RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 KDM5CP41229 1560 aa16.73■□□□□ 0.27
GABPA-202ENST00000400075 PER1O15534 1290 aaPredicted RBP16.73■□□□□ 0.27
GABPA-202ENST00000400075 KCNQ4P56696 695 aa16.73■□□□□ 0.27
GABPA-202ENST00000400075 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
GABPA-202ENST00000400075 SULF1Q8IWU6 871 aa16.72■□□□□ 0.27
GABPA-202ENST00000400075 SPATA32Q96LK8 384 aa16.72■□□□□ 0.27
GABPA-202ENST00000400075 NEK1Q96PY6 1258 aa16.72■□□□□ 0.27
GABPA-202ENST00000400075 HMG20BQ9P0W2 317 aa16.72■□□□□ 0.27
GABPA-202ENST00000400075 CCDC39Q9UFE4 941 aa16.72■□□□□ 0.27
GABPA-202ENST00000400075 TIMM10P62072 90 aa16.72■□□□□ 0.27
GABPA-202ENST00000400075 RAB3GAP1Q15042 981 aa16.72■□□□□ 0.27
GABPA-202ENST00000400075 MCMDC2Q4G0Z9 681 aa16.72■□□□□ 0.27
GABPA-202ENST00000400075 TAF5LO75529 589 aa16.72■□□□□ 0.27
GABPA-202ENST00000400075 METAP2P50579 478 aaKnown RBP eCLIP16.72■□□□□ 0.27
GABPA-202ENST00000400075 G2E3Q7L622 706 aa16.72■□□□□ 0.27
GABPA-202ENST00000400075 ADGRL3Q9HAR2 1447 aa16.72■□□□□ 0.27
GABPA-202ENST00000400075 SERPINB2P05120 415 aa16.71■□□□□ 0.27
GABPA-202ENST00000400075 FERMT3Q86UX7 667 aa16.71■□□□□ 0.27
GABPA-202ENST00000400075 LIG1P18858 919 aa16.71■□□□□ 0.27
GABPA-202ENST00000400075 UBA5Q9GZZ9 404 aa16.71■□□□□ 0.27
GABPA-202ENST00000400075 A0A1B0GUL7 405 aa16.71■□□□□ 0.26
GABPA-202ENST00000400075 CSADQ9Y600 493 aa16.71■□□□□ 0.26
GABPA-202ENST00000400075 GTF2IP78347 998 aa16.7■□□□□ 0.26
GABPA-202ENST00000400075 SMARCC2Q8TAQ2 1214 aa16.7■□□□□ 0.26
GABPA-202ENST00000400075 ERBB4Q15303 1308 aa16.7■□□□□ 0.26
GABPA-202ENST00000400075 PRPF40AO75400 957 aaKnown RBP16.7■□□□□ 0.26
GABPA-202ENST00000400075 GIGYF1O75420 1035 aaPredicted RBP16.7■□□□□ 0.26
GABPA-202ENST00000400075 IL6STP40189 918 aaPredicted RBP16.7■□□□□ 0.26
GABPA-202ENST00000400075 IL17REQ8NFR9 667 aa16.7■□□□□ 0.26
GABPA-202ENST00000400075 NBPF7P0C2Y1 421 aaPredicted RBP16.7■□□□□ 0.26
GABPA-202ENST00000400075 RDXP35241 583 aaKnown RBP16.7■□□□□ 0.26
GABPA-202ENST00000400075 USP48Q86UV5 1035 aa16.7■□□□□ 0.26
GABPA-202ENST00000400075 NPC1L1Q9UHC9 1359 aa16.7■□□□□ 0.26
GABPA-202ENST00000400075 GUCY1B3Q02153 619 aa16.7■□□□□ 0.26
GABPA-202ENST00000400075 GCKRQ14397 625 aa16.7■□□□□ 0.26
GABPA-202ENST00000400075 DCPSQ96C86 337 aaKnown RBP16.7■□□□□ 0.26
GABPA-202ENST00000400075 LPIN2Q92539 896 aa16.69■□□□□ 0.26
GABPA-202ENST00000400075 ZNF594Q96JF6 807 aaPredicted RBP16.69■□□□□ 0.26
GABPA-202ENST00000400075 DESP17661 470 aa16.69■□□□□ 0.26
GABPA-202ENST00000400075 CERS3Q8IU89 383 aa16.69■□□□□ 0.26
GABPA-202ENST00000400075 TCP11L1Q9NUJ3 509 aa16.69■□□□□ 0.26
GABPA-202ENST00000400075 ZBTB1Q9Y2K1 713 aa16.69■□□□□ 0.26
GABPA-202ENST00000400075 FAM135BQ49AJ0 1406 aa16.69■□□□□ 0.26
GABPA-202ENST00000400075 PRR36Q9H6K5 1346 aa16.69■□□□□ 0.26
GABPA-202ENST00000400075 ZNHIT6Q9NWK9 470 aaKnown RBP16.69■□□□□ 0.26
GABPA-202ENST00000400075 ANKARQ7Z5J8 1434 aa16.69■□□□□ 0.26
GABPA-202ENST00000400075 RNF113AO15541 343 aaKnown RBP16.68■□□□□ 0.26
GABPA-202ENST00000400075 ORC3Q9UBD5 711 aaPredicted RBP16.68■□□□□ 0.26
GABPA-202ENST00000400075 SPATA31A6Q5VVP1 1343 aa16.68■□□□□ 0.26
GABPA-202ENST00000400075 ZBTB43O43298 467 aa16.68■□□□□ 0.26
GABPA-202ENST00000400075 SLC26A6Q9BXS9 759 aa16.68■□□□□ 0.26
GABPA-202ENST00000400075 ATP2B4P23634 1241 aa16.68■□□□□ 0.26
GABPA-202ENST00000400075 CCDC173Q0VFZ6 552 aa16.68■□□□□ 0.26
GABPA-202ENST00000400075 RAB11FIP4Q86YS3 637 aa16.68■□□□□ 0.26
GABPA-202ENST00000400075 ARHGEF10LQ9HCE6 1279 aa16.68■□□□□ 0.26
GABPA-202ENST00000400075 SMCR8Q8TEV9 937 aaPredicted RBP16.68■□□□□ 0.26
GABPA-202ENST00000400075 LETM1O95202 739 aaPredicted RBP16.67■□□□□ 0.26
GABPA-202ENST00000400075 PDE1AP54750 535 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 RIMBP3CA6NJZ7 1639 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 RIMBP3BA6NNM3 1639 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 RIMBP3Q9UFD9 1639 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 ARHGAP31Q2M1Z3 1444 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 SBNO2Q9Y2G9 1366 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 SMC2O95347 1197 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 BRDTQ58F21 947 aaPredicted RBP16.67■□□□□ 0.26
GABPA-202ENST00000400075 TTLL7Q6ZT98 887 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 GOLGA6L1Q8N7Z2 621 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 CCDC148Q8NFR7 591 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 SMARCE1Q969G3 411 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 LIMCH1Q9UPQ0 1083 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 MMP10P09238 476 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 USP6P35125 1406 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 MFSD14BQ5SR56 506 aa16.67■□□□□ 0.26
GABPA-202ENST00000400075 SAP30BPQ9UHR5 308 aaKnown RBP16.67■□□□□ 0.26
GABPA-202ENST00000400075 TTF2Q9UNY4 1162 aaKnown RBP16.67■□□□□ 0.26
GABPA-202ENST00000400075 KLF18A0A0U1RQI7 1052 aa16.66■□□□□ 0.26
GABPA-202ENST00000400075 KCNQ3O43525 872 aa16.66■□□□□ 0.26
GABPA-202ENST00000400075 ZBTB7AO95365 584 aa16.66■□□□□ 0.26
GABPA-202ENST00000400075 DALRD3Q5D0E6 543 aaKnown RBP16.66■□□□□ 0.26
GABPA-202ENST00000400075 RTN4Q9NQC3 1192 aaKnown RBP16.66■□□□□ 0.26
GABPA-202ENST00000400075 ABCC3O15438 1527 aa16.66■□□□□ 0.26
GABPA-202ENST00000400075 TCP10Q12799 353 aa16.66■□□□□ 0.26
GABPA-202ENST00000400075 MROH5Q6ZUA9 1318 aa16.66■□□□□ 0.26
GABPA-202ENST00000400075 SPDYE3A6NKU9 549 aa16.66■□□□□ 0.26
GABPA-202ENST00000400075 TEKT1Q969V4 418 aa16.66■□□□□ 0.26
GABPA-202ENST00000400075 MAP3K4Q9Y6R4 1608 aa16.66■□□□□ 0.26
GABPA-202ENST00000400075 KIF20AO95235 890 aa16.66■□□□□ 0.26
GABPA-202ENST00000400075 MBD4O95243 580 aa16.66■□□□□ 0.26
GABPA-202ENST00000400075 UBA7P41226 1012 aa16.65■□□□□ 0.26
GABPA-202ENST00000400075 TNMDQ9H2S6 317 aa16.65■□□□□ 0.26
GABPA-202ENST00000400075 TTC41PQ6P2S7 1318 aa16.65■□□□□ 0.26
GABPA-202ENST00000400075 CA8P35219 290 aa16.65■□□□□ 0.26
GABPA-202ENST00000400075 IRX3P78415 501 aaPredicted RBP16.65■□□□□ 0.26
GABPA-202ENST00000400075 RTN1Q16799 776 aa16.65■□□□□ 0.26
GABPA-202ENST00000400075 CALML4Q96GE6 196 aa16.65■□□□□ 0.26
GABPA-202ENST00000400075 TRIM5Q9C035 493 aa16.65■□□□□ 0.26
GABPA-202ENST00000400075 LUC7LQ9NQ29 371 aaKnown RBP16.65■□□□□ 0.26
GABPA-202ENST00000400075 HEATR3Q7Z4Q2 680 aa16.65■□□□□ 0.26
GABPA-202ENST00000400075 NOD1Q9Y239 953 aa16.65■□□□□ 0.26
GABPA-202ENST00000400075 MAP3K15Q6ZN16 1313 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms