDM2-204ENST00000402412 MED14O60244 1454 aa15.85■□□□□ 0.13
R3HDM2-204ENST00000402412 DDX17Q92841 729 aaKnown RBP15.85■□□□□ 0.13
R3HDM2-204ENST00000402412 RRP9O43818 475 aaKnown RBP15.85■□□□□ 0.13
R3HDM2-204ENST00000402412 GTF2F1P35269 517 aaKnown RBP eCLIP15.85■□□□□ 0.137e-13■■■□□ 15.9
R3HDM2-204ENST00000402412 METAP2P50579 478 aaKnown RBP eCLIP15.85■□□□□ 0.13
R3HDM2-204ENST00000402412 ZNF622Q969S3 477 aaKnown RBP eCLIP15.85■□□□□ 0.133e-7■■■□□ 18.4
R3HDM2-204ENST00000402412 CCDC194A0A1B0GVG4 234 aa15.85■□□□□ 0.13
R3HDM2-204ENST00000402412 DACH1Q9UI36 760 aa15.85■□□□□ 0.13
R3HDM2-204ENST00000402412 CBFA2T2O43439 604 aa15.84■□□□□ 0.13
R3HDM2-204ENST00000402412 ERCC3P19447 782 aa15.84■□□□□ 0.13
R3HDM2-204ENST00000402412 USP8P40818 1118 aa15.84■□□□□ 0.13
R3HDM2-204ENST00000402412 GNG11P61952 73 aa15.84■□□□□ 0.13
R3HDM2-204ENST00000402412 UBE2HP62256 183 aa15.84■□□□□ 0.13
R3HDM2-204ENST00000402412 CACNA2D4Q7Z3S7 1137 aa15.84■□□□□ 0.13
R3HDM2-204ENST00000402412 LUZP1Q86V48 1076 aa15.84■□□□□ 0.13
R3HDM2-204ENST00000402412 TSC1Q92574 1164 aa15.84■□□□□ 0.13
R3HDM2-204ENST00000402412 FAM107BQ9H098 131 aa15.84■□□□□ 0.13
R3HDM2-204ENST00000402412 ADAMTSL3P82987 1691 aa15.84■□□□□ 0.13
R3HDM2-204ENST00000402412 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
R3HDM2-204ENST00000402412 LGR6Q9HBX8 967 aa15.83■□□□□ 0.13
R3HDM2-204ENST00000402412 NCOA5Q9HCD5 579 aaKnown RBP15.83■□□□□ 0.13
R3HDM2-204ENST00000402412 CDR1P51861 262 aa15.83■□□□□ 0.12
R3HDM2-204ENST00000402412 ATP8B2P98198 1209 aa15.83■□□□□ 0.12
R3HDM2-204ENST00000402412 CPSF1Q10570 1443 aaKnown RBP15.83■□□□□ 0.12
R3HDM2-204ENST00000402412 SSRP1Q08945 709 aaKnown RBP15.83■□□□□ 0.12
R3HDM2-204ENST00000402412 FAM89AQ96GI7 184 aa15.83■□□□□ 0.12
R3HDM2-204ENST00000402412 DCTPP1Q9H773 170 aa15.83■□□□□ 0.12
R3HDM2-204ENST00000402412 SNRPA1P09661 255 aaKnown RBP15.82■□□□□ 0.12
R3HDM2-204ENST00000402412 AOPEPQ8N6M6 819 aa15.82■□□□□ 0.12
R3HDM2-204ENST00000402412 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms