RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 GPSM2P81274 684 aa21.65■■□□□ 1.06
CSNK1D-204ENST00000398519 ATP8B2P98198 1209 aa21.65■■□□□ 1.06
CSNK1D-204ENST00000398519 GRIPAP1Q4V328 841 aa21.65■■□□□ 1.06
CSNK1D-204ENST00000398519 PUS3Q9BZE2 481 aaKnown RBP21.65■■□□□ 1.06
CSNK1D-204ENST00000398519 A0A1B0GUL6 1792 aa21.64■■□□□ 1.06
CSNK1D-204ENST00000398519 LTBP3Q9NS15 1303 aa21.64■■□□□ 1.05
CSNK1D-204ENST00000398519 MPNDQ8N594 471 aa21.64■■□□□ 1.05
CSNK1D-204ENST00000398519 TAOK3Q9H2K8 898 aa21.64■■□□□ 1.05
CSNK1D-204ENST00000398519 CNNM1Q9NRU3 951 aa21.64■■□□□ 1.05
CSNK1D-204ENST00000398519 NSFL1CQ9UNZ2 370 aaKnown RBP21.64■■□□□ 1.05
CSNK1D-204ENST00000398519 FKBP4Q02790 459 aaKnown RBP eCLIP21.63■■□□□ 1.055e-7■□□□□ 8.6
CSNK1D-204ENST00000398519 LRRC24Q50LG9 513 aa21.63■■□□□ 1.05
CSNK1D-204ENST00000398519 DPP8Q6V1X1 898 aaPredicted RBP21.63■■□□□ 1.05
CSNK1D-204ENST00000398519 PSMD1Q99460 953 aa21.63■■□□□ 1.05
CSNK1D-204ENST00000398519 PA2G4Q9UQ80 394 aaKnown RBP21.63■■□□□ 1.05
CSNK1D-204ENST00000398519 PRELPP51888 382 aa21.62■■□□□ 1.05
CSNK1D-204ENST00000398519 POLA2Q14181 598 aa21.62■■□□□ 1.05
CSNK1D-204ENST00000398519 SSH3Q8TE77 659 aa21.62■■□□□ 1.05
CSNK1D-204ENST00000398519 COPRSQ9NQ92 184 aa21.62■■□□□ 1.05
CSNK1D-204ENST00000398519 PODXL2Q9NZ53 605 aa21.62■■□□□ 1.05
CSNK1D-204ENST00000398519 IRX6P78412 446 aaPredicted RBP21.61■■□□□ 1.05
CSNK1D-204ENST00000398519 CHRNDQ07001 517 aa21.61■■□□□ 1.05
CSNK1D-204ENST00000398519 RTFDC1Q9BY42 306 aaPredicted RBP21.61■■□□□ 1.05
CSNK1D-204ENST00000398519 ANKIB1Q9P2G1 1089 aa21.61■■□□□ 1.05
CSNK1D-204ENST00000398519 RIPOR2Q9Y4F9 1068 aa21.61■■□□□ 1.05
CSNK1D-204ENST00000398519 XDHP47989 1333 aa21.61■■□□□ 1.05
CSNK1D-204ENST00000398519 SIL1Q9H173 461 aa21.61■■□□□ 1.05
CSNK1D-204ENST00000398519 SBF1O95248 1867 aa21.6■■□□□ 1.05
CSNK1D-204ENST00000398519 EYA2O00167 538 aa21.6■■□□□ 1.05
CSNK1D-204ENST00000398519 SIRT2Q8IXJ6 389 aa21.6■■□□□ 1.05
CSNK1D-204ENST00000398519 RPAP2Q8IXW5 612 aaPredicted RBP21.6■■□□□ 1.05
CSNK1D-204ENST00000398519 EXOC6Q8TAG9 804 aa21.6■■□□□ 1.05
CSNK1D-204ENST00000398519 ZNF277Q9NRM2 450 aaPredicted RBP21.6■■□□□ 1.05
CSNK1D-204ENST00000398519 POLLQ9UGP5 575 aa21.6■■□□□ 1.05
CSNK1D-204ENST00000398519 ATG9AQ7Z3C6 839 aa21.59■■□□□ 1.05
CSNK1D-204ENST00000398519 TBC1D16Q8TBP0 767 aa21.59■■□□□ 1.05
CSNK1D-204ENST00000398519 ANKRD2Q9GZV1 360 aa21.59■■□□□ 1.05
CSNK1D-204ENST00000398519 MROH5Q6ZUA9 1318 aa21.59■■□□□ 1.05
CSNK1D-204ENST00000398519 WTIPA6NIX2 430 aaPredicted RBP21.58■■□□□ 1.05
CSNK1D-204ENST00000398519 CIAO1O76071 339 aa21.58■■□□□ 1.05
CSNK1D-204ENST00000398519 HELBQ8NG08 1087 aaPredicted RBP21.58■■□□□ 1.05
CSNK1D-204ENST00000398519 GGA1Q9UJY5 639 aa21.58■■□□□ 1.05
CSNK1D-204ENST00000398519 FBXO3Q9UK99 471 aa21.58■■□□□ 1.05
CSNK1D-204ENST00000398519 TAF5LO75529 589 aa21.57■■□□□ 1.04
CSNK1D-204ENST00000398519 UFL1O94874 794 aa21.57■■□□□ 1.04
CSNK1D-204ENST00000398519 LMNB1P20700 586 aa21.57■■□□□ 1.04
CSNK1D-204ENST00000398519 SUPT20HQ8NEM7 779 aa21.57■■□□□ 1.04
CSNK1D-204ENST00000398519 CCDC88AQ3V6T2 1871 aa21.57■■□□□ 1.04
CSNK1D-204ENST00000398519 C6orf229H3BNL8 230 aa21.57■■□□□ 1.04
CSNK1D-204ENST00000398519 VGLL2Q8N8G2 317 aa21.57■■□□□ 1.04
CSNK1D-204ENST00000398519 GPR101Q96P66 508 aaPredicted RBP21.57■■□□□ 1.04
CSNK1D-204ENST00000398519 PCDHB15Q9Y5E8 787 aa21.57■■□□□ 1.04
CSNK1D-204ENST00000398519 COL4A5P29400 1685 aa21.56■■□□□ 1.04
CSNK1D-204ENST00000398519 ATP2B4P23634 1241 aa21.56■■□□□ 1.04
CSNK1D-204ENST00000398519 IARSP41252 1262 aaKnown RBP21.56■■□□□ 1.04
CSNK1D-204ENST00000398519 METTL24Q5JXM2 366 aa21.56■■□□□ 1.04
CSNK1D-204ENST00000398519 SNAP23O00161 211 aa21.55■■□□□ 1.04
CSNK1D-204ENST00000398519 IL15P40933 162 aaPredicted RBP21.55■■□□□ 1.04
CSNK1D-204ENST00000398519 C9orf131Q5VYM1 1079 aa21.55■■□□□ 1.04
CSNK1D-204ENST00000398519 RNF181Q9P0P0 153 aa21.55■■□□□ 1.04
CSNK1D-204ENST00000398519 LEMD3Q9Y2U8 911 aa21.55■■□□□ 1.04
CSNK1D-204ENST00000398519 ZNF804BA4D1E1 1349 aa21.55■■□□□ 1.04
CSNK1D-204ENST00000398519 CHD4Q14839 1912 aa21.54■■□□□ 1.04
CSNK1D-204ENST00000398519 HMMRO75330 724 aa21.54■■□□□ 1.04
CSNK1D-204ENST00000398519 AAMPQ13685 434 aa21.54■■□□□ 1.04
CSNK1D-204ENST00000398519 AOC3Q16853 763 aa21.54■■□□□ 1.04
CSNK1D-204ENST00000398519 TIAM2Q8IVF5 1701 aa21.54■■□□□ 1.04
CSNK1D-204ENST00000398519 DICER1Q9UPY3 1922 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-204ENST00000398519 PPIP5K2O43314 1243 aa21.53■■□□□ 1.04
CSNK1D-204ENST00000398519 SURF6O75683 361 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-204ENST00000398519 PDE8BO95263 885 aa21.53■■□□□ 1.04
CSNK1D-204ENST00000398519 KIAA2012Q0VF49 1180 aa21.53■■□□□ 1.04
CSNK1D-204ENST00000398519 WASHC4Q2M389 1173 aa21.53■■□□□ 1.04
CSNK1D-204ENST00000398519 EYA3Q99504 573 aa21.53■■□□□ 1.04
CSNK1D-204ENST00000398519 VPS33BQ9H267 617 aa21.53■■□□□ 1.04
CSNK1D-204ENST00000398519 NOP58Q9Y2X3 529 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-204ENST00000398519 KCNJ4P48050 445 aa21.53■■□□□ 1.04
CSNK1D-204ENST00000398519 MED23Q9ULK4 1368 aa21.52■■□□□ 1.04
CSNK1D-204ENST00000398519 RIMBP2O15034 1052 aa21.52■■□□□ 1.04
CSNK1D-204ENST00000398519 KLRK1P26718 216 aa21.52■■□□□ 1.04
CSNK1D-204ENST00000398519 G3BP1Q13283 466 aaKnown RBP eCLIP21.52■■□□□ 1.04
CSNK1D-204ENST00000398519 LARGE2Q8N3Y3 721 aa21.52■■□□□ 1.04
CSNK1D-204ENST00000398519 IRS2Q9Y4H2 1338 aa21.52■■□□□ 1.03
CSNK1D-204ENST00000398519 EXOC6BQ9Y2D4 811 aa21.51■■□□□ 1.03
CSNK1D-204ENST00000398519 SASH1O94885 1247 aa21.5■■□□□ 1.03
CSNK1D-204ENST00000398519 UBE4AQ14139 1066 aa21.5■■□□□ 1.03
CSNK1D-204ENST00000398519 TXNRD3Q86VQ6 643 aa21.5■■□□□ 1.03
CSNK1D-204ENST00000398519 ZC3H12CQ9C0D7 883 aaKnown RBP21.5■■□□□ 1.03
CSNK1D-204ENST00000398519 CEP126Q9P2H0 1117 aa21.5■■□□□ 1.03
CSNK1D-204ENST00000398519 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.5■■□□□ 1.03
CSNK1D-204ENST00000398519 FGFR2P21802 821 aa21.49■■□□□ 1.03
CSNK1D-204ENST00000398519 TFCP2Q12800 502 aa21.49■■□□□ 1.03
CSNK1D-204ENST00000398519 PUM3Q15397 648 aaKnown RBP21.49■■□□□ 1.03
CSNK1D-204ENST00000398519 OS9Q13438 667 aaPredicted RBP21.48■■□□□ 1.03
CSNK1D-204ENST00000398519 C15orf52Q6ZUT6 534 aaKnown RBP21.48■■□□□ 1.03
CSNK1D-204ENST00000398519 JDP2Q8WYK2 163 aa21.48■■□□□ 1.03
CSNK1D-204ENST00000398519 DOK7Q18PE1 504 aa21.47■■□□□ 1.03
CSNK1D-204ENST00000398519 NIM1KQ8IY84 436 aa21.47■■□□□ 1.03
CSNK1D-204ENST00000398519 DBNDD1Q9H9R9 158 aa21.47■■□□□ 1.03
CSNK1D-204ENST00000398519 ZC3H4Q9UPT8 1303 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms