RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 CLGNO14967 610 aa18.33■□□□□ 0.52
ITSN1-209ENST00000399352 TTC16Q8NEE8 873 aa18.33■□□□□ 0.52
ITSN1-209ENST00000399352 STMN4Q9H169 189 aaPredicted RBP18.33■□□□□ 0.52
ITSN1-209ENST00000399352 TRMT112Q9UI30 125 aaKnown RBP18.33■□□□□ 0.52
ITSN1-209ENST00000399352 ARFGAP2Q8N6H7 521 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 JARID2Q92833 1246 aaPredicted RBP18.32■□□□□ 0.52
ITSN1-209ENST00000399352 PPP1R9BQ96SB3 815 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 RBSNQ9H1K0 784 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 VAV2P52735 878 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 KAT14Q9H8E8 782 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 PSMA7O14818 248 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 TBC1D5Q92609 795 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 VGLL3A8MV65 326 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 SPTLC2O15270 562 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 PI4KAP2A4QPH2 592 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 RIOK3O14730 519 aaKnown RBP18.32■□□□□ 0.52
ITSN1-209ENST00000399352 ZBTB43O43298 467 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 C17orf53Q8N3J3 647 aaPredicted RBP18.32■□□□□ 0.52
ITSN1-209ENST00000399352 PI4KAP1Q8N8J0 262 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 DDX12PQ92771 950 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 DNAI2Q9GZS0 605 aa18.32■□□□□ 0.52
ITSN1-209ENST00000399352 STXBP4Q6ZWJ1 553 aa18.31■□□□□ 0.52
ITSN1-209ENST00000399352 ERO1AQ96HE7 468 aa18.31■□□□□ 0.52
ITSN1-209ENST00000399352 SAMD15Q9P1V8 674 aa18.31■□□□□ 0.52
ITSN1-209ENST00000399352 ANKIB1Q9P2G1 1089 aa18.31■□□□□ 0.52
ITSN1-209ENST00000399352 CCDC172P0C7W6 258 aa18.31■□□□□ 0.52
ITSN1-209ENST00000399352 CFAP58Q5T655 872 aa18.31■□□□□ 0.52
ITSN1-209ENST00000399352 WAPLQ7Z5K2 1190 aa18.31■□□□□ 0.52
ITSN1-209ENST00000399352 NAP1L3Q99457 506 aaPredicted RBP18.31■□□□□ 0.52
ITSN1-209ENST00000399352 ZBTB3Q9H5J0 574 aa18.31■□□□□ 0.52
ITSN1-209ENST00000399352 ATP5J2-PTCD1G3V325 749 aa18.31■□□□□ 0.52
ITSN1-209ENST00000399352 TBCAO75347 108 aaKnown RBP18.31■□□□□ 0.52
ITSN1-209ENST00000399352 GJC1P36383 396 aa18.31■□□□□ 0.52
ITSN1-209ENST00000399352 SLC52A1Q9NWF4 448 aa18.31■□□□□ 0.52
ITSN1-209ENST00000399352 NBPF7P0C2Y1 421 aaPredicted RBP18.31■□□□□ 0.52
ITSN1-209ENST00000399352 TTF1Q15361 905 aaPredicted RBP18.31■□□□□ 0.52
ITSN1-209ENST00000399352 DDX23Q9BUQ8 820 aaKnown RBP18.31■□□□□ 0.52
ITSN1-209ENST00000399352 KCNK9Q9NPC2 374 aa18.31■□□□□ 0.52
ITSN1-209ENST00000399352 TMEM110-MUSTN1A8MSY1 372 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 SEC24BO95487 1268 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 UBE3BQ7Z3V4 1068 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 RABEP2Q9H5N1 569 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 DAPK1P53355 1430 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 SMARCA4P51532 1647 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 ASIC1P78348 528 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 WTAPQ15007 396 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 CCDC63Q8NA47 563 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 GPTP24298 496 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 UBXN1Q04323 297 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 CCDC25Q86WR0 208 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 LRRC27Q9C0I9 530 aa18.3■□□□□ 0.52
ITSN1-209ENST00000399352 CCDC174Q6PII3 467 aa18.29■□□□□ 0.52
ITSN1-209ENST00000399352 CFAP57Q96MR6 1250 aa18.29■□□□□ 0.52
ITSN1-209ENST00000399352 ANXA1P04083 346 aa18.29■□□□□ 0.52
ITSN1-209ENST00000399352 STIM2Q9P246 746 aa18.29■□□□□ 0.52
ITSN1-209ENST00000399352 AK2P54819 239 aa18.29■□□□□ 0.52
ITSN1-209ENST00000399352 LDHAL6AQ6ZMR3 332 aa18.29■□□□□ 0.52
ITSN1-209ENST00000399352 GSTA5Q7RTV2 222 aa18.29■□□□□ 0.52
ITSN1-209ENST00000399352 SAMM50Q9Y512 469 aa18.29■□□□□ 0.52
ITSN1-209ENST00000399352 NPHP3Q7Z494 1330 aa18.28■□□□□ 0.52
ITSN1-209ENST00000399352 A0A1B0GUA9 196 aa18.28■□□□□ 0.52
ITSN1-209ENST00000399352 HPDP32754 393 aaPredicted RBP18.28■□□□□ 0.52
ITSN1-209ENST00000399352 TUBB4BP68371 445 aa18.28■□□□□ 0.52
ITSN1-209ENST00000399352 AFAP1L1Q8TED9 768 aa18.28■□□□□ 0.52
ITSN1-209ENST00000399352 TTC21AQ8NDW8 1320 aa18.28■□□□□ 0.52
ITSN1-209ENST00000399352 NAIPQ13075 1403 aa18.28■□□□□ 0.52
ITSN1-209ENST00000399352 RPGRIP1LQ68CZ1 1315 aa18.28■□□□□ 0.52
ITSN1-209ENST00000399352 PRG4Q92954 1404 aaPredicted RBP18.28■□□□□ 0.52
ITSN1-209ENST00000399352 LACTBP83111 547 aaPredicted RBP18.28■□□□□ 0.52
ITSN1-209ENST00000399352 EHBP1L1Q8N3D4 1523 aa18.27■□□□□ 0.52
ITSN1-209ENST00000399352 NCOA1Q15788 1441 aa18.27■□□□□ 0.52
ITSN1-209ENST00000399352 NUTM2BA6NNL0 878 aaPredicted RBP18.27■□□□□ 0.52
ITSN1-209ENST00000399352 NUTM2EB1AL46 878 aaPredicted RBP18.27■□□□□ 0.52
ITSN1-209ENST00000399352 NUTM2AQ8IVF1 878 aaPredicted RBP18.27■□□□□ 0.52
ITSN1-209ENST00000399352 SREK1Q8WXA9 508 aaKnown RBP18.27■□□□□ 0.52
ITSN1-209ENST00000399352 SEPT6Q14141 434 aa18.27■□□□□ 0.52
ITSN1-209ENST00000399352 ELF2Q15723 593 aa18.27■□□□□ 0.52
ITSN1-209ENST00000399352 UBLCP1Q8WVY7 318 aaPredicted RBP18.27■□□□□ 0.52
ITSN1-209ENST00000399352 NDUFAB1O14561 156 aa18.27■□□□□ 0.52
ITSN1-209ENST00000399352 BMP15O95972 392 aa18.27■□□□□ 0.52
ITSN1-209ENST00000399352 PDE4BQ07343 736 aa18.27■□□□□ 0.52
ITSN1-209ENST00000399352 SETDB1Q15047 1291 aa18.27■□□□□ 0.52
ITSN1-209ENST00000399352 BAG1Q99933 345 aaPredicted RBP18.27■□□□□ 0.51
ITSN1-209ENST00000399352 CPSF2Q9P2I0 782 aaKnown RBP18.27■□□□□ 0.51
ITSN1-209ENST00000399352 MRVI1Q9Y6F6 885 aa18.27■□□□□ 0.51
ITSN1-209ENST00000399352 RTN1Q16799 776 aa18.26■□□□□ 0.51
ITSN1-209ENST00000399352 TNNQ9UQP3 1299 aa18.26■□□□□ 0.51
ITSN1-209ENST00000399352 PSMC4P43686 418 aa18.26■□□□□ 0.51
ITSN1-209ENST00000399352 TMOD3Q9NYL9 352 aa18.26■□□□□ 0.51
ITSN1-209ENST00000399352 STX8Q9UNK0 236 aa18.26■□□□□ 0.51
ITSN1-209ENST00000399352 PRPHP41219 470 aa18.26■□□□□ 0.51
ITSN1-209ENST00000399352 PLCB3Q01970 1234 aa18.26■□□□□ 0.51
ITSN1-209ENST00000399352 CCDC122Q5T0U0 273 aa18.26■□□□□ 0.51
ITSN1-209ENST00000399352 PPFIBP2Q8ND30 876 aa18.26■□□□□ 0.51
ITSN1-209ENST00000399352 LMBR1Q8WVP7 490 aa18.26■□□□□ 0.51
ITSN1-209ENST00000399352 SEC62Q99442 399 aaKnown RBP18.26■□□□□ 0.51
ITSN1-209ENST00000399352 FERMT1Q9BQL6 677 aa18.26■□□□□ 0.51
ITSN1-209ENST00000399352 ARL1P40616 181 aaPredicted RBP18.25■□□□□ 0.51
ITSN1-209ENST00000399352 AQRO60306 1485 aaKnown RBP eCLIP18.25■□□□□ 0.51
ITSN1-209ENST00000399352 ATP2A1O14983 1001 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms