RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 DBNDD2Q9BQY9 259 aa8.28□□□□□ -1.08
CX3CR1-202ENST00000399220 CEP126Q9P2H0 1117 aa8.28□□□□□ -1.08
CX3CR1-202ENST00000399220 MYO5AQ9Y4I1 1855 aaKnown RBP8.28□□□□□ -1.08
CX3CR1-202ENST00000399220 A0A1B0GUL7 405 aa8.28□□□□□ -1.08
CX3CR1-202ENST00000399220 TRIM6-TRIM34B2RNG4 842 aa8.28□□□□□ -1.08
CX3CR1-202ENST00000399220 NECTIN1Q15223 517 aa8.28□□□□□ -1.08
CX3CR1-202ENST00000399220 CCDC8Q9H0W5 538 aaPredicted RBP8.28□□□□□ -1.08
CX3CR1-202ENST00000399220 IL25Q9H293 177 aa8.28□□□□□ -1.08
CX3CR1-202ENST00000399220 RTCBQ9Y3I0 505 aaKnown RBP8.28□□□□□ -1.08
CX3CR1-202ENST00000399220 KLRG2A4D1S0 409 aaPredicted RBP8.27□□□□□ -1.08
CX3CR1-202ENST00000399220 CLEC17AQ6ZS10 378 aa8.27□□□□□ -1.08
CX3CR1-202ENST00000399220 JARID2Q92833 1246 aaPredicted RBP8.27□□□□□ -1.08
CX3CR1-202ENST00000399220 CDC5LQ99459 802 aaKnown RBP8.27□□□□□ -1.08
CX3CR1-202ENST00000399220 PUS3Q9BZE2 481 aaKnown RBP8.27□□□□□ -1.08
CX3CR1-202ENST00000399220 SIL1Q9H173 461 aa8.27□□□□□ -1.08
CX3CR1-202ENST00000399220 NIP7Q9Y221 180 aaKnown RBP eCLIP8.27□□□□□ -1.08
CX3CR1-202ENST00000399220 ZNF804BA4D1E1 1349 aa8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 KIF13BQ9NQT8 1826 aa8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 K7ELQ4 463 aaPredicted RBP8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 ZFYP08048 801 aaPredicted RBP8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 RILPL2Q969X0 211 aa8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 LRRC4BQ9NT99 713 aa8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 ZNF646O15015 1829 aaPredicted RBP8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 ZMYM6O95789 1325 aa8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 CCDC171Q6TFL3 1326 aa8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 IRS2Q9Y4H2 1338 aa8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 TM4SF1P30408 202 aa8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 CUL4AQ13619 759 aa8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 PUM3Q15397 648 aaKnown RBP8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 LPIN2Q92539 896 aa8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 ARHGEF1Q92888 912 aaKnown RBP8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 BSDC1Q9NW68 430 aaPredicted RBP8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 HMG20BQ9P0W2 317 aa8.27□□□□□ -1.09
CX3CR1-202ENST00000399220 CACNA1SQ13698 1873 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 UQCRFS1P1P0C7P4 283 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 GPTP24298 496 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 LRRFIP1Q32MZ4 808 aaKnown RBP8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 ZMYM1Q5SVZ6 1142 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 TBC1D9BQ66K14 1250 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 C15orf52Q6ZUT6 534 aaKnown RBP8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 HSCBQ8IWL3 235 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 AKT1S1Q96B36 256 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 XAGE2Q96GT9 111 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 ZNF594Q96JF6 807 aaPredicted RBP8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 TAF1P21675 1872 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 CCDC88AQ3V6T2 1871 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 SYNE4Q8N205 404 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 FBXL16Q8N461 479 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 TTC14Q96N46 770 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 DIAPH3Q9NSV4 1193 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 PAG1Q9NWQ8 432 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 CHD4Q14839 1912 aa8.26□□□□□ -1.09
CX3CR1-202ENST00000399220 COL11A2P13942 1736 aaPredicted RBP8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 INTS4Q96HW7 963 aaKnown RBP8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 DSCC1Q9BVC3 393 aa8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 LAMB1P07942 1786 aa8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 TAF5LO75529 589 aa8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 NMIQ13287 307 aaPredicted RBP8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 TTF1Q15361 905 aaPredicted RBP8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 ATP2B3Q16720 1220 aa8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 CRY2Q49AN0 593 aa8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 CCDC158Q5M9N0 1113 aa8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 TRAPPC3LQ5T215 181 aa8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 LDHAL6AQ6ZMR3 332 aa8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 ST18O60284 1047 aa8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 ZSWIM6Q9HCJ5 1215 aa8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 SNX14Q9Y5W7 946 aa8.25□□□□□ -1.09
CX3CR1-202ENST00000399220 SEMA3EO15041 775 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 GNPATO15228 680 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 UBE4AQ14139 1066 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 ERFEQ4G0M1 354 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 MCMDC2Q4G0Z9 681 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 AMIGO3Q86WK7 504 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 PROM2Q8N271 834 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 FLAD1Q8NFF5 587 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 BOLA2Q9H3K6 86 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 CWC22Q9HCG8 908 aaKnown RBP8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 FOCADQ5VW36 1801 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 ZPR1O75312 459 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 TPTE2Q6XPS3 522 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 SETDB2Q96T68 719 aa8.24□□□□□ -1.09
CX3CR1-202ENST00000399220 A0A0D9SFI3 127 aa8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 RNF113AO15541 343 aaKnown RBP8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 CD2BP2O95400 341 aaKnown RBP8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 IFIT1P09914 478 aaKnown RBP8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 TIMM10P62072 90 aa8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 UBE3CQ15386 1083 aa8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 METTL24Q5JXM2 366 aa8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 FSD1Q9BTV5 496 aa8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 CHMP5Q9NZZ3 219 aa8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 DAXXQ9UER7 740 aaPredicted RBP8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 PALD1Q9ULE6 856 aa8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 DDX60LQ5H9U9 1706 aaKnown RBP8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 CYP2E1P05181 493 aaPredicted RBP8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 HOXA10P31260 410 aaPredicted RBP8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 IGHMBP2P38935 993 aaKnown RBP8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 VPS53Q5VIR6 699 aa8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 ZSCAN25Q6NSZ9 544 aa8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 ANO2Q9NQ90 1003 aa8.23□□□□□ -1.09
CX3CR1-202ENST00000399220 CHMP3Q9Y3E7 222 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms