RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 NBPF6Q5VWK0 638 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 KSR2Q6VAB6 950 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 UBE3BQ7Z3V4 1068 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 MAATS1Q7Z4T9 603 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 NBPF5PQ86XG9 351 aaPredicted RBP7.11□□□□□ -1.27
PGBD4-201ENST00000397766 PI4KAP1Q8N8J0 262 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 NBPF4Q96M43 638 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 CEP63Q96MT8 703 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 KRT83P78385 493 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 ZSCAN23Q3MJ62 389 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 ANKRD44Q8N8A2 993 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 POLR3AO14802 1390 aaPredicted RBP7.11□□□□□ -1.27
PGBD4-201ENST00000397766 CTAGE15A4D2H0 777 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 PSMA7O14818 248 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 CTAGE8P0CG41 777 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 HSPA2P54652 639 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 ATP2B3Q16720 1220 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 GRIPAP1Q4V328 841 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 RNF187Q5TA31 235 aaPredicted RBP7.11□□□□□ -1.27
PGBD4-201ENST00000397766 ATL3Q6DD88 541 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 CTAGE6Q86UF2 777 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 CTAGE4Q8IX94 777 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 TMX3Q96JJ7 454 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 UTP14AQ9BVJ6 771 aaKnown RBP7.11□□□□□ -1.27
PGBD4-201ENST00000397766 JADE2Q9NQC1 790 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 SLC4A4Q9Y6R1 1079 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 AKR1B10O60218 316 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 GPTP24298 496 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 PPP1R2P41236 205 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 NOP2P46087 812 aaKnown RBP7.11□□□□□ -1.27
PGBD4-201ENST00000397766 GRM1Q13255 1194 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 TMEM87AQ8NBN3 555 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 FAM200AQ8TCP9 573 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 ESYT1Q9BSJ8 1104 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 ALG1Q9BT22 464 aa7.11□□□□□ -1.27
PGBD4-201ENST00000397766 MACROD2A1Z1Q3 448 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 OPA1O60313 960 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 TTC14Q96N46 770 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 BCCIPQ9P287 314 aaKnown RBP eCLIP7.1□□□□□ -1.27
PGBD4-201ENST00000397766 SSX2IPQ9Y2D8 614 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 SAMM50Q9Y512 469 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 CCDC82Q8N4S0 544 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 MRPL50Q8N5N7 158 aaKnown RBP7.1□□□□□ -1.27
PGBD4-201ENST00000397766 ANKRD2Q9GZV1 360 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 PPIP5K1Q6PFW1 1433 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 FOXO3O43524 673 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 TACC1O75410 805 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 CYP7A1P22680 504 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 UBE4AQ14139 1066 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 SPATA24Q86W54 205 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 MSANTD4Q8NCY6 345 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 ZCRB1Q8TBF4 217 aaKnown RBP7.1□□□□□ -1.27
PGBD4-201ENST00000397766 BRF1Q92994 677 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 C16orf45Q96MC5 204 aaPredicted RBP7.1□□□□□ -1.27
PGBD4-201ENST00000397766 SPAG5Q96R06 1193 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 RBM28Q9NW13 759 aaKnown RBP7.1□□□□□ -1.27
PGBD4-201ENST00000397766 ZRANB1Q9UGI0 708 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 URB2Q14146 1524 aaKnown RBP7.1□□□□□ -1.27
PGBD4-201ENST00000397766 UBASH3AP57075 661 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 RNF113AO15541 343 aaKnown RBP7.1□□□□□ -1.27
PGBD4-201ENST00000397766 PDE1AP54750 535 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 GNG11P61952 73 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 COMMD10Q9Y6G5 202 aa7.1□□□□□ -1.27
PGBD4-201ENST00000397766 BICRAQ9NZM4 1560 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 NPHP3Q7Z494 1330 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 BIN1O00499 593 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 ATP2A1O14983 1001 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 F13A1P00488 732 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 LIG1P18858 919 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 LMAN1P49257 510 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 BRAPQ7Z569 592 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 APBB1IPQ7Z5R6 666 aaPredicted RBP7.09□□□□□ -1.27
PGBD4-201ENST00000397766 RRP36Q96EU6 259 aaKnown RBP7.09□□□□□ -1.27
PGBD4-201ENST00000397766 TUBBP07437 444 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 IVLP07476 585 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 PRPF4BQ13523 1007 aaKnown RBP7.09□□□□□ -1.27
PGBD4-201ENST00000397766 SMARCC2Q8TAQ2 1214 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 PKNOX2Q96KN3 472 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 TRMT1Q9NXH9 659 aaKnown RBP7.09□□□□□ -1.27
PGBD4-201ENST00000397766 STK24Q9Y6E0 443 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 UHRF1BP1LA0JNW5 1464 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 MAGEB6P1A0A0J9YX57 407 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 WDR78Q5VTH9 848 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 NAA16Q6N069 864 aaPredicted RBP7.09□□□□□ -1.27
PGBD4-201ENST00000397766 GRM8O00222 908 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 KRT2P35908 639 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 SETDB2Q96T68 719 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 IMPG2Q9BZV3 1241 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 RBM8AQ9Y5S9 174 aaKnown RBP7.09□□□□□ -1.27
PGBD4-201ENST00000397766 ITSN2Q9NZM3 1697 aa7.09□□□□□ -1.27
PGBD4-201ENST00000397766 RTL1A6NKG5 1358 aa7.09□□□□□ -1.28
PGBD4-201ENST00000397766 FLT4P35916 1363 aa7.09□□□□□ -1.28
PGBD4-201ENST00000397766 TRPM2O94759 1503 aa7.09□□□□□ -1.28
PGBD4-201ENST00000397766 SDSP20132 328 aa7.09□□□□□ -1.28
PGBD4-201ENST00000397766 SYNCQ9H7C4 482 aa7.09□□□□□ -1.28
PGBD4-201ENST00000397766 VAT1LQ9HCJ6 419 aa7.09□□□□□ -1.28
PGBD4-201ENST00000397766 BABAM1Q9NWV8 329 aa7.09□□□□□ -1.28
PGBD4-201ENST00000397766 TFIP11Q9UBB9 837 aaKnown RBP7.09□□□□□ -1.28
PGBD4-201ENST00000397766 PLCH2O75038 1416 aa7.09□□□□□ -1.28
PGBD4-201ENST00000397766 NCKAP5LQ9HCH0 1330 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms