RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 ZNF853P0CG23 659 aa13.46□□□□□ -0.26
PUM3-202ENST00000397885 HSPA4P34932 840 aa13.46□□□□□ -0.26
PUM3-202ENST00000397885 DNM1Q05193 864 aaKnown RBP13.46□□□□□ -0.26
PUM3-202ENST00000397885 CT47A1Q5JQC4 288 aaPredicted RBP13.46□□□□□ -0.26
PUM3-202ENST00000397885 LIMCH1Q9UPQ0 1083 aa13.46□□□□□ -0.26
PUM3-202ENST00000397885 TTC21AQ8NDW8 1320 aa13.46□□□□□ -0.26
PUM3-202ENST00000397885 CPSF1Q10570 1443 aaKnown RBP13.45□□□□□ -0.26
PUM3-202ENST00000397885 EFCAB8A8MWE9 144 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 EVA1CP58658 441 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 KRT85P78386 507 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 NOL8Q76FK4 1167 aaKnown RBP13.45□□□□□ -0.26
PUM3-202ENST00000397885 KRT27Q7Z3Y8 459 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 PACS2Q86VP3 889 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 PHACTR3Q96KR7 559 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 MED4Q9NPJ6 270 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 MTMR6Q9Y217 621 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 EXOC6BQ9Y2D4 811 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 SLIT3O75094 1523 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 HMMRO75330 724 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 FAM98CQ17RN3 349 aaKnown RBP13.45□□□□□ -0.26
PUM3-202ENST00000397885 TSPYL6Q8N831 410 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 CLSTN2Q9H4D0 955 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 ANO2Q9NQ90 1003 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 IMPACTQ9P2X3 320 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 MKRN1Q9UHC7 482 aaKnown RBP13.45□□□□□ -0.26
PUM3-202ENST00000397885 PHLPP2Q6ZVD8 1323 aa13.45□□□□□ -0.26
PUM3-202ENST00000397885 TUBGCP6Q96RT7 1819 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 PIK3C2AO00443 1686 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 A0A0G2JS52 829 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 CCP110O43303 1012 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 TBC1D8O95759 1140 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 CHMLP26374 656 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 IL13P35225 146 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 TSGA10IPQ3SY00 556 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 TTC14Q96N46 770 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 THUMPD2Q9BTF0 503 aaKnown RBP13.44□□□□□ -0.26
PUM3-202ENST00000397885 UPF3BQ9BZI7 483 aaKnown RBP13.44□□□□□ -0.26
PUM3-202ENST00000397885 ADAM21Q9UKJ8 722 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 LMO7Q8WWI1 1683 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 MON2Q7Z3U7 1717 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 GOLGA6L19H0YKK7 550 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 MCTP2Q6DN12 878 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 MSL3Q8N5Y2 521 aaKnown RBP13.44□□□□□ -0.26
PUM3-202ENST00000397885 STRN4Q9NRL3 753 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 SPATA31A1Q5TZJ5 1347 aa13.44□□□□□ -0.26
PUM3-202ENST00000397885 NPHP1O15259 732 aa13.43□□□□□ -0.26
PUM3-202ENST00000397885 DRC1Q96MC2 740 aa13.43□□□□□ -0.26
PUM3-202ENST00000397885 OSBPL5Q9H0X9 879 aaPredicted RBP13.43□□□□□ -0.26
PUM3-202ENST00000397885 CXorf56Q9H5V9 222 aa13.43□□□□□ -0.26
PUM3-202ENST00000397885 CORO7P57737 925 aa13.42□□□□□ -0.26
PUM3-202ENST00000397885 SATB1Q01826 763 aa13.42□□□□□ -0.26
PUM3-202ENST00000397885 DHX37Q8IY37 1157 aaKnown RBP13.42□□□□□ -0.26
PUM3-202ENST00000397885 KCNH5Q8NCM2 988 aa13.42□□□□□ -0.26
PUM3-202ENST00000397885 SALL3Q9BXA9 1300 aa13.42□□□□□ -0.26
PUM3-202ENST00000397885 SCAND2PQ9GZW5 306 aaPredicted RBP13.42□□□□□ -0.26
PUM3-202ENST00000397885 CAMTA1Q9Y6Y1 1673 aa13.42□□□□□ -0.26
PUM3-202ENST00000397885 DLG5Q8TDM6 1919 aa13.42□□□□□ -0.26
PUM3-202ENST00000397885 THSD7AQ9UPZ6 1657 aa13.42□□□□□ -0.26
PUM3-202ENST00000397885 ELL2O00472 640 aaPredicted RBP13.42□□□□□ -0.26
PUM3-202ENST00000397885 IQCB1Q15051 598 aa13.42□□□□□ -0.26
PUM3-202ENST00000397885 CC2D1AQ6P1N0 951 aaPredicted RBP13.42□□□□□ -0.26
PUM3-202ENST00000397885 MMS22LQ6ZRQ5 1243 aa13.42□□□□□ -0.26
PUM3-202ENST00000397885 GPR161Q8N6U8 529 aaKnown RBP13.42□□□□□ -0.26
PUM3-202ENST00000397885 TRMT1Q9NXH9 659 aaKnown RBP13.42□□□□□ -0.26
PUM3-202ENST00000397885 EMILIN1Q9Y6C2 1016 aa13.42□□□□□ -0.26
PUM3-202ENST00000397885 EIF3CLB5ME19 914 aaKnown RBP13.41□□□□□ -0.26
PUM3-202ENST00000397885 NRDCO43847 1150 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 TADA3O75528 432 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 LIG1P18858 919 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 JAKMIP3Q5VZ66 844 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 TTC6Q86TZ1 520 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 GPATCH11Q8N954 259 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 PPP1R13BQ96KQ4 1090 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 ZSCAN31Q96LW9 406 aaPredicted RBP13.41□□□□□ -0.26
PUM3-202ENST00000397885 EIF3CQ99613 913 aaKnown RBP13.41□□□□□ -0.26
PUM3-202ENST00000397885 TOMM22Q9NS69 142 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 TTC41PQ6P2S7 1318 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 CCDC196A0A1B0GTZ2 297 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 LMAN1P49257 510 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 SF3B2Q13435 895 aaKnown RBP13.41□□□□□ -0.26
PUM3-202ENST00000397885 EFCAB13Q8IY85 973 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 CCDC150Q8NCX0 1101 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 COG3Q96JB2 828 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 ARFGAP3Q9NP61 516 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 SH2B1Q9NRF2 756 aaPredicted RBP13.41□□□□□ -0.26
PUM3-202ENST00000397885 DACT1Q9NYF0 836 aa13.41□□□□□ -0.26
PUM3-202ENST00000397885 SASH3O75995 380 aa13.4□□□□□ -0.26
PUM3-202ENST00000397885 PRR29P0C7W0 189 aa13.4□□□□□ -0.26
PUM3-202ENST00000397885 ETF1P62495 437 aaKnown RBP13.4□□□□□ -0.26
PUM3-202ENST00000397885 CAMK4Q16566 473 aa13.4□□□□□ -0.26
PUM3-202ENST00000397885 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
PUM3-202ENST00000397885 TACO1Q9BSH4 297 aaKnown RBP13.4□□□□□ -0.26
PUM3-202ENST00000397885 DNAI1Q9UI46 699 aa13.4□□□□□ -0.26
PUM3-202ENST00000397885 KCNG1Q9UIX4 513 aa13.4□□□□□ -0.26
PUM3-202ENST00000397885 AOX1Q06278 1338 aa13.4□□□□□ -0.26
PUM3-202ENST00000397885 TRDNQ13061 729 aa13.4□□□□□ -0.26
PUM3-202ENST00000397885 ZRSR1Q15695 479 aaKnown RBP13.4□□□□□ -0.26
PUM3-202ENST00000397885 LRRFIP1Q32MZ4 808 aaKnown RBP13.4□□□□□ -0.26
PUM3-202ENST00000397885 E4F1Q66K89 784 aaPredicted RBP13.4□□□□□ -0.26
PUM3-202ENST00000397885 CKAP2LQ8IYA6 745 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms