RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 RABL2BQ9UNT1 228 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 PPFIA2O75334 1257 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 GUCY2CP25092 1073 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 PCGF5Q86SE9 256 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 PHC3Q8NDX5 983 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 ATXN8OSP0DMR3 200 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 TNNT1P13805 278 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 CCDC15Q0P6D6 951 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 ZSCAN26Q16670 478 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 SSH1Q8WYL5 1049 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 CEP63Q96MT8 703 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 AGAP3Q96P47 875 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 SHANK3Q9BYB0 1731 aa7.75□□□□□ -1.17
TM9SF4-202ENST00000398022 ANKRD33BA6NCL7 494 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 SKOR2Q2VWA4 1001 aaPredicted RBP7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 CALCOCO1Q9P1Z2 691 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 ZC3H6P61129 1189 aaKnown RBP7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 PDAP1Q13442 181 aaKnown RBP7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 HDGFL2Q7Z4V5 671 aaPredicted RBP7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 TAX1BP1Q86VP1 789 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 DRC7Q8IY82 874 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 NOB1Q9ULX3 412 aaKnown RBP7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 RGPD5Q99666 1765 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 GOLGA6L6A8MZA4 724 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 DIAPH1O60610 1272 aaKnown RBP7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 GIGYF1O75420 1035 aaPredicted RBP7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 SKIV2LQ15477 1246 aaKnown RBP7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 TSNAXIP1Q2TAA8 658 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 ALDH1L2Q3SY69 923 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 NAALADL2Q58DX5 795 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 UBE2Q1Q7Z7E8 422 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 CABP2Q9NPB3 220 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 THRAP3Q9Y2W1 955 aaKnown RBP7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 ATAD2Q6PL18 1390 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 TUBGCP6Q96RT7 1819 aa7.74□□□□□ -1.17
TM9SF4-202ENST00000398022 ECEL1O95672 775 aa7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 CAND2O75155 1236 aa7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 TPPPO94811 219 aa7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 NUTM2DQ5VT03 806 aaPredicted RBP7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 C17orf50Q8WW18 174 aa7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 KIF2CQ99661 725 aa7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 G3BP2Q9UN86 482 aaKnown RBP7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 DYNC1I1O14576 645 aa7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 XRCC6P12956 609 aaKnown RBP eCLIP7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 SNX21Q969T3 373 aa7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 ODF2LQ9ULJ1 636 aa7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 PRR12Q9ULL5 1215 aa7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 TMA7Q9Y2S6 64 aaKnown RBP7.73□□□□□ -1.17
TM9SF4-202ENST00000398022 TMCO5BA8MYB1 307 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 RASSF7Q02833 373 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 SAFB2Q14151 953 aaKnown RBP eCLIP7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 TMEM57Q8N5G2 664 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 TAF4BQ92750 862 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 KCNB2Q92953 911 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 GCC1Q96CN9 775 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 PIK3C2AO00443 1686 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 FSD2A1L4K1 749 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 TRIM64CA6NLI5 447 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 HIP1RO75146 1068 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 CAPN15O75808 1086 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 FOSL1P15407 271 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 JAKMIP3Q5VZ66 844 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 LNPKQ9C0E8 428 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 GGNBP2Q9H3C7 697 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 CAMTA1Q9Y6Y1 1673 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 NOP2P46087 812 aaKnown RBP7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 BMS1Q14692 1282 aaKnown RBP7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 SOGA3Q5TF21 947 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 CCDC174Q6PII3 467 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 NYAP1Q6ZVC0 841 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 ZNF771Q7L3S4 317 aaPredicted RBP7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 CHD1LQ86WJ1 897 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 LMNTD2Q8IXW0 634 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 TEKT1Q969V4 418 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 SPACA7Q96KW9 195 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 ZBTB40Q9NUA8 1239 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 IRAK4Q9NWZ3 460 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 SFMBT1Q9UHJ3 866 aa7.72□□□□□ -1.17
TM9SF4-202ENST00000398022 OATP04181 439 aa7.71□□□□□ -1.17
TM9SF4-202ENST00000398022 FAM163BP0C2L3 166 aa7.71□□□□□ -1.17
TM9SF4-202ENST00000398022 CD53P19397 219 aa7.71□□□□□ -1.17
TM9SF4-202ENST00000398022 NUCB1Q02818 461 aa7.71□□□□□ -1.17
TM9SF4-202ENST00000398022 GAS2L2Q8NHY3 880 aa7.71□□□□□ -1.17
TM9SF4-202ENST00000398022 TBC1D22AQ8WUA7 517 aa7.71□□□□□ -1.17
TM9SF4-202ENST00000398022 ORAI2Q96SN7 254 aa7.71□□□□□ -1.17
TM9SF4-202ENST00000398022 MUC3BQ9H195 1237 aa7.71□□□□□ -1.17
TM9SF4-202ENST00000398022 QTRT2Q9H974 415 aaKnown RBP7.71□□□□□ -1.17
TM9SF4-202ENST00000398022 NOL7Q9UMY1 257 aaKnown RBP7.71□□□□□ -1.17
TM9SF4-202ENST00000398022 PPFIA3O75145 1194 aa7.71□□□□□ -1.18
TM9SF4-202ENST00000398022 XPCQ01831 940 aaPredicted RBP7.71□□□□□ -1.18
TM9SF4-202ENST00000398022 COL19A1Q14993 1142 aa7.71□□□□□ -1.18
TM9SF4-202ENST00000398022 BMP2KLQ5H9B9 411 aa7.71□□□□□ -1.18
TM9SF4-202ENST00000398022 NAP1L4Q99733 375 aaKnown RBP7.71□□□□□ -1.18
TM9SF4-202ENST00000398022 IQCGQ9H095 443 aaKnown RBP7.71□□□□□ -1.18
TM9SF4-202ENST00000398022 TULP4Q9NRJ4 1543 aa7.71□□□□□ -1.18
TM9SF4-202ENST00000398022 SHTN1A0MZ66 631 aa7.71□□□□□ -1.18
TM9SF4-202ENST00000398022 FCHSD2O94868 740 aa7.71□□□□□ -1.18
TM9SF4-202ENST00000398022 OTUD6AQ7L8S5 288 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms